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The map label for this gene is yfmJ [H]

Identifier: 154685223

GI number: 154685223

Start: 758637

End: 759656

Strand: Reverse

Name: yfmJ [H]

Synonym: RBAM_007690

Alternate gene names: 154685223

Gene position: 759656-758637 (Counterclockwise)

Preceding gene: 154685224

Following gene: 154685221

Centisome position: 19.39

GC content: 50.49

Gene sequence:

>1020_bases
ATGCCGAATCATCAGCAGCAAATTCAATTGGCAAGACGCCCCAAAGGCGTTCCCGCCCATGACGATTTCCGCTTTGAAAC
GATTGCCGTGCCCGAACCGAAAGACGGCGAAGTGCTTGTGAAAACGAGTTATGTGTCCGTTGATCCGTACATGCGCGGAC
GGATGCAGGATACAAAATCATATGTAGAGCCGTTCGCTTTAGATGAAGCCATAACAGGCGGAGTGATTGCCGAGGTTCTG
ACAGACGGCGATAAGCTGAAAAAAGGAGATGTTGTGATCGGAAATCTCGCGTGGCAGGAATATTCAGCCGTCAATGAGTC
CGCCCTCCGCAAGTTGGATACGGATATCGCACCCGCCCAGGCGTATCTCGGCATTTTAGGGATGACCGGACTGACCGCTT
ACTTCGGGCTGCTCGATATCGGCCGTCCGAAAAAAGGCGAAACCGTCGTCGTTTCAGGCGCGGCGGGCGCCGTCGGCTCA
ACAGTCGGACAGATTGCCAAAATCAAAGGCGCGCGGGTTGTCGGCATCGCCGGATCTGATGAAAAAATCGCGTATTTGAA
AGAGGAGCTTCAATTTGATGAAGCCATTAATTACAAAACGGCGGATGATATTCAAAAAGCGCTGGAACAGGCATGTCCTG
ACGGCGTCGATGTCTATTTTGACAATGTCGGCGGACCGATTTCAGATGCGGTGATAAACCTGCTGAATGAATTCGCCCGC
ATTTCGGTATGCGGAGCGATCTCATCGTACAATACCGAAAGTGAAGAAGAAGACATGGGCCCCCGCGTCCAGCCGAAGCT
GATCAAAACAAAAGCGCTGATGCAGGGATTCATCGTCAGTGATTATGCTGACCGCTTTTCCGAAGGTGCGAAACAATTGG
CCGAATGGCTTAAGGACGGAAAGCTTCATTATGAAGAAACGATTACGGAAGGATTCAGCAATATTCCTGACGCGTTCCTC
GGCCTGTTTAAAGGAGAAAACAAAGGCAAACAGATCATCAAAGTCAGTGATCCAAGTTAA

Upstream 100 bases:

>100_bases
GGCCCTTCTTTTTTTATGACCGCTGACGGTTTGATTTTGTAATCGGGAAATGGTTCGTGTTACATTTGGAACAACCACTT
ATCTTGAAGGAGGATTCAGT

Downstream 100 bases:

>100_bases
CATGATGATGACAAAAAGGAGGGCTTTGTCCCCTCCTTTTCTTCTTTTTCGGATCAGCCGCGAAGAATCAAAGTAAGAAA
GCCGTCTTCACCAGGCTCCG

Product: YfmJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MPNHQQQIQLARRPKGVPAHDDFRFETIAVPEPKDGEVLVKTSYVSVDPYMRGRMQDTKSYVEPFALDEAITGGVIAEVL
TDGDKLKKGDVVIGNLAWQEYSAVNESALRKLDTDIAPAQAYLGILGMTGLTAYFGLLDIGRPKKGETVVVSGAAGAVGS
TVGQIAKIKGARVVGIAGSDEKIAYLKEELQFDEAINYKTADDIQKALEQACPDGVDVYFDNVGGPISDAVINLLNEFAR
ISVCGAISSYNTESEEEDMGPRVQPKLIKTKALMQGFIVSDYADRFSEGAKQLAEWLKDGKLHYEETITEGFSNIPDAFL
GLFKGENKGKQIIKVSDPS

Sequences:

