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The map label for this gene is yfmM [H]

Identifier: 154685221

GI number: 154685221

Start: 755208

End: 756764

Strand: Reverse

Name: yfmM [H]

Synonym: RBAM_007660

Alternate gene names: 154685221

Gene position: 756764-755208 (Counterclockwise)

Preceding gene: 154685223

Following gene: 154685217

Centisome position: 19.31

GC content: 48.49

Gene sequence:

>1557_bases
ATGAGTATTTTATCCGTAAAAGATTTAAGCCACGGCTTTGGTGACCGTGCGCTTTTTAACAATGTATCGTTCCGTCTTTT
AAAAGGGGAACACGTCGGCTTAATCGGAGCAAACGGCGAAGGTAAATCAACGTTTATGAATATTATTACCGGAAAGCTTG
AGCCTGATGAGGGTAAGGTTGAATGGGCGAAAAACGTGCGCGTCGGCTACCTCGATCAGCATACCGTGCTTGAAAAAGGA
AAAACGATCCGCGACGTGCTGAAAGATGCGTTCCATTACTTATTTGCGATGGAAGAGGAAATGAATGAGATTTACAACAA
AATGGGCGAAGCGGACCCTGATGAGCTTGAGCAGCTGCTTGAAGATGTCGGTGTCATTCAAGACGCCCTGACAAACAATG
ACTTCTACGTGATTGACAGCAAAGTTGAAGAAATCGCCCGCGGCCTCGGCCTGCAGGATGTCGGACTTGACCGCGACGTC
ACAGATTTAAGCGGCGGACAGCGGACGAAAGTGCTGCTCGCCAAACTGCTTTTGGAAAAACCGGAAATCCTTCTGTTGGA
CGAACCGACCAACTACCTTGATGAACAGCATATTGAATGGCTGAAACGCTATTTGCAGGAATATGAAAATGCGTTCATCT
TAATTTCTCACGACATTCCGTTTTTAAACAGCGTGATCAATTTGATTTATCATGTGGAAAATCAGGAGCTGACGCGTTAT
GTCGGCGACTACCATCAGTTTATGGAAGTATACGAAGTGAAAAAACAGCAGCTCGAAGCCGCCTATAAAAAACAGCAGCA
GGAAGTGGCTGAGCTGAAAGATTTCGTCGCCCGCAACAAAGCGCGCGTCAGCACGAGAAATATGGCGATGTCCCGCCAGA
AAAAGCTTGATAAGATGGATATGATCGAACTGGCGGCCGAAAAACCGAAACCGGAATTCCATTTCAAGCCTGCGAGAACG
TCAGGCAAGCTCATTTTTGAAACGAAGGACTTAGTCATCGGCTACGATACTCCGCTGTCACGCCCGCTCAATCTCAGAAT
GGAGCGCGGACAGAAAGTCGCCCTGTACGGCGCAAACGGCATCGGGAAGACGACGCTGTTAAAAAGCCTGCTCGGTGAAA
TCCAGCCGCTGGAAGGCACGGTGGAACGGGGCGAGCATCAATACACGGGCTATTTCGAGCAGGAAGTGAAAGAAACCAAT
AACAATACGTGCATCGAAGAAGTGTGGAGCGAATTTCCTTCCTTTACCCAGTACGAAATCCGCGCCGCCCTCGCCAAATG
CGGCCTGACGACCAAACACATTGAAAGCCGCGTCTCCGTTCTCAGCGGAGGAGAAAAAGCGAAGGTCAGACTGTGCAAGC
TGATCAATTCAGAAACAAACCTGCTCGTGCTTGACGAACCGACAAACCACCTGGATGTCGATGCGAAAGAAGAGCTGAAA
CGTGCGCTGAAAGAATACAAAGGCTCTATTCTGCTGATTTCCCACGAACCCGAGTTCTACATGGATATCGCGACGGAAAC
ATGGAATTGTGAATCTTGGACGACGAAAGTGCTGTAA

Upstream 100 bases:

>100_bases
TTCCTTCCAAGCCTTTTAACAAACGGTCTCCTCCTTTATAATCATAAATGAGAAAGACACATGATAAAAAAGCGTGTCTG
ATAACGATAGAGGTGTAATG

Downstream 100 bases:

