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The map label for this gene is ycnE [H]

Identifier: 154684881

GI number: 154684881

Start: 410481

End: 410768

Strand: Reverse

Name: ycnE [H]

Synonym: RBAM_004120

Alternate gene names: 154684881

Gene position: 410768-410481 (Counterclockwise)

Preceding gene: 154684883

Following gene: 154684880

Centisome position: 10.48

GC content: 44.44

Gene sequence:

>288_bases
ATGATCGTCTTACAGGCTTACATGAAAGTAAAAGCGGATAAACGCGAGGAATTTTTAGGAGAAGCGCAATCACTTGTTCA
GCATTCACGCGCGGAAGAAGGAAATGTGCAATACGATCTTTTCGAAAAAGTCGGTGAGGAAAATACATTCGTCATGCTTG
AACAATGGAAAGATGAAGAAGCGATGAAATCCCACAACGCAACTGACCATTTCCAAGGATTCGTGGCAAAAGCAAAAGAA
GTGCTGAGTGCGCCGCTTGACGTCGTCCGCACAGAACTGTCAGAGTAA

Upstream 100 bases:

>100_bases
GCGGTGAGGGTTTTTTCTTTACCTTTCGCAATGAAACATGTTACAGTTAGTTCGATAATATTCGAACTATAACAAATTAA
CCCAATCAGGAGGAATAACC

Downstream 100 bases:

>100_bases
CGAAAGGATGAATGACATGAACGAAGTCCTTCAATTATTAACAGACCACCGTTCCATCCGCAGCTACACAGATGAACCTG
TATCGGATGAACAGCTGGAT

Product: YcnE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MIVLQAYMKVKADKREEFLGEAQSLVQHSRAEEGNVQYDLFEKVGEENTFVMLEQWKDEEAMKSHNATDHFQGFVAKAKE
VLSAPLDVVRTELSE

Sequences:

>Translated_95_residues
MIVLQAYMKVKADKREEFLGEAQSLVQHSRAEEGNVQYDLFEKVGEENTFVMLEQWKDEEAMKSHNATDHFQGFVAKAKE
VLSAPLDVVRTELSE
>Mature_95_residues
MIVLQAYMKVKADKREEFLGEAQSLVQHSRAEEGNVQYDLFEKVGEENTFVMLEQWKDEEAMKSHNATDHFQGFVAKAKE
VLSAPLDVVRTELSE

Specific function: Putative monooxygenase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG1359

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lsrG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007138
- InterPro:   IPR011008 [H]

Pfam domain/function: PF03992 ABM [H]

EC number: NA

Molecular weight: Translated: 10904; Mature: 10904

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLQAYMKVKADKREEFLGEAQSLVQHSRAEEGNVQYDLFEKVGEENTFVMLEQWKDEE
CCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEHHHCCCHH
AMKSHNATDHFQGFVAKAKEVLSAPLDVVRTELSE
HHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MIVLQAYMKVKADKREEFLGEAQSLVQHSRAEEGNVQYDLFEKVGEENTFVMLEQWKDEE
CCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEHHHCCCHH
AMKSHNATDHFQGFVAKAKEVLSAPLDVVRTELSE
HHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]