>Translated_339_residues
MPNHQQQIQLARRPKGVPAHDDFRFETIAVPEPKDGEVLVKTSYVSVDPYMRGRMQDTKSYVEPFALDEAITGGVIAEVL
TDGDKLKKGDVVIGNLAWQEYSAVNESALRKLDTDIAPAQAYLGILGMTGLTAYFGLLDIGRPKKGETVVVSGAAGAVGS
TVGQIAKIKGARVVGIAGSDEKIAYLKEELQFDEAINYKTADDIQKALEQACPDGVDVYFDNVGGPISDAVINLLNEFAR
ISVCGAISSYNTESEEEDMGPRVQPKLIKTKALMQGFIVSDYADRFSEGAKQLAEWLKDGKLHYEETITEGFSNIPDAFL
GLFKGENKGKQIIKVSDPS
>Mature_338_residues
PNHQQQIQLARRPKGVPAHDDFRFETIAVPEPKDGEVLVKTSYVSVDPYMRGRMQDTKSYVEPFALDEAITGGVIAEVLT
DGDKLKKGDVVIGNLAWQEYSAVNESALRKLDTDIAPAQAYLGILGMTGLTAYFGLLDIGRPKKGETVVVSGAAGAVGST
VGQIAKIKGARVVGIAGSDEKIAYLKEELQFDEAINYKTADDIQKALEQACPDGVDVYFDNVGGPISDAVINLLNEFARI
SVCGAISSYNTESEEEDMGPRVQPKLIKTKALMQGFIVSDYADRFSEGAKQLAEWLKDGKLHYEETITEGFSNIPDAFLG
LFKGENKGKQIIKVSDPS

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=330, Percent_Identity=42.7272727272727, Blast_Score=251, Evalue=7e-67,
Organism=Homo sapiens, GI226059133, Length=330, Percent_Identity=42.7272727272727, Blast_Score=251, Evalue=7e-67,
Organism=Homo sapiens, GI226246682, Length=345, Percent_Identity=40.8695652173913, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI226246680, Length=345, Percent_Identity=40.8695652173913, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI22748929, Length=345, Percent_Identity=40.8695652173913, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI226056130, Length=302, Percent_Identity=41.0596026490066, Blast_Score=208, Evalue=6e-54,
Organism=Homo sapiens, GI28557745, Length=349, Percent_Identity=30.0859598853868, Blast_Score=121, Evalue=9e-28,
Organism=Homo sapiens, GI194239674, Length=302, Percent_Identity=26.158940397351, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI13236495, Length=302, Percent_Identity=26.158940397351, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI194239676, Length=161, Percent_Identity=32.9192546583851, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI226510941, Length=331, Percent_Identity=45.3172205438066, Blast_Score=295, Evalue=4e-81,
Organism=Caenorhabditis elegans, GI133901712, Length=358, Percent_Identity=35.7541899441341, Blast_Score=204, Evalue=7e-53,
Organism=Caenorhabditis elegans, GI133901710, Length=358, Percent_Identity=35.7541899441341, Blast_Score=203, Evalue=9e-53,
Organism=Saccharomyces cerevisiae, GI6323504, Length=324, Percent_Identity=32.7160493827161, Blast_Score=138, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6319520, Length=231, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36773; Mature: 36642

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00775 GLYCOSYL_HYDROL_F3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNHQQQIQLARRPKGVPAHDDFRFETIAVPEPKDGEVLVKTSYVSVDPYMRGRMQDTKS
CCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEECHHHHCCHHHHHH
YVEPFALDEAITGGVIAEVLTDGDKLKKGDVVIGNLAWQEYSAVNESALRKLDTDIAPAQ
HHCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHH
AYLGILGMTGLTAYFGLLDIGRPKKGETVVVSGAAGAVGSTVGQIAKIKGARVVGIAGSD
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCC
EKIAYLKEELQFDEAINYKTADDIQKALEQACPDGVDVYFDNVGGPISDAVINLLNEFAR
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHH
ISVCGAISSYNTESEEEDMGPRVQPKLIKTKALMQGFIVSDYADRFSEGAKQLAEWLKDG
HHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KLHYEETITEGFSNIPDAFLGLFKGENKGKQIIKVSDPS
CCHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEECCCC
>Mature Secondary Structure 
PNHQQQIQLARRPKGVPAHDDFRFETIAVPEPKDGEVLVKTSYVSVDPYMRGRMQDTKS
CCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEECHHHHCCHHHHHH
YVEPFALDEAITGGVIAEVLTDGDKLKKGDVVIGNLAWQEYSAVNESALRKLDTDIAPAQ
HHCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHH
AYLGILGMTGLTAYFGLLDIGRPKKGETVVVSGAAGAVGSTVGQIAKIKGARVVGIAGSD
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCC
EKIAYLKEELQFDEAINYKTADDIQKALEQACPDGVDVYFDNVGGPISDAVINLLNEFAR
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHH
ISVCGAISSYNTESEEEDMGPRVQPKLIKTKALMQGFIVSDYADRFSEGAKQLAEWLKDG
HHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KLHYEETITEGFSNIPDAFLGLFKGENKGKQIIKVSDPS
CCHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]