>100_bases
ACACAAAAAGGAACTCCCGCCTGTGCGGAAGTTCCTTTTTTTCTTAATGTCCGGCTTTTATTCCGGCGAGATGTTTGCGT
CCCATGAGAAGGACAAGCAT

Product: YfmM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MSILSVKDLSHGFGDRALFNNVSFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKVEWAKNVRVGYLDQHTVLEKG
KTIRDVLKDAFHYLFAMEEEMNEIYNKMGEADPDELEQLLEDVGVIQDALTNNDFYVIDSKVEEIARGLGLQDVGLDRDV
TDLSGGQRTKVLLAKLLLEKPEILLLDEPTNYLDEQHIEWLKRYLQEYENAFILISHDIPFLNSVINLIYHVENQELTRY
VGDYHQFMEVYEVKKQQLEAAYKKQQQEVAELKDFVARNKARVSTRNMAMSRQKKLDKMDMIELAAEKPKPEFHFKPART
SGKLIFETKDLVIGYDTPLSRPLNLRMERGQKVALYGANGIGKTTLLKSLLGEIQPLEGTVERGEHQYTGYFEQEVKETN
NNTCIEEVWSEFPSFTQYEIRAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDVDAKEELK
RALKEYKGSILLISHEPEFYMDIATETWNCESWTTKVL

Sequences:

>Translated_518_residues
MSILSVKDLSHGFGDRALFNNVSFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKVEWAKNVRVGYLDQHTVLEKG
KTIRDVLKDAFHYLFAMEEEMNEIYNKMGEADPDELEQLLEDVGVIQDALTNNDFYVIDSKVEEIARGLGLQDVGLDRDV
TDLSGGQRTKVLLAKLLLEKPEILLLDEPTNYLDEQHIEWLKRYLQEYENAFILISHDIPFLNSVINLIYHVENQELTRY
VGDYHQFMEVYEVKKQQLEAAYKKQQQEVAELKDFVARNKARVSTRNMAMSRQKKLDKMDMIELAAEKPKPEFHFKPART
SGKLIFETKDLVIGYDTPLSRPLNLRMERGQKVALYGANGIGKTTLLKSLLGEIQPLEGTVERGEHQYTGYFEQEVKETN
NNTCIEEVWSEFPSFTQYEIRAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDVDAKEELK
RALKEYKGSILLISHEPEFYMDIATETWNCESWTTKVL
>Mature_517_residues
SILSVKDLSHGFGDRALFNNVSFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKVEWAKNVRVGYLDQHTVLEKGK
TIRDVLKDAFHYLFAMEEEMNEIYNKMGEADPDELEQLLEDVGVIQDALTNNDFYVIDSKVEEIARGLGLQDVGLDRDVT
DLSGGQRTKVLLAKLLLEKPEILLLDEPTNYLDEQHIEWLKRYLQEYENAFILISHDIPFLNSVINLIYHVENQELTRYV
GDYHQFMEVYEVKKQQLEAAYKKQQQEVAELKDFVARNKARVSTRNMAMSRQKKLDKMDMIELAAEKPKPEFHFKPARTS
GKLIFETKDLVIGYDTPLSRPLNLRMERGQKVALYGANGIGKTTLLKSLLGEIQPLEGTVERGEHQYTGYFEQEVKETNN
NTCIEEVWSEFPSFTQYEIRAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDVDAKEELKR
ALKEYKGSILLISHEPEFYMDIATETWNCESWTTKVL

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=521, Percent_Identity=27.447216890595, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI27881506, Length=535, Percent_Identity=29.9065420560748, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI10947137, Length=535, Percent_Identity=29.9065420560748, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI69354671, Length=520, Percent_Identity=29.2307692307692, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI10947135, Length=520, Percent_Identity=29.2307692307692, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI90421313, Length=154, Percent_Identity=30.5194805194805, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1787041, Length=508, Percent_Identity=35.0393700787402, Blast_Score=290, Evalue=1e-79,
Organism=Escherichia coli, GI1789751, Length=486, Percent_Identity=30.4526748971193, Blast_Score=252, Evalue=4e-68,
Organism=Escherichia coli, GI2367384, Length=503, Percent_Identity=30.8151093439364, Blast_Score=232, Evalue=5e-62,
Organism=Escherichia coli, GI1787182, Length=520, Percent_Identity=29.6153846153846, Blast_Score=214, Evalue=1e-56,
Organism=Escherichia coli, GI1789891, Length=278, Percent_Identity=25.1798561151079, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1788165, Length=187, Percent_Identity=28.8770053475936, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1789864, Length=239, Percent_Identity=28.8702928870293, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788225, Length=237, Percent_Identity=26.1603375527426, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1786975, Length=245, Percent_Identity=25.3061224489796, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787758, Length=169, Percent_Identity=27.810650887574, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=517, Percent_Identity=28.6266924564797, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17559834, Length=514, Percent_Identity=27.2373540856031, Blast_Score=211, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17553372, Length=523, Percent_Identity=29.4455066921606, Blast_Score=192, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI115535101, Length=292, Percent_Identity=24.3150684931507, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=529, Percent_Identity=31.1909262759924, Blast_Score=230, Evalue=4e-61,
Organism=Saccharomyces cerevisiae, GI6320874, Length=523, Percent_Identity=29.6367112810707, Blast_Score=207, Evalue=5e-54,
Organism=Saccharomyces cerevisiae, GI6325030, Length=401, Percent_Identity=27.6807980049875, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6324314, Length=394, Percent_Identity=25.1269035532995, Blast_Score=115, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6323278, Length=390, Percent_Identity=24.8717948717949, Blast_Score=107, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24666836, Length=523, Percent_Identity=29.4455066921606, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24641342, Length=523, Percent_Identity=29.8279158699809, Blast_Score=209, Evalue=4e-54,
Organism=Drosophila melanogaster, GI24642252, Length=529, Percent_Identity=27.4102079395085, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI18859989, Length=529, Percent_Identity=27.4102079395085, Blast_Score=202, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59263; Mature: 59132

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILSVKDLSHGFGDRALFNNVSFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKV
CCCEECCHHHCCCCCHHHHCCCEEEEEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCH
EWAKNVRVGYLDQHTVLEKGKTIRDVLKDAFHYLFAMEEEMNEIYNKMGEADPDELEQLL
HHHCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
EDVGVIQDALTNNDFYVIDSKVEEIARGLGLQDVGLDRDVTDLSGGQRTKVLLAKLLLEK
HHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCC
PEILLLDEPTNYLDEQHIEWLKRYLQEYENAFILISHDIPFLNSVINLIYHVENQELTRY
CCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHH
VGDYHQFMEVYEVKKQQLEAAYKKQQQEVAELKDFVARNKARVSTRNMAMSRQKKLDKMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHH
MIELAAEKPKPEFHFKPARTSGKLIFETKDLVIGYDTPLSRPLNLRMERGQKVALYGANG
HHHHHHCCCCCCEEECCCCCCCEEEEEECCEEEECCCCCCCCCCHHCCCCCEEEEEECCC
IGKTTLLKSLLGEIQPLEGTVERGEHQYTGYFEQEVKETNNNTCIEEVWSEFPSFTQYEI
CCHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
RAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDVDAKEELK
HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHH
RALKEYKGSILLISHEPEFYMDIATETWNCESWTTKVL
HHHHHHCCCEEEEECCCCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SILSVKDLSHGFGDRALFNNVSFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKV
CCEECCHHHCCCCCHHHHCCCEEEEEECCEEEEEECCCCCHHHHHHHHHCCCCCCCCCH
EWAKNVRVGYLDQHTVLEKGKTIRDVLKDAFHYLFAMEEEMNEIYNKMGEADPDELEQLL
HHHCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
EDVGVIQDALTNNDFYVIDSKVEEIARGLGLQDVGLDRDVTDLSGGQRTKVLLAKLLLEK
HHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCC
PEILLLDEPTNYLDEQHIEWLKRYLQEYENAFILISHDIPFLNSVINLIYHVENQELTRY
CCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHH
VGDYHQFMEVYEVKKQQLEAAYKKQQQEVAELKDFVARNKARVSTRNMAMSRQKKLDKMD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHH
MIELAAEKPKPEFHFKPARTSGKLIFETKDLVIGYDTPLSRPLNLRMERGQKVALYGANG
HHHHHHCCCCCCEEECCCCCCCEEEEEECCEEEECCCCCCCCCCHHCCCCCEEEEEECCC
IGKTTLLKSLLGEIQPLEGTVERGEHQYTGYFEQEVKETNNNTCIEEVWSEFPSFTQYEI
CCHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
RAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDVDAKEELK
HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHH
RALKEYKGSILLISHEPEFYMDIATETWNCESWTTKVL
HHHHHHCCCEEEEECCCCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]