Click here to switch to the map view.

The map label for this gene is ybbJ [H]

Identifier: 154684693

GI number: 154684693

Start: 196935

End: 197411

Strand: Reverse

Name: ybbJ [H]

Synonym: RBAM_002190

Alternate gene names: 154684693

Gene position: 197411-196935 (Counterclockwise)

Preceding gene: 154684694

Following gene: 154684692

Centisome position: 5.04

GC content: 47.59

Gene sequence:

>477_bases
ATGGATGTAGCCCTGTCCTTTTATAAACCGGAGCATGCAGACGGGCTGAACGGGTTTGTGCTGAGTGAAGAAGATAAAAA
GTTCACAGCTCTCCCGAAGGATGTACTGCCGCAGGCTCTTGTCATCCGGGATCGCTACCCGACAGTCATTTTAAAAGAAG
ACCGCCCCGTCGGTTTTTTTATTTTACATACCTCAAAAGAAACCATTGCCCCATATTCGAACAATGTGTCTGCCATTTTG
CTGAGTGCGCTGTCCTTACATGCGCCATATCAGGGAAAAGGTTATGCCAAACAAGCGATGCTGCAGCTCCCCGCTTTTGT
CGCAAATTACTTTCCTTGGTGTGATGAAATCGTGCTTGCTGTAAACCATCGCAATCATCGTGCAAAGAACCTGTACCGGT
CTTCCGGTTTTATTGATAAAGGTCGTCGCAGGATCGGCCCCATCGGCGAACAGCACATTCTGCATCATTTTTTGTGA

Upstream 100 bases:

>100_bases
AATCGGAGACGGCATCACTTCCGCTCTTTTAAAACGGGCAGGCTGCCGTGTTCTATCAGAAGATGAATTGGATCAATTAT
AAAAAAGGAGAGTAGATATC

Downstream 100 bases:

>100_bases
AAGCGCTTGATTATTCATCTCATCCCTGCCGATTTTTCTTGAAACATCTATTCAGAAGCCCATATACTTCAAGTATTAAC
GACTTGGGAGGGTACAATCA

Product: YbbJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MDVALSFYKPEHADGLNGFVLSEEDKKFTALPKDVLPQALVIRDRYPTVILKEDRPVGFFILHTSKETIAPYSNNVSAIL
LSALSLHAPYQGKGYAKQAMLQLPAFVANYFPWCDEIVLAVNHRNHRAKNLYRSSGFIDKGRRRIGPIGEQHILHHFL

Sequences:

>Translated_158_residues
MDVALSFYKPEHADGLNGFVLSEEDKKFTALPKDVLPQALVIRDRYPTVILKEDRPVGFFILHTSKETIAPYSNNVSAIL
LSALSLHAPYQGKGYAKQAMLQLPAFVANYFPWCDEIVLAVNHRNHRAKNLYRSSGFIDKGRRRIGPIGEQHILHHFL
>Mature_158_residues
MDVALSFYKPEHADGLNGFVLSEEDKKFTALPKDVLPQALVIRDRYPTVILKEDRPVGFFILHTSKETIAPYSNNVSAIL
LSALSLHAPYQGKGYAKQAMLQLPAFVANYFPWCDEIVLAVNHRNHRAKNLYRSSGFIDKGRRRIGPIGEQHILHHFL

Specific function: Unknown

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17913; Mature: 17913

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVALSFYKPEHADGLNGFVLSEEDKKFTALPKDVLPQALVIRDRYPTVILKEDRPVGFF
CCCEECCCCCCCCCCCCCEEECCCCCCEECCCHHHCCCEEEEECCCCEEEEECCCCEEEE
ILHTSKETIAPYSNNVSAILLSALSLHAPYQGKGYAKQAMLQLPAFVANYFPWCDEIVLA
EEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHEEE
VNHRNHRAKNLYRSSGFIDKGRRRIGPIGEQHILHHFL
ECCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure
MDVALSFYKPEHADGLNGFVLSEEDKKFTALPKDVLPQALVIRDRYPTVILKEDRPVGFF
CCCEECCCCCCCCCCCCCEEECCCCCCEECCCHHHCCCEEEEECCCCEEEEECCCCEEEE
ILHTSKETIAPYSNNVSAILLSALSLHAPYQGKGYAKQAMLQLPAFVANYFPWCDEIVLA
EEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHEEE
VNHRNHRAKNLYRSSGFIDKGRRRIGPIGEQHILHHFL
ECCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]