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The map label for this gene is aapJ [H]

Identifier: 154248466

GI number: 154248466

Start: 5023792

End: 5024802

Strand: Direct

Name: aapJ [H]

Synonym: Xaut_4546

Alternate gene names: 154248466

Gene position: 5023792-5024802 (Clockwise)

Preceding gene: 154248462

Following gene: 154248467

Centisome position: 94.63

GC content: 64.69

Gene sequence:

>1011_bases
GTGAAACGCATCCTCTTCGCAGCAGTTGGGCTTTTGTCTCTGGCCGGTGCCGTCAATGCCGCCACGCTCGACGAGGTCAA
GGCGCGCGGCTCGGTCAACTGCGGCGTGTCGCAGGGCCTGCCGGGCTTCTCGAGCCCGAACGACAAGAATGAGTGGGGCG
GCCTGGACGTGGACTTCTGCCGCGCCATTGCGGCGGCGATCTTCAACGATCCCGCGAAAGTGAAGTTCAGCCCGCTGTCC
GCCAAGGACCGTTTCACGGCGCTGACCTCCGGCGCCATCGATGTGCTGTCGCGCAACACCACCTGGACCATGTCGCGCGA
CACCACGCTGGGATTCAACTTCGCCGGCGTGATCTATTATGACGGCCAGGGCTTCCTCGTGCGCAAGGCGCTGGGCCTGA
AGTCGGCCAAAGAGCTGCAGGGTGCCTCGATCTGCGTGCAGACCGGCACCTCCAACGAGCTCAACGTGTCCGACTTCTTC
CGCTCGAACAACATGAAGAACGGCGAGGTGATCGCGTTCGGCACCATCGACGAGACGGTGAAGGCCTATGAATCGGGCCG
CTGCGACGTGTTCACCGCCGACCGCTCCCAGCTCGCCGCCGTGCGCCTCAAGCTGACCAATGCCGCCGATCACGTGATCC
TGCCCGAGACCATCTCCAAGGAGCCCCTCGGCCCGCTGGTGCGCCATGGCGACGACCAGTGGTTCGACCTCGTGAAGTGG
GTCTATTTCGCCCTGCTCAACGCAGAGGAACTGGGCGTGACCCAGAAGAACGTGGACGAGCAGGTCAACTCCCAGAACCC
GGACGTGAAGCGCCTGCTCGGTACCGACGGCAAGTATGGCGAGGGCATCGGCCTCACCGCCGACTGGGCGGTGCGCATCA
TCAAGGCCACCGGCAATTACGGCGAGATCTACGACCGCAACGTCGGCCCCGCCACCCCGCTCGGCATCGAGCGCGGCCTC
AACAACCTGTGGAACAAGGGCGGCATCCAGTACGGCATGCCGGTGCGCTGA

Upstream 100 bases:

>100_bases
ATAGACGTCTTGGGTCGCCCCGTCGAGCCTGACCCGCCGCCCTGGCGGTTCGACCGGACGGCAGGGAGGCGGAGGCGTCA
TCTCAGAGAAGGAACCTTCC

Downstream 100 bases:

>100_bases
CCCAGCTCAGCCTGCACACTTAAGCTGACGGTGGCGGACGCCCGGGGCGGCGCCCGCCACCACCAAAGATAAAGGGCTCA
AAAGCCCACACTTTCGGGGG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKRILFAAVGLLSLAGAVNAATLDEVKARGSVNCGVSQGLPGFSSPNDKNEWGGLDVDFCRAIAAAIFNDPAKVKFSPLS
AKDRFTALTSGAIDVLSRNTTWTMSRDTTLGFNFAGVIYYDGQGFLVRKALGLKSAKELQGASICVQTGTSNELNVSDFF
RSNNMKNGEVIAFGTIDETVKAYESGRCDVFTADRSQLAAVRLKLTNAADHVILPETISKEPLGPLVRHGDDQWFDLVKW
VYFALLNAEELGVTQKNVDEQVNSQNPDVKRLLGTDGKYGEGIGLTADWAVRIIKATGNYGEIYDRNVGPATPLGIERGL
NNLWNKGGIQYGMPVR

Sequences:

>Translated_336_residues
MKRILFAAVGLLSLAGAVNAATLDEVKARGSVNCGVSQGLPGFSSPNDKNEWGGLDVDFCRAIAAAIFNDPAKVKFSPLS
AKDRFTALTSGAIDVLSRNTTWTMSRDTTLGFNFAGVIYYDGQGFLVRKALGLKSAKELQGASICVQTGTSNELNVSDFF
RSNNMKNGEVIAFGTIDETVKAYESGRCDVFTADRSQLAAVRLKLTNAADHVILPETISKEPLGPLVRHGDDQWFDLVKW
VYFALLNAEELGVTQKNVDEQVNSQNPDVKRLLGTDGKYGEGIGLTADWAVRIIKATGNYGEIYDRNVGPATPLGIERGL
NNLWNKGGIQYGMPVR
>Mature_336_residues
MKRILFAAVGLLSLAGAVNAATLDEVKARGSVNCGVSQGLPGFSSPNDKNEWGGLDVDFCRAIAAAIFNDPAKVKFSPLS
AKDRFTALTSGAIDVLSRNTTWTMSRDTTLGFNFAGVIYYDGQGFLVRKALGLKSAKELQGASICVQTGTSNELNVSDFF
RSNNMKNGEVIAFGTIDETVKAYESGRCDVFTADRSQLAAVRLKLTNAADHVILPETISKEPLGPLVRHGDDQWFDLVKW
VYFALLNAEELGVTQKNVDEQVNSQNPDVKRLLGTDGKYGEGIGLTADWAVRIIKATGNYGEIYDRNVGPATPLGIERGL
NNLWNKGGIQYGMPVR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36335; Mature: 36335

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILFAAVGLLSLAGAVNAATLDEVKARGSVNCGVSQGLPGFSSPNDKNEWGGLDVDFC
CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHH
RAIAAAIFNDPAKVKFSPLSAKDRFTALTSGAIDVLSRNTTWTMSRDTTLGFNFAGVIYY
HHHHHHHHCCCCCEEECCCCCCHHHHHHHHCHHHHHCCCCEEEEECCCEECEEEEEEEEE
DGQGFLVRKALGLKSAKELQGASICVQTGTSNELNVSDFFRSNNMKNGEVIAFGTIDETV
CCCCEEEEHHHCCCHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCEEEEECHHHHH
KAYESGRCDVFTADRSQLAAVRLKLTNAADHVILPETISKEPLGPLVRHGDDQWFDLVKW
HHHHCCCCEEEECCCHHEEEEEEEEECCCCCEECCCCCCCCCCCHHHHCCCHHHHHHHHH
VYFALLNAEELGVTQKNVDEQVNSQNPDVKRLLGTDGKYGEGIGLTADWAVRIIKATGNY
HHHHHHCHHHHCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHEEEEEEECCCC
GEIYDRNVGPATPLGIERGLNNLWNKGGIQYGMPVR
CCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKRILFAAVGLLSLAGAVNAATLDEVKARGSVNCGVSQGLPGFSSPNDKNEWGGLDVDFC
CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHH
RAIAAAIFNDPAKVKFSPLSAKDRFTALTSGAIDVLSRNTTWTMSRDTTLGFNFAGVIYY
HHHHHHHHCCCCCEEECCCCCCHHHHHHHHCHHHHHCCCCEEEEECCCEECEEEEEEEEE
DGQGFLVRKALGLKSAKELQGASICVQTGTSNELNVSDFFRSNNMKNGEVIAFGTIDETV
CCCCEEEEHHHCCCHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCEEEEECHHHHH
KAYESGRCDVFTADRSQLAAVRLKLTNAADHVILPETISKEPLGPLVRHGDDQWFDLVKW
HHHHCCCCEEEECCCHHEEEEEEEEECCCCCEECCCCCCCCCCCHHHHCCCHHHHHHHHH
VYFALLNAEELGVTQKNVDEQVNSQNPDVKRLLGTDGKYGEGIGLTADWAVRIIKATGNY
HHHHHHCHHHHCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHEEEEEEECCCC
GEIYDRNVGPATPLGIERGLNNLWNKGGIQYGMPVR
CCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]