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The map label for this gene is ydfM [H]

Identifier: 154684755

GI number: 154684755

Start: 258469

End: 259362

Strand: Reverse

Name: ydfM [H]

Synonym: RBAM_002860

Alternate gene names: 154684755

Gene position: 259362-258469 (Counterclockwise)

Preceding gene: 154684760

Following gene: 154684749

Centisome position: 6.62

GC content: 43.4

Gene sequence:

>894_bases
ATGACAAGTGAAAGAGAACAAATAAGCAAAAAAGTTGCTTTGATTGCATTGATAGCCAATCTGATCTTAATGGCAGGAAA
GATCTTTTTTGGACTGATAGGCGATAGTGAAGCAGTTTTTGCCGACGGTATACATTCTGCAGCGGATGTCGTGGCTTCAA
TTGCTGTCCTGGCCGTCATCGGCATTTCTAATAAGCCGCCCGATCAAGACCATCCTTTTGGGCATGGCAAAGCTGAGGTC
ATCAGCGAAGCGATTGTAGGAATCATATTAGTGCTCGTTTCCGTGTATATTCTGATAGAAGCGATTTCGTCCTTTGTTGA
AGGTCCAAGCATCCCGCAATACAGCGCATTGTTTGCGGCTCTGATATCCTACGCGGCTAAGCAGATCTTATATCGTTATT
CGATCAAACAAGGGGAAAAATGGAACAGTAAAGCGATTATAGCGATTGCATACGATCATAAAGGCGATATCGTTGCCTCT
CTTGCCGCTTTTATCGGCGTCCTATTGGCGATTATCGGGAACACACGCGGATGGTCCTATCTGTTGTACGCCGATGCAAT
TGCCAGTGTCATCGTGGCGTACCTTATTTTTAAGATTTCAATGGAATTAATCAAGCCGTCTGTTGACGTTCTCATGGAAA
AAAGTGTTGATCCCGAACTGATAGAGGAATATAAAGCCGTTATTTTGCATTGCCCTCAAGTCAAACGGCTCGATAAAATC
CGAGCAAGAGAACACGGCCACTATAAATTGCTTGATGTCCGGTTATCTTTGGATCATGATTTGACGATTAAGCAGGGACA
CGATATTGCCCGCGAAATCCGAAATGAAATCCAAAGACACTTTTCAGATGTTGAAGAAGTGCTCATCCACGTGAATCCTT
ATTTTGAAGAATGA

Upstream 100 bases:

>100_bases
ACTGAATTGGTACGATAAGCAAAGTGATTACACAAGAAAGGATACGGAGAGCGAATCAAAAGCGCCCCTATTTTTTTGTG
CAGTTTTATAGGAGGAAAAA

Downstream 100 bases:

>100_bases
AAAAGCAGCTTGTAGAGAAAACGATGTTTTTTCTGCAAGCTTTTTTGTTTTGTGCTGTTTCTTTACATATTCATTTGATT
TCAGGTGCAGAAAAAGCACT

Product: YdfM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MTSEREQISKKVALIALIANLILMAGKIFFGLIGDSEAVFADGIHSAADVVASIAVLAVIGISNKPPDQDHPFGHGKAEV
ISEAIVGIILVLVSVYILIEAISSFVEGPSIPQYSALFAALISYAAKQILYRYSIKQGEKWNSKAIIAIAYDHKGDIVAS
LAAFIGVLLAIIGNTRGWSYLLYADAIASVIVAYLIFKISMELIKPSVDVLMEKSVDPELIEEYKAVILHCPQVKRLDKI
RAREHGHYKLLDVRLSLDHDLTIKQGHDIAREIRNEIQRHFSDVEEVLIHVNPYFEE

Sequences:

>Translated_297_residues
MTSEREQISKKVALIALIANLILMAGKIFFGLIGDSEAVFADGIHSAADVVASIAVLAVIGISNKPPDQDHPFGHGKAEV
ISEAIVGIILVLVSVYILIEAISSFVEGPSIPQYSALFAALISYAAKQILYRYSIKQGEKWNSKAIIAIAYDHKGDIVAS
LAAFIGVLLAIIGNTRGWSYLLYADAIASVIVAYLIFKISMELIKPSVDVLMEKSVDPELIEEYKAVILHCPQVKRLDKI
RAREHGHYKLLDVRLSLDHDLTIKQGHDIAREIRNEIQRHFSDVEEVLIHVNPYFEE
>Mature_296_residues
TSEREQISKKVALIALIANLILMAGKIFFGLIGDSEAVFADGIHSAADVVASIAVLAVIGISNKPPDQDHPFGHGKAEVI
SEAIVGIILVLVSVYILIEAISSFVEGPSIPQYSALFAALISYAAKQILYRYSIKQGEKWNSKAIIAIAYDHKGDIVASL
AAFIGVLLAIIGNTRGWSYLLYADAIASVIVAYLIFKISMELIKPSVDVLMEKSVDPELIEEYKAVILHCPQVKRLDKIR
AREHGHYKLLDVRLSLDHDLTIKQGHDIAREIRNEIQRHFSDVEEVLIHVNPYFEE

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=273, Percent_Identity=22.7106227106227, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI115533508, Length=289, Percent_Identity=21.7993079584775, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI115533506, Length=289, Percent_Identity=21.7993079584775, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17553664, Length=314, Percent_Identity=25.1592356687898, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI72000060, Length=303, Percent_Identity=19.8019801980198, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI72000062, Length=296, Percent_Identity=20.2702702702703, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323831, Length=249, Percent_Identity=28.5140562248996, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6325032, Length=243, Percent_Identity=23.4567901234568, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 32798; Mature: 32666

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSEREQISKKVALIALIANLILMAGKIFFGLIGDSEAVFADGIHSAADVVASIAVLAVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GISNKPPDQDHPFGHGKAEVISEAIVGIILVLVSVYILIEAISSFVEGPSIPQYSALFAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LISYAAKQILYRYSIKQGEKWNSKAIIAIAYDHKGDIVASLAAFIGVLLAIIGNTRGWSY
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCH
LLYADAIASVIVAYLIFKISMELIKPSVDVLMEKSVDPELIEEYKAVILHCPQVKRLDKI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH
RAREHGHYKLLDVRLSLDHDLTIKQGHDIAREIRNEIQRHFSDVEEVLIHVNPYFEE
HHHCCCCEEEEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSEREQISKKVALIALIANLILMAGKIFFGLIGDSEAVFADGIHSAADVVASIAVLAVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GISNKPPDQDHPFGHGKAEVISEAIVGIILVLVSVYILIEAISSFVEGPSIPQYSALFAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LISYAAKQILYRYSIKQGEKWNSKAIIAIAYDHKGDIVASLAAFIGVLLAIIGNTRGWSY
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCH
LLYADAIASVIVAYLIFKISMELIKPSVDVLMEKSVDPELIEEYKAVILHCPQVKRLDKI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH
RAREHGHYKLLDVRLSLDHDLTIKQGHDIAREIRNEIQRHFSDVEEVLIHVNPYFEE
HHHCCCCEEEEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]