| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154248521
Identifier: 154248521
GI number: 154248521
Start: 5088783
End: 5090210
Strand: Direct
Name: 154248521
Synonym: Xaut_4601
Alternate gene names: NA
Gene position: 5088783-5090210 (Clockwise)
Preceding gene: 154248520
Following gene: 154248522
Centisome position: 95.85
GC content: 63.73
Gene sequence:
>1428_bases ATGGAGGCATCCTCGATTCGCCCAGCGTTGGCGGCTCTCCCGTTGGCGCTTCTGCTCGCGGGTTGCGCCACCTTTTCTCC CGACAGCGGCATGACCCTTGTGGCCGATGAAACCATACGCTCGGCGGCAGGAGAGCTCGGAGGAAATGTGGTCAAGATTT CCTCTGAAGAGGAAGCTGCGCTGGCGGGTGCCCGCGTCGCTGCGCTCTTGTCCCAGCCTCTTACCGCTCGCAATGCCGTC CAGGTCGCGCTCCTCAACAATCGAGGCCTTCAGGCCGAATATAACGCCCTTGGAATTTCCGAGGCTGCCTATGTGGAAGC AAGCCTCCCACCGAATCCCTCCTTCGGAGTGGAGCGGCTGAACGGCGGCGGGGAGCTCGACGTGGAGCGCCGTCTCGTTG CCAACCTGCTCGCCTTGCTGACGCTTCCCGCGCGCAGCGAGATTGCGAAAAGCCAGTTCGAAGCAGCGCAGCAACGAGCT ATCGAGGCCACCCTCCGCACGGCCGCCGAAACGCGACGCGCCTATTATCAGGTAGTGGCCTCCCGGCAGACGGTTGGCTT TCTGGAACAGGCGAGGCTCTCCGCTGACGCCGCGGCTGACCTCACCCGCAAGCTCGGCGAGACCGGCACCGCCACCAAGC TGGACCAGGCTCGCGCCAGCGCCTTCTACGCTGAGGTGTCGAACGAGCTTGCCCAAGCGCGTATGCAAGCCGGTACAGCA CGTGAGGCGCTCACTCGTAAACTCGGTGTGTGGGGCGCCTACGTCGGCTACAAGCTCCCCGGCCAGCTCCCTGCGTTGCC TAGCCGCATCCGTACCGCGCAGCAGGTGGAGGTGGACGCCGTGCGCCGGCGCACGGATCTCATCGCCGCGCGGCTCGAAC TCGACGCCATGGCGAAATCCCTCGGCCTCACGGAGGCGACACGCTTCGTCTCGCTGCTCGAAGGCGGATATCGGGGCAAC TACCAACGTGCGGATGGGGAGACCCTGCGTCCTCAAGGCTTCGAGCTCGAGGTCCAGATTCCAATTTTCGACTTCGGAGA GGTGAATGTGCGCCGTGCGAGGGAGACCTACATGCAGGCGGTGAACCTGCTCATGGAGAAGGCCGTGAACGTCCGCTCCG AGGCACGGGCCGCCTACGTGACCTACCGGGCGAGCTACGACATCGCCCGCCAGTATCAGACGAAAATTCTCCCCCTGCGC AAGACCATCAATGAGCAGGCGCTGCTAGAATACAATGGAATGCTCATCGATGTCTTCGAGCTTTTGACCACCGCCCGAGA AAGTATCACGAGCAACGTCGCTGCGATTGGAGCGAGGCGTGACTTCTTCCTCGCAGAGGTGGACTTCGAGACGGCTATCC TCGGCGGGGGATCCGGCAGTGGAATCGGAACCGTCGTCGCATCTGCGGCTCCCGGCGGCGGCGACTGA
Upstream 100 bases:
>100_bases ACGTGCCGGTGACTGCGGGTACAGCGGACCACGGGGTCGTGAGCCCGCGTTCGTGGATCGAGCAGAACCAGAGCGTCACT CCGAAAAGAGGAGGCGAATG
Downstream 100 bases:
>100_bases AAGCAGGAGATGAAGGCATGACGGTTTCCCGAAGGAACTTCCTCGGAGCCTCCGGCGCCCTCGCGCTGGTGAGCGCCGGC GCTGTCTCCGGCCGCGTCCA
Product: outer membrane efflux protein
Products: NA
Alternate protein names: Copper lerance Protein; Copper Resistance-Related Lipoprotein; Outer Membrane Efflux Protein Involved In Copper Resistance; Metal Ion Efflux Outer Membrane Protein; Outer Membrane Protein; Copper Resistance-Related Protein; TypeIsecretion System Outer Membrane Chanel Lipoprotein; Copper Resistance Protein; Outer Membrane Protein-Like Protein; Efflux Protein; Outer Membrane Efflux Protein Involved
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MEASSIRPALAALPLALLLAGCATFSPDSGMTLVADETIRSAAGELGGNVVKISSEEEAALAGARVAALLSQPLTARNAV QVALLNNRGLQAEYNALGISEAAYVEASLPPNPSFGVERLNGGGELDVERRLVANLLALLTLPARSEIAKSQFEAAQQRA IEATLRTAAETRRAYYQVVASRQTVGFLEQARLSADAAADLTRKLGETGTATKLDQARASAFYAEVSNELAQARMQAGTA REALTRKLGVWGAYVGYKLPGQLPALPSRIRTAQQVEVDAVRRRTDLIAARLELDAMAKSLGLTEATRFVSLLEGGYRGN YQRADGETLRPQGFELEVQIPIFDFGEVNVRRARETYMQAVNLLMEKAVNVRSEARAAYVTYRASYDIARQYQTKILPLR KTINEQALLEYNGMLIDVFELLTTARESITSNVAAIGARRDFFLAEVDFETAILGGGSGSGIGTVVASAAPGGGD
Sequences:
>Translated_475_residues MEASSIRPALAALPLALLLAGCATFSPDSGMTLVADETIRSAAGELGGNVVKISSEEEAALAGARVAALLSQPLTARNAV QVALLNNRGLQAEYNALGISEAAYVEASLPPNPSFGVERLNGGGELDVERRLVANLLALLTLPARSEIAKSQFEAAQQRA IEATLRTAAETRRAYYQVVASRQTVGFLEQARLSADAAADLTRKLGETGTATKLDQARASAFYAEVSNELAQARMQAGTA REALTRKLGVWGAYVGYKLPGQLPALPSRIRTAQQVEVDAVRRRTDLIAARLELDAMAKSLGLTEATRFVSLLEGGYRGN YQRADGETLRPQGFELEVQIPIFDFGEVNVRRARETYMQAVNLLMEKAVNVRSEARAAYVTYRASYDIARQYQTKILPLR KTINEQALLEYNGMLIDVFELLTTARESITSNVAAIGARRDFFLAEVDFETAILGGGSGSGIGTVVASAAPGGGD >Mature_475_residues MEASSIRPALAALPLALLLAGCATFSPDSGMTLVADETIRSAAGELGGNVVKISSEEEAALAGARVAALLSQPLTARNAV QVALLNNRGLQAEYNALGISEAAYVEASLPPNPSFGVERLNGGGELDVERRLVANLLALLTLPARSEIAKSQFEAAQQRA IEATLRTAAETRRAYYQVVASRQTVGFLEQARLSADAAADLTRKLGETGTATKLDQARASAFYAEVSNELAQARMQAGTA REALTRKLGVWGAYVGYKLPGQLPALPSRIRTAQQVEVDAVRRRTDLIAARLELDAMAKSLGLTEATRFVSLLEGGYRGN YQRADGETLRPQGFELEVQIPIFDFGEVNVRRARETYMQAVNLLMEKAVNVRSEARAAYVTYRASYDIARQYQTKILPLR KTINEQALLEYNGMLIDVFELLTTARESITSNVAAIGARRDFFLAEVDFETAILGGGSGSGIGTVVASAAPGGGD
Specific function: Unknown
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50847; Mature: 50847
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEASSIRPALAALPLALLLAGCATFSPDSGMTLVADETIRSAAGELGGNVVKISSEEEAA CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEECCCHHHH LAGARVAALLSQPLTARNAVQVALLNNRGLQAEYNALGISEAAYVEASLPPNPSFGVERL HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCC NGGGELDVERRLVANLLALLTLPARSEIAKSQFEAAQQRAIEATLRTAAETRRAYYQVVA CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRQTVGFLEQARLSADAAADLTRKLGETGTATKLDQARASAFYAEVSNELAQARMQAGTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH REALTRKLGVWGAYVGYKLPGQLPALPSRIRTAQQVEVDAVRRRTDLIAARLELDAMAKS HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLTEATRFVSLLEGGYRGNYQRADGETLRPQGFELEVQIPIFDFGEVNVRRARETYMQA HCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHH VNLLMEKAVNVRSEARAAYVTYRASYDIARQYQTKILPLRKTINEQALLEYNGMLIDVFE HHHHHHHHHCHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHH LLTTARESITSNVAAIGARRDFFLAEVDFETAILGGGSGSGIGTVVASAAPGGGD HHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCHHHHHEECCCCCCC >Mature Secondary Structure MEASSIRPALAALPLALLLAGCATFSPDSGMTLVADETIRSAAGELGGNVVKISSEEEAA CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEECCCHHHH LAGARVAALLSQPLTARNAVQVALLNNRGLQAEYNALGISEAAYVEASLPPNPSFGVERL HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHEEEECCCCCCCCCCCCC NGGGELDVERRLVANLLALLTLPARSEIAKSQFEAAQQRAIEATLRTAAETRRAYYQVVA CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRQTVGFLEQARLSADAAADLTRKLGETGTATKLDQARASAFYAEVSNELAQARMQAGTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH REALTRKLGVWGAYVGYKLPGQLPALPSRIRTAQQVEVDAVRRRTDLIAARLELDAMAKS HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLTEATRFVSLLEGGYRGNYQRADGETLRPQGFELEVQIPIFDFGEVNVRRARETYMQA HCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHH VNLLMEKAVNVRSEARAAYVTYRASYDIARQYQTKILPLRKTINEQALLEYNGMLIDVFE HHHHHHHHHCHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHH LLTTARESITSNVAAIGARRDFFLAEVDFETAILGGGSGSGIGTVVASAAPGGGD HHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA