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The map label for this gene is ybgJ [H]

Identifier: 154684749

GI number: 154684749

Start: 253752

End: 254735

Strand: Reverse

Name: ybgJ [H]

Synonym: RBAM_002800

Alternate gene names: 154684749

Gene position: 254735-253752 (Counterclockwise)

Preceding gene: 154684755

Following gene: 154684748

Centisome position: 6.5

GC content: 50.3

Gene sequence:

>984_bases
ATGAAAGATATGGTCAGAGAGCGCCTTGAAAAAGAGGAACTGGCTTCACTTTTACAAGATTGGGTCGAGCATTACCGACC
GTTTTCCGTCAATGGAAAAAGCGCAAATTATATACCCGCCCTCGGAGAAATCAACGACTCTCAGCTGGGCATTTGCATAT
TAGAGCCGGATGGCTCAATGATTCATGCCGGTGAATGGAATGTCCCGTTCACATTGCAGAGCATCTCAAAAGTCATCAGC
TTTATTGCCGCCTGCATGAACAGAGGCATTTCTTACGTGCTGGATCGTGTGGACGTGGAACCGACGGGTGATGCGTTTAA
TTCTATCATCCGGCTTGAAATCCATAAACCCGGGAAGCCCTTCAACCCGATGATCAATGCCGGCGCCATTACCGTCGCCT
CGCTGCTTCCGGGTGAAACGGCGCATGATAAATTAGAATATCTCTTTTCCGTTTTTGAAAAATTAATAGGAAAACGCCCA
CACATTCACGAGGAGGTCTTCCGTTCTGAATGGCAGACCGCGCATCGGAACCGAGCGCTCGCCTACTATTTAAAAGAAAC
GAACTTTCTCGAGGCGGATGTGGAAGAAACGCTTGAAGTGTATTTAAAGCAGTGCGCCATGGAGGGTACAACCGAGGACA
TCGCTTTAATCGGATTGATACTTGCGCATGACGGATACCATCCGATCCGACGGGAACAGGTCATTCCGAAAGATGTCGCG
AAACTCGCCAAAGCCCTGATGCTGACGTGCGGAATGTACAATGCGTCAGGCAAATATGCGGCTTTCGTCGGCGTCCCGGC
CAAAAGCGGGGTATCCGGCGGCATTATGGCATTGGTTCCCCCAAGCGCCAGAAGAGAACAGCCTTTTCATAACGGCTGCG
GCATCGGCATTTACGGTCCGGCCATTGATGAATACGGCAACAGCCTGACCGGCGGCATGCTGCTGAAACATATCGCACAG
GAGTGGGAGCTCAGTATTTTTTAA

Upstream 100 bases:

>100_bases
GTAGATGTCATTATACATTAACATGGAACACGCTATTTTTGAAAACGTTTTCCAAGACCGGTTTCCGCTTCGGACAGGCT
TGCAATAGAGGAGGAATGTT

Downstream 100 bases:

>100_bases
TCAAACGAACCAAGAGGTGATTGGATGCAGGAATTCCTTGAAAATGTAATCGGCTCGGCAAATGATTTTTTATGGTCAAA
ACTGTTAATCGTACTGCTTC

Product: glutaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKDMVRERLEKEELASLLQDWVEHYRPFSVNGKSANYIPALGEINDSQLGICILEPDGSMIHAGEWNVPFTLQSISKVIS
FIAACMNRGISYVLDRVDVEPTGDAFNSIIRLEIHKPGKPFNPMINAGAITVASLLPGETAHDKLEYLFSVFEKLIGKRP
HIHEEVFRSEWQTAHRNRALAYYLKETNFLEADVEETLEVYLKQCAMEGTTEDIALIGLILAHDGYHPIRREQVIPKDVA
KLAKALMLTCGMYNASGKYAAFVGVPAKSGVSGGIMALVPPSARREQPFHNGCGIGIYGPAIDEYGNSLTGGMLLKHIAQ
EWELSIF

Sequences:

>Translated_327_residues
MKDMVRERLEKEELASLLQDWVEHYRPFSVNGKSANYIPALGEINDSQLGICILEPDGSMIHAGEWNVPFTLQSISKVIS
FIAACMNRGISYVLDRVDVEPTGDAFNSIIRLEIHKPGKPFNPMINAGAITVASLLPGETAHDKLEYLFSVFEKLIGKRP
HIHEEVFRSEWQTAHRNRALAYYLKETNFLEADVEETLEVYLKQCAMEGTTEDIALIGLILAHDGYHPIRREQVIPKDVA
KLAKALMLTCGMYNASGKYAAFVGVPAKSGVSGGIMALVPPSARREQPFHNGCGIGIYGPAIDEYGNSLTGGMLLKHIAQ
EWELSIF
>Mature_327_residues
MKDMVRERLEKEELASLLQDWVEHYRPFSVNGKSANYIPALGEINDSQLGICILEPDGSMIHAGEWNVPFTLQSISKVIS
FIAACMNRGISYVLDRVDVEPTGDAFNSIIRLEIHKPGKPFNPMINAGAITVASLLPGETAHDKLEYLFSVFEKLIGKRP
HIHEEVFRSEWQTAHRNRALAYYLKETNFLEADVEETLEVYLKQCAMEGTTEDIALIGLILAHDGYHPIRREQVIPKDVA
KLAKALMLTCGMYNASGKYAAFVGVPAKSGVSGGIMALVPPSARREQPFHNGCGIGIYGPAIDEYGNSLTGGMLLKHIAQ
EWELSIF

Specific function: Unknown

COG id: COG2066

COG function: function code E; Glutaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutaminase family [H]

Homologues:

Organism=Homo sapiens, GI156104878, Length=284, Percent_Identity=35.9154929577465, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI20336214, Length=284, Percent_Identity=34.5070422535211, Blast_Score=159, Evalue=2e-39,
Organism=Escherichia coli, GI1786693, Length=316, Percent_Identity=35.126582278481, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1787804, Length=313, Percent_Identity=34.5047923322684, Blast_Score=180, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17532727, Length=298, Percent_Identity=32.2147651006711, Blast_Score=167, Evalue=9e-42,
Organism=Caenorhabditis elegans, GI17507019, Length=297, Percent_Identity=32.6599326599327, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI193204073, Length=322, Percent_Identity=31.9875776397516, Blast_Score=158, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI193204075, Length=324, Percent_Identity=31.4814814814815, Blast_Score=154, Evalue=5e-38,
Organism=Drosophila melanogaster, GI281363239, Length=316, Percent_Identity=34.4936708860759, Blast_Score=176, Evalue=2e-44,
Organism=Drosophila melanogaster, GI281363241, Length=316, Percent_Identity=34.4936708860759, Blast_Score=176, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24653164, Length=316, Percent_Identity=34.4936708860759, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24653156, Length=316, Percent_Identity=34.4936708860759, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24653158, Length=316, Percent_Identity=34.4936708860759, Blast_Score=175, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24653162, Length=316, Percent_Identity=34.4936708860759, Blast_Score=175, Evalue=3e-44,
Organism=Drosophila melanogaster, GI24653166, Length=316, Percent_Identity=34.4936708860759, Blast_Score=175, Evalue=4e-44,
Organism=Drosophila melanogaster, GI116008307, Length=316, Percent_Identity=34.4936708860759, Blast_Score=175, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR015868 [H]

Pfam domain/function: PF04960 Glutaminase [H]

EC number: =3.5.1.2 [H]

Molecular weight: Translated: 36275; Mature: 36275

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDMVRERLEKEELASLLQDWVEHYRPFSVNGKSANYIPALGEINDSQLGICILEPDGSM
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCE
IHAGEWNVPFTLQSISKVISFIAACMNRGISYVLDRVDVEPTGDAFNSIIRLEIHKPGKP
EECCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHCCEEEEEEECCCCC
FNPMINAGAITVASLLPGETAHDKLEYLFSVFEKLIGKRPHIHEEVFRSEWQTAHRNRAL
CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEE
AYYLKETNFLEADVEETLEVYLKQCAMEGTTEDIALIGLILAHDGYHPIRREQVIPKDVA
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHCCCCHHHHH
KLAKALMLTCGMYNASGKYAAFVGVPAKSGVSGGIMALVPPSARREQPFHNGCGIGIYGP
HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECC
AIDEYGNSLTGGMLLKHIAQEWELSIF
CHHHHCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKDMVRERLEKEELASLLQDWVEHYRPFSVNGKSANYIPALGEINDSQLGICILEPDGSM
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCE
IHAGEWNVPFTLQSISKVISFIAACMNRGISYVLDRVDVEPTGDAFNSIIRLEIHKPGKP
EECCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHCCEEEEEEECCCCC
FNPMINAGAITVASLLPGETAHDKLEYLFSVFEKLIGKRPHIHEEVFRSEWQTAHRNRAL
CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEE
AYYLKETNFLEADVEETLEVYLKQCAMEGTTEDIALIGLILAHDGYHPIRREQVIPKDVA
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHCCCCHHHHH
KLAKALMLTCGMYNASGKYAAFVGVPAKSGVSGGIMALVPPSARREQPFHNGCGIGIYGP
HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECC
AIDEYGNSLTGGMLLKHIAQEWELSIF
CHHHHCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]