Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 154248585

GI number: 154248585

Start: 5157770

End: 5158897

Strand: Direct

Name: mmgC [H]

Synonym: Xaut_4666

Alternate gene names: 154248585

Gene position: 5157770-5158897 (Clockwise)

Preceding gene: 154248584

Following gene: 154248587

Centisome position: 97.15

GC content: 69.41

Gene sequence:

>1128_bases
ATGATCCTCACCGAGACCCAGACCGAGATCCGTGACGCAGTGCGGGCCTTCGCCTCGGCGCGCCTCGCCCCCGGCGCCGC
CGCCCGCGACCGGGAGCACCGTTTTCCCCGCGACGAGCTGACCGAGATGGGGGCGCTGGGCTTCCTCGGCATGCTGGTGC
CGGAGGCCCTGGGCGGCGCGGCGACCGATCTTGTCTCCTACGCCCTTGCGCTGGAAGAGATCGCGGCGGCGGACGGGGCC
TGCTCCACCATCGTGGCGGTGCACTCCTCGGTGGGCTGCATGCCCATCGTGAAGTTCGGCACGGAAGACCAGAAGCAGCG
CTTCCTGCCGAAGCTTGCCTCCGGCGAATGGATCGGCGGCTTCGCCCTCACCGAGCCGCAGGCCGGCTCGGATGCCGCCA
ACCTGAAGACCCGCGCCCGGCGCGACGGCGACCAGTACATCCTCTCCGGCGCCAAGCAGTTCATCACCTCGGGCAAGAAC
GGCAATGTGGTCATCGTCTTCGCCGTGACGGATCCGGACGCCGGCAAGAAGGGCATCTCCGCCTTCATCGTGCCCACCGA
CACCCCCGGCTATGAGGTGGTGCGGGTGGAGGAGAAGCTGGGCCAGCATTCCTCCGACACCTGCCAGCTCGCCTTCAACG
ACATGCGCCTGCCCGCCGACCTGCGCCTCGGCGCCGAGGGCGAGGGGCTGAAGATCGCCCTGTCGAATCTCGAGGGCGGG
CGTATCGGCATCGCCTCCCAATGCGTGGGCATGGCGCGGGCGGCGTTCGAGGCAGCGAAGAGCTATGCCAGCGAGCGCGT
CACCTTCGGCAAGCCCATCATGGAGCACCAGGCGGTGGCCTTCCGCCTCGCCGACATGGCGACGCGCATCGCGGCGGCGC
GGCACATGGTGCTGCATGCGGCGGCGCTGCGCGAGGCCGGCCAGCCCTGCCTCACCGAGGCCTCCATGGCCAAGCTGTTC
GCTTCCGAGATGGCCGAGCAGGTGTGCTCCGCCGCCATCCAGATCCACGGCGGCTATGGCTATCTCGCCGACTTCCCGGA
GGAGCGCATCTATCGCGACGTGCGGGTGTGCCAGATCTACGAGGGCACCAGCGACGTGCAGCGCATCGTCATCGCCCGGG
GGCTGTAA

Upstream 100 bases:

>100_bases
AGCGACGCGAACCGTGTCTTCGACCCCACGCCTGCCCCTCTCGCGCAGGTGGGGCGAGAGAACACCACCACCAAAACAAA
AACCCGGAGGAAACACGCCC

Downstream 100 bases:

>100_bases
GCGGCTTCGCCGGGGCTGTGACCGGCCGCGCCTCAGCTCAGCTCAGCGCGGCACGGCTGCCTTGTCGTCGGCGGCGGCAT
GCAGGCCCGACGCCTTCTGG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MILTETQTEIRDAVRAFASARLAPGAAARDREHRFPRDELTEMGALGFLGMLVPEALGGAATDLVSYALALEEIAAADGA
CSTIVAVHSSVGCMPIVKFGTEDQKQRFLPKLASGEWIGGFALTEPQAGSDAANLKTRARRDGDQYILSGAKQFITSGKN
GNVVIVFAVTDPDAGKKGISAFIVPTDTPGYEVVRVEEKLGQHSSDTCQLAFNDMRLPADLRLGAEGEGLKIALSNLEGG
RIGIASQCVGMARAAFEAAKSYASERVTFGKPIMEHQAVAFRLADMATRIAAARHMVLHAAALREAGQPCLTEASMAKLF
ASEMAEQVCSAAIQIHGGYGYLADFPEERIYRDVRVCQIYEGTSDVQRIVIARGL

Sequences:

>Translated_375_residues
MILTETQTEIRDAVRAFASARLAPGAAARDREHRFPRDELTEMGALGFLGMLVPEALGGAATDLVSYALALEEIAAADGA
CSTIVAVHSSVGCMPIVKFGTEDQKQRFLPKLASGEWIGGFALTEPQAGSDAANLKTRARRDGDQYILSGAKQFITSGKN
GNVVIVFAVTDPDAGKKGISAFIVPTDTPGYEVVRVEEKLGQHSSDTCQLAFNDMRLPADLRLGAEGEGLKIALSNLEGG
RIGIASQCVGMARAAFEAAKSYASERVTFGKPIMEHQAVAFRLADMATRIAAARHMVLHAAALREAGQPCLTEASMAKLF
ASEMAEQVCSAAIQIHGGYGYLADFPEERIYRDVRVCQIYEGTSDVQRIVIARGL
>Mature_375_residues
MILTETQTEIRDAVRAFASARLAPGAAARDREHRFPRDELTEMGALGFLGMLVPEALGGAATDLVSYALALEEIAAADGA
CSTIVAVHSSVGCMPIVKFGTEDQKQRFLPKLASGEWIGGFALTEPQAGSDAANLKTRARRDGDQYILSGAKQFITSGKN
GNVVIVFAVTDPDAGKKGISAFIVPTDTPGYEVVRVEEKLGQHSSDTCQLAFNDMRLPADLRLGAEGEGLKIALSNLEGG
RIGIASQCVGMARAAFEAAKSYASERVTFGKPIMEHQAVAFRLADMATRIAAARHMVLHAAALREAGQPCLTEASMAKLF
ASEMAEQVCSAAIQIHGGYGYLADFPEERIYRDVRVCQIYEGTSDVQRIVIARGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=370, Percent_Identity=46.4864864864865, Blast_Score=332, Evalue=3e-91,
Organism=Homo sapiens, GI4501859, Length=371, Percent_Identity=38.2749326145553, Blast_Score=279, Evalue=4e-75,
Organism=Homo sapiens, GI7656849, Length=376, Percent_Identity=38.8297872340425, Blast_Score=263, Evalue=2e-70,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=37.3333333333333, Blast_Score=255, Evalue=4e-68,
Organism=Homo sapiens, GI4557231, Length=374, Percent_Identity=36.8983957219251, Blast_Score=255, Evalue=5e-68,
Organism=Homo sapiens, GI187960098, Length=374, Percent_Identity=36.8983957219251, Blast_Score=255, Evalue=5e-68,
Organism=Homo sapiens, GI21361497, Length=351, Percent_Identity=40.1709401709402, Blast_Score=243, Evalue=2e-64,
Organism=Homo sapiens, GI226958414, Length=334, Percent_Identity=38.0239520958084, Blast_Score=236, Evalue=2e-62,
Organism=Homo sapiens, GI4501857, Length=375, Percent_Identity=35.4666666666667, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI76496475, Length=335, Percent_Identity=36.1194029850746, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI4557235, Length=335, Percent_Identity=36.1194029850746, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI4503943, Length=376, Percent_Identity=29.2553191489362, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI7669494, Length=362, Percent_Identity=29.2817679558011, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI48976061, Length=333, Percent_Identity=30.3303303303303, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI211971008, Length=333, Percent_Identity=30.3303303303303, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI38505218, Length=349, Percent_Identity=29.512893982808, Blast_Score=130, Evalue=2e-30,
Organism=Escherichia coli, GI87081958, Length=377, Percent_Identity=31.5649867374005, Blast_Score=164, Evalue=6e-42,
Organism=Escherichia coli, GI1786223, Length=347, Percent_Identity=29.3948126801153, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI87082384, Length=269, Percent_Identity=29.368029739777, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI87081702, Length=382, Percent_Identity=26.4397905759162, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17570075, Length=377, Percent_Identity=39.5225464190981, Blast_Score=269, Evalue=2e-72,
Organism=Caenorhabditis elegans, GI17506239, Length=372, Percent_Identity=36.8279569892473, Blast_Score=262, Evalue=2e-70,
Organism=Caenorhabditis elegans, GI17508101, Length=371, Percent_Identity=36.9272237196765, Blast_Score=260, Evalue=7e-70,
Organism=Caenorhabditis elegans, GI17538396, Length=375, Percent_Identity=34.9333333333333, Blast_Score=256, Evalue=1e-68,
Organism=Caenorhabditis elegans, GI17569725, Length=378, Percent_Identity=37.5661375661376, Blast_Score=251, Evalue=4e-67,
Organism=Caenorhabditis elegans, GI17534899, Length=378, Percent_Identity=37.5661375661376, Blast_Score=248, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI71990804, Length=276, Percent_Identity=40.5797101449275, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI71985184, Length=351, Percent_Identity=35.6125356125356, Blast_Score=217, Evalue=7e-57,
Organism=Caenorhabditis elegans, GI17533517, Length=369, Percent_Identity=33.0623306233062, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17534353, Length=376, Percent_Identity=30.8510638297872, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=37.6623376623377, Blast_Score=175, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17551932, Length=377, Percent_Identity=30.2387267904509, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17505929, Length=376, Percent_Identity=28.4574468085106, Blast_Score=164, Evalue=8e-41,
Organism=Caenorhabditis elegans, GI71985192, Length=298, Percent_Identity=33.2214765100671, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI71982178, Length=273, Percent_Identity=30.7692307692308, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17531909, Length=239, Percent_Identity=33.0543933054393, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17562446, Length=330, Percent_Identity=28.1818181818182, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI86563381, Length=324, Percent_Identity=29.320987654321, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI86563383, Length=324, Percent_Identity=29.320987654321, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17531913, Length=177, Percent_Identity=32.7683615819209, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21356377, Length=370, Percent_Identity=43.7837837837838, Blast_Score=313, Evalue=9e-86,
Organism=Drosophila melanogaster, GI24646207, Length=373, Percent_Identity=43.1635388739946, Blast_Score=305, Evalue=3e-83,
Organism=Drosophila melanogaster, GI24666513, Length=372, Percent_Identity=39.5161290322581, Blast_Score=285, Evalue=4e-77,
Organism=Drosophila melanogaster, GI24660351, Length=377, Percent_Identity=36.3395225464191, Blast_Score=250, Evalue=9e-67,
Organism=Drosophila melanogaster, GI21355753, Length=379, Percent_Identity=37.2031662269129, Blast_Score=242, Evalue=3e-64,
Organism=Drosophila melanogaster, GI281363737, Length=384, Percent_Identity=33.59375, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI19920834, Length=377, Percent_Identity=31.5649867374005, Blast_Score=178, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40013; Mature: 40013

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTETQTEIRDAVRAFASARLAPGAAARDREHRFPRDELTEMGALGFLGMLVPEALGGA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH
ATDLVSYALALEEIAAADGACSTIVAVHSSVGCMPIVKFGTEDQKQRFLPKLASGEWIGG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEECC
FALTEPQAGSDAANLKTRARRDGDQYILSGAKQFITSGKNGNVVIVFAVTDPDAGKKGIS
EEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCE
AFIVPTDTPGYEVVRVEEKLGQHSSDTCQLAFNDMRLPADLRLGAEGEGLKIALSNLEGG
EEEEECCCCCCEEEEEHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCEEEEEECCCCC
RIGIASQCVGMARAAFEAAKSYASERVTFGKPIMEHQAVAFRLADMATRIAAARHMVLHA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALREAGQPCLTEASMAKLFASEMAEQVCSAAIQIHGGYGYLADFPEERIYRDVRVCQIY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHEEEE
EGTSDVQRIVIARGL
CCHHHHHHHHHHCCC
>Mature Secondary Structure
MILTETQTEIRDAVRAFASARLAPGAAARDREHRFPRDELTEMGALGFLGMLVPEALGGA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH
ATDLVSYALALEEIAAADGACSTIVAVHSSVGCMPIVKFGTEDQKQRFLPKLASGEWIGG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEECC
FALTEPQAGSDAANLKTRARRDGDQYILSGAKQFITSGKNGNVVIVFAVTDPDAGKKGIS
EEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCE
AFIVPTDTPGYEVVRVEEKLGQHSSDTCQLAFNDMRLPADLRLGAEGEGLKIALSNLEGG
EEEEECCCCCCEEEEEHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCEEEEEECCCCC
RIGIASQCVGMARAAFEAAKSYASERVTFGKPIMEHQAVAFRLADMATRIAAARHMVLHA
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALREAGQPCLTEASMAKLFASEMAEQVCSAAIQIHGGYGYLADFPEERIYRDVRVCQIY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHEEEE
EGTSDVQRIVIARGL
CCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]