| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is murQ
Identifier: 154684692
GI number: 154684692
Start: 195906
End: 196835
Strand: Reverse
Name: murQ
Synonym: RBAM_002180
Alternate gene names: 154684692
Gene position: 196835-195906 (Counterclockwise)
Preceding gene: 154684693
Following gene: 154684691
Centisome position: 5.02
GC content: 51.4
Gene sequence:
>930_bases ATGACAGACCGGCTTAACATTCACAGATTGACCACAGAAACCAGAAATCCGCAGACCGCTTCAATCCATCAAGCAGACAC GATGGAAATTCTCCGCATCATTAACCAAGAGGATTTCAAAGTGGCTGAAGCCGTTCAGCAGGTGCTGCCCGATATTCAGA TTGCCGTTCAATTCGCCCATCAGTCCTTACGGCGAAACGGCAGGCTGATTTATGCGGGAGCGGGCACAAGCGGCAGACTC GGTGTACTGGATGCGGTTGAATGCCCGCCTACATACAGCGTAAGTCCCGACACTGTCATCGGTCTGATGGCCGGAGGAGC AGACGCCTTTTTGCAAGCGGCTGAAGGTATTGAAGACAGCGAGGAAACCGGCGCTCTCGATCTCAAAACGATCGGGCTTA CCGCAGAAGACACCGTGATCGCCATCGCGGCAAGCGGGCGCACGCCGTATGCGGCCGGTGCGCTGAAATACGCAAAAACA ATCGGCGCCAAAACTGTCGCGCTCACATGCAATAAACACTCATTGATCAGCACTTATGCCGATCACAGCATTGAAGTCGT CGTCGGCCCCGAAGTGATTACAGGGTCAACACGAATGAAAGCGGCGACGGCACATAAAATGATTCTGAACATGATTTCCA CGGCCGTGATGATCAAAAGCGGCAAAGTGTACGAAAATTTAATGGTGGACGTTCATGTGAGCAACGAAAAATTGAAAGAA CGCGCAATCGGCATTATCCAAAGCATCACGGGCGTTCCGTACGACAAGGCAAAAGAAACGCTTGAGGCCGCAGGCAGCCA TGTCAAAACGGCAATCGTCATGCTGAAGACGAATTCAGACGAAACACACGCGAAGGCACTGCTCAAAGAAGCGGAAGGCT TCATTGACAAAGCCATTGAACAGCACGTTTCAAAAGAAAAAGAACGCTGA
Upstream 100 bases:
>100_bases AAAGCGCTTGATTATTCATCTCATCCCTGCCGATTTTTCTTGAAACATCTATTCAGAAGCCCATATACTTCAAGTATTAA CGACTTGGGAGGGTACAATC
Downstream 100 bases:
>100_bases TCGTTCTTTGGTGAAAAATAATGTGCTTTTACGAGCCCGCGCCGTTTTCATGATCGGCGCAGGCGCTTTTAGGACGCGTT TCAGGCACAGCTCCCCGGGA
Product: N-acetylmuramic acid-6-phosphate etherase
Products: NA
Alternate protein names: MurNAc-6-P etherase; N-acetylmuramic acid 6-phosphate hydrolase; N-acetylmuramic acid 6-phosphate lyase
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTDRLNIHRLTTETRNPQTASIHQADTMEILRIINQEDFKVAEAVQQVLPDIQIAVQFAHQSLRRNGRLIYAGAGTSGRL GVLDAVECPPTYSVSPDTVIGLMAGGADAFLQAAEGIEDSEETGALDLKTIGLTAEDTVIAIAASGRTPYAAGALKYAKT IGAKTVALTCNKHSLISTYADHSIEVVVGPEVITGSTRMKAATAHKMILNMISTAVMIKSGKVYENLMVDVHVSNEKLKE RAIGIIQSITGVPYDKAKETLEAAGSHVKTAIVMLKTNSDETHAKALLKEAEGFIDKAIEQHVSKEKER
Sequences:
>Translated_309_residues MTDRLNIHRLTTETRNPQTASIHQADTMEILRIINQEDFKVAEAVQQVLPDIQIAVQFAHQSLRRNGRLIYAGAGTSGRL GVLDAVECPPTYSVSPDTVIGLMAGGADAFLQAAEGIEDSEETGALDLKTIGLTAEDTVIAIAASGRTPYAAGALKYAKT IGAKTVALTCNKHSLISTYADHSIEVVVGPEVITGSTRMKAATAHKMILNMISTAVMIKSGKVYENLMVDVHVSNEKLKE RAIGIIQSITGVPYDKAKETLEAAGSHVKTAIVMLKTNSDETHAKALLKEAEGFIDKAIEQHVSKEKER >Mature_308_residues TDRLNIHRLTTETRNPQTASIHQADTMEILRIINQEDFKVAEAVQQVLPDIQIAVQFAHQSLRRNGRLIYAGAGTSGRLG VLDAVECPPTYSVSPDTVIGLMAGGADAFLQAAEGIEDSEETGALDLKTIGLTAEDTVIAIAASGRTPYAAGALKYAKTI GAKTVALTCNKHSLISTYADHSIEVVVGPEVITGSTRMKAATAHKMILNMISTAVMIKSGKVYENLMVDVHVSNEKLKER AIGIIQSITGVPYDKAKETLEAAGSHVKTAIVMLKTNSDETHAKALLKEAEGFIDKAIEQHVSKEKER
Specific function: Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
COG id: COG2103
COG function: function code R; Predicted sugar phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain
Homologues:
Organism=Escherichia coli, GI1788768, Length=298, Percent_Identity=50.6711409395973, Blast_Score=300, Evalue=6e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURQ_BACA2 (A7Z0U6)
Other databases:
- EMBL: CP000560 - RefSeq: YP_001419853.1 - ProteinModelPortal: A7Z0U6 - SMR: A7Z0U6 - STRING: A7Z0U6 - EnsemblBacteria: EBBACT00000005977 - GeneID: 5462442 - GenomeReviews: CP000560_GR - KEGG: bay:RBAM_002180 - eggNOG: COG2103 - GeneTree: EBGT00050000002902 - HOGENOM: HBG703490 - OMA: HLLTEQI - ProtClustDB: PRK05441 - BioCyc: BAMY326423:RBAM_002180-MONOMER - HAMAP: MF_00068 - InterPro: IPR005486 - InterPro: IPR005488 - InterPro: IPR001347 - TIGRFAMs: TIGR00274
Pfam domain/function: PF01380 SIS
EC number: NA
Molecular weight: Translated: 33188; Mature: 33057
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS01272 GCKR; PS51464 SIS
Important sites: ACT_SITE 87-87 ACT_SITE 118-118
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRLNIHRLTTETRNPQTASIHQADTMEILRIINQEDFKVAEAVQQVLPDIQIAVQFAH CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH QSLRRNGRLIYAGAGTSGRLGVLDAVECPPTYSVSPDTVIGLMAGGADAFLQAAEGIEDS HHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCC EETGALDLKTIGLTAEDTVIAIAASGRTPYAAGALKYAKTIGAKTVALTCNKHSLISTYA CCCCCEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHC DHSIEVVVGPEVITGSTRMKAATAHKMILNMISTAVMIKSGKVYENLMVDVHVSNEKLKE CCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECHHHHHH RAIGIIQSITGVPYDKAKETLEAAGSHVKTAIVMLKTNSDETHAKALLKEAEGFIDKAIE HHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH QHVSKEKER HHHHHHCCC >Mature Secondary Structure TDRLNIHRLTTETRNPQTASIHQADTMEILRIINQEDFKVAEAVQQVLPDIQIAVQFAH CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH QSLRRNGRLIYAGAGTSGRLGVLDAVECPPTYSVSPDTVIGLMAGGADAFLQAAEGIEDS HHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCC EETGALDLKTIGLTAEDTVIAIAASGRTPYAAGALKYAKTIGAKTVALTCNKHSLISTYA CCCCCEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHC DHSIEVVVGPEVITGSTRMKAATAHKMILNMISTAVMIKSGKVYENLMVDVHVSNEKLKE CCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECHHHHHH RAIGIIQSITGVPYDKAKETLEAAGSHVKTAIVMLKTNSDETHAKALLKEAEGFIDKAIE HHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH QHVSKEKER HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA