| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248398
Identifier: 154248398
GI number: 154248398
Start: 4971128
End: 4972387
Strand: Reverse
Name: 154248398
Synonym: Xaut_4478
Alternate gene names: NA
Gene position: 4972387-4971128 (Counterclockwise)
Preceding gene: 154248400
Following gene: 154248397
Centisome position: 93.66
GC content: 63.41
Gene sequence:
>1260_bases ATGGGTATCCTGAGCGACGTCGTAAAGGCCAGCAAACACTACAACCTCAACTCGGCGGTGTTCCTGGGCGACAGCCGCTT GGCGGGGTTCCACTTCGATCCCGCCGGCAAGATGCGCAAGTCCGGGGCGAATTTCATCGCCATGGCGCTCCGGCTTGCGG GTCAGCGTATGCGCTGCGAAATCAATCTGGCGTTCTCGGGCTATCGGTCAGACCAGTATTTGTCGGCTGATCGAGTTTCC GCGGCGCTGGCGAGCAACAGCCACTGGCTCGTCCTCTACGGCGTCGCCAACGACATCGGCCAGCTCTCGGACACCGTTGA TCACTTCACGGTCAACATCAAGCCGGTGGCCGACGCATGGACCGCCACGGGCCGCGGCGTGATCCTCATCACCGAGACCG GTGCGAATAACTACGCCACCGCAGCCCAGCGCGGTGCCGTGTTCCGCTACAACCGGCAGGTTCGCGACTATTGCCTCGCG AACCGCAACGCTGTCCTGTTCGATGCAGCAGCCATCGTCATGGACCCATCACAGCCCATGACGGTTAACCCGGCTTATTC GGCCGACGGCCTGCACATCGGCCTCATGGCGGGGGCATACACCCTCGGCAGCAAGTTCGCTGACCTGATCAAGCAGATCG CCCCGCCGTGCGACGGTCTCGTCTACTCGGCCGGCCAGACCTGGGCGAACGGCGGCACTCAGATCTTTGACAATCCGCTG TTCCTCACCACCACGGGCGGCTCCGGCTATTCCAGCGGTGGGACCAGCGGCACACAGTTCATGACCGGGACCGTCCCGCT CGGTATCACCAAAGTCACGGCGCCGGCAGGATCATCCATTGTCGGCTCGGTGGTGGCGGGGGCCTACGGCAATGATCTCC AGCTCGCCATCACTGCCGGTGCGGCTGGGGACGTGGCCTTCATCATGGACTTTGCGAACGCGCGAGCCATTCTTGGCGAG CGGTATTACGCCAACTGCGAATGGGATTTGGTCGCGGGGCACAACAACTTCCAGTCCGCGGGGGCCTATTTGGAGGCCAA TCGTGATAACGGCACGACTGTTACCCAGGACGGCATCGTGGGGGCATCTGCCCTTAGCATGCCGGCGGGGGCGGGCACCT TCGTCTCGGAAACGGAGCGTCTCCTGATCTCCGCGGGTTCCGGCGGTTGGTTTGGGGCGCGATTTATCGCTTCGTTCGCC GGTGCCGGCAGCGCCACGATAAAGCTTCGGCGTTTCGGCGTCTGGCGCCAGATGGCCTAG
Upstream 100 bases:
>100_bases CGACGCCGAGGAGGCCGTGCTCGCCGCGATCGCCGCCGGCGATCTCACCACCTATGCGCAGGTAGAGGCGGCGTTTGCTG CCCAGATGGAGGGCTGATCG
Downstream 100 bases:
>100_bases GAGTGGCGCGCAAGACGCCGCCGCAGCACGGAGAAAGGGAAACAGATGCCGCACGACGAAACGGCCATGGAAGCCGAACT CCAGGCGAAGGGGCTCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MGILSDVVKASKHYNLNSAVFLGDSRLAGFHFDPAGKMRKSGANFIAMALRLAGQRMRCEINLAFSGYRSDQYLSADRVS AALASNSHWLVLYGVANDIGQLSDTVDHFTVNIKPVADAWTATGRGVILITETGANNYATAAQRGAVFRYNRQVRDYCLA NRNAVLFDAAAIVMDPSQPMTVNPAYSADGLHIGLMAGAYTLGSKFADLIKQIAPPCDGLVYSAGQTWANGGTQIFDNPL FLTTTGGSGYSSGGTSGTQFMTGTVPLGITKVTAPAGSSIVGSVVAGAYGNDLQLAITAGAAGDVAFIMDFANARAILGE RYYANCEWDLVAGHNNFQSAGAYLEANRDNGTTVTQDGIVGASALSMPAGAGTFVSETERLLISAGSGGWFGARFIASFA GAGSATIKLRRFGVWRQMA
Sequences:
>Translated_419_residues MGILSDVVKASKHYNLNSAVFLGDSRLAGFHFDPAGKMRKSGANFIAMALRLAGQRMRCEINLAFSGYRSDQYLSADRVS AALASNSHWLVLYGVANDIGQLSDTVDHFTVNIKPVADAWTATGRGVILITETGANNYATAAQRGAVFRYNRQVRDYCLA NRNAVLFDAAAIVMDPSQPMTVNPAYSADGLHIGLMAGAYTLGSKFADLIKQIAPPCDGLVYSAGQTWANGGTQIFDNPL FLTTTGGSGYSSGGTSGTQFMTGTVPLGITKVTAPAGSSIVGSVVAGAYGNDLQLAITAGAAGDVAFIMDFANARAILGE RYYANCEWDLVAGHNNFQSAGAYLEANRDNGTTVTQDGIVGASALSMPAGAGTFVSETERLLISAGSGGWFGARFIASFA GAGSATIKLRRFGVWRQMA >Mature_418_residues GILSDVVKASKHYNLNSAVFLGDSRLAGFHFDPAGKMRKSGANFIAMALRLAGQRMRCEINLAFSGYRSDQYLSADRVSA ALASNSHWLVLYGVANDIGQLSDTVDHFTVNIKPVADAWTATGRGVILITETGANNYATAAQRGAVFRYNRQVRDYCLAN RNAVLFDAAAIVMDPSQPMTVNPAYSADGLHIGLMAGAYTLGSKFADLIKQIAPPCDGLVYSAGQTWANGGTQIFDNPLF LTTTGGSGYSSGGTSGTQFMTGTVPLGITKVTAPAGSSIVGSVVAGAYGNDLQLAITAGAAGDVAFIMDFANARAILGER YYANCEWDLVAGHNNFQSAGAYLEANRDNGTTVTQDGIVGASALSMPAGAGTFVSETERLLISAGSGGWFGARFIASFAG AGSATIKLRRFGVWRQMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43881; Mature: 43750
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGILSDVVKASKHYNLNSAVFLGDSRLAGFHFDPAGKMRKSGANFIAMALRLAGQRMRCE CCHHHHHHHHHHCCCCCEEEEECCCCEECEEECCCHHHHHCCCHHHHHHHHHCCCEEEEE INLAFSGYRSDQYLSADRVSAALASNSHWLVLYGVANDIGQLSDTVDHFTVNIKPVADAW EEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHCCCEEEEEEEEECCCCC TATGRGVILITETGANNYATAAQRGAVFRYNRQVRDYCLANRNAVLFDAAAIVMDPSQPM CCCCCEEEEEEECCCCCCHHHHHCCCEEEECHHHHHHHHCCCCEEEEEEEEEEECCCCCE TVNPAYSADGLHIGLMAGAYTLGSKFADLIKQIAPPCDGLVYSAGQTWANGGTQIFDNPL EECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEECCCCCEEECCCE FLTTTGGSGYSSGGTSGTQFMTGTVPLGITKVTAPAGSSIVGSVVAGAYGNDLQLAITAG EEEECCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEEEC AAGDVAFIMDFANARAILGERYYANCEWDLVAGHNNFQSAGAYLEANRDNGTTVTQDGIV CCCCEEEEEEHHCHHHHHCCEEECCCEEEEEECCCCCCCCCCEEEECCCCCCEEECCCCC GASALSMPAGAGTFVSETERLLISAGSGGWFGARFIASFAGAGSATIKLRRFGVWRQMA CCHHHCCCCCCCCHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCHHCCC >Mature Secondary Structure GILSDVVKASKHYNLNSAVFLGDSRLAGFHFDPAGKMRKSGANFIAMALRLAGQRMRCE CHHHHHHHHHHCCCCCEEEEECCCCEECEEECCCHHHHHCCCHHHHHHHHHCCCEEEEE INLAFSGYRSDQYLSADRVSAALASNSHWLVLYGVANDIGQLSDTVDHFTVNIKPVADAW EEEEEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHCCCEEEEEEEEECCCCC TATGRGVILITETGANNYATAAQRGAVFRYNRQVRDYCLANRNAVLFDAAAIVMDPSQPM CCCCCEEEEEEECCCCCCHHHHHCCCEEEECHHHHHHHHCCCCEEEEEEEEEEECCCCCE TVNPAYSADGLHIGLMAGAYTLGSKFADLIKQIAPPCDGLVYSAGQTWANGGTQIFDNPL EECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEECCCCCEEECCCE FLTTTGGSGYSSGGTSGTQFMTGTVPLGITKVTAPAGSSIVGSVVAGAYGNDLQLAITAG EEEECCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEEEEEC AAGDVAFIMDFANARAILGERYYANCEWDLVAGHNNFQSAGAYLEANRDNGTTVTQDGIV CCCCEEEEEEHHCHHHHHCCEEECCCEEEEEECCCCCCCCCCEEEECCCCCCEEECCCCC GASALSMPAGAGTFVSETERLLISAGSGGWFGARFIASFAGAGSATIKLRRFGVWRQMA CCHHHCCCCCCCCHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA