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The map label for this gene is ugpA [H]

Identifier: 154248370

GI number: 154248370

Start: 4942770

End: 4943654

Strand: Direct

Name: ugpA [H]

Synonym: Xaut_4450

Alternate gene names: 154248370

Gene position: 4942770-4943654 (Clockwise)

Preceding gene: 154248369

Following gene: 154248371

Centisome position: 93.1

GC content: 67.34

Gene sequence:

>885_bases
ATGCAAGCCAAGCGCGTCACCTTCCCCGGCAAGATCACGCCCTATCTGCTGCTGCTGCCGCAGGTGGCGGTGACGCTCGT
GTTCTTCGTATGGCCGGCCGGGGAAGCATTGGTCTCGTCTTTGTTCGCGCAGGATGCGTTCGGGCTGGGAAGCACCTTCG
TGGGGCTCGCCAATTTCGCCGCCCTGCTGCGCGATCCCGCCTATCTGGAGGCGGTGGGCGTGTCCTTCCTGTTCGCCTTC
TGCGTCACCGTGCTGGCCATGGGCCTCGGTCTCCTGTTCGCGGCAGCGGCGGATGCGCTGGGCAAGGCCGCCGGGCTCTA
CCAGGTGCTGCTGGTGTGGCCCTATGCGGTTGCGCCGGCGGTGGCCGGGGTGCTGTGGCTGTTCATGTTCGACCCCTCGG
TGGGCATGATCGCCCGCGCCTTGCGCACCATGGGCCTCTCGTGGAACCACATGCTCGACGGCGGGCAGGCGCTGACCCTC
GTCATCCTCGCCGCGGCGTGGAAGCAGGTGAGCTACAATTTCCTGTTCTTCTACGCGGGACTGCGCGCCATCCCCCAGGG
CGCGCTGGAGGCGGCGGCGCTGGACGGCGCAGGGCCTTTCCAGCGCTTCCGCCACATCGTGCTGCCGCTGCTCGCGCCCA
CCACCTTCTTCCTGCTGGTGGTGAACCTCACCTACGCCTTCTTCGATACCTTCGGCATCATCCACGCCACCACCGGCGGC
GGGCCGGGGCGGGCCACCACCATCCTCGTCTACAAGGTGTTCCGCGACGGCTTCGAGGGGCTGGACCTCGGCGGCTCGTC
GGCCCAGTCGGTGGTGCTGCTGGTGATCGTGGTGGCGCTGACCGCGCTCCAGTTCCGTCATATCGAGCACAAGGTGAGCT
ATTGA

Upstream 100 bases:

>100_bases
ACTGAAGCGATAGCGCAAGGAGAGCCGGGACCCAGCGGCGGTGGGCTCCGGCAGCGCCCTCGCTGGATTCTGGAACCCAC
GATGACGGCGCGCTAACCCC

Downstream 100 bases:

>100_bases
TGGCCGGCACCTCGCGCCTGTCCCTGCTCTTCGCCCACCTCGTGCTCATCGCCGGCGCGGCGGTGATGATGCTGCCGCTC
TATGTGGCGTTCGTCGCCTC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MQAKRVTFPGKITPYLLLLPQVAVTLVFFVWPAGEALVSSLFAQDAFGLGSTFVGLANFAALLRDPAYLEAVGVSFLFAF
CVTVLAMGLGLLFAAAADALGKAAGLYQVLLVWPYAVAPAVAGVLWLFMFDPSVGMIARALRTMGLSWNHMLDGGQALTL
VILAAAWKQVSYNFLFFYAGLRAIPQGALEAAALDGAGPFQRFRHIVLPLLAPTTFFLLVVNLTYAFFDTFGIIHATTGG
GPGRATTILVYKVFRDGFEGLDLGGSSAQSVVLLVIVVALTALQFRHIEHKVSY

Sequences:

>Translated_294_residues
MQAKRVTFPGKITPYLLLLPQVAVTLVFFVWPAGEALVSSLFAQDAFGLGSTFVGLANFAALLRDPAYLEAVGVSFLFAF
CVTVLAMGLGLLFAAAADALGKAAGLYQVLLVWPYAVAPAVAGVLWLFMFDPSVGMIARALRTMGLSWNHMLDGGQALTL
VILAAAWKQVSYNFLFFYAGLRAIPQGALEAAALDGAGPFQRFRHIVLPLLAPTTFFLLVVNLTYAFFDTFGIIHATTGG
GPGRATTILVYKVFRDGFEGLDLGGSSAQSVVLLVIVVALTALQFRHIEHKVSY
>Mature_294_residues
MQAKRVTFPGKITPYLLLLPQVAVTLVFFVWPAGEALVSSLFAQDAFGLGSTFVGLANFAALLRDPAYLEAVGVSFLFAF
CVTVLAMGLGLLFAAAADALGKAAGLYQVLLVWPYAVAPAVAGVLWLFMFDPSVGMIARALRTMGLSWNHMLDGGQALTL
VILAAAWKQVSYNFLFFYAGLRAIPQGALEAAALDGAGPFQRFRHIVLPLLAPTTFFLLVVNLTYAFFDTFGIIHATTGG
GPGRATTILVYKVFRDGFEGLDLGGSSAQSVVLLVIVVALTALQFRHIEHKVSY

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=294, Percent_Identity=53.4013605442177, Blast_Score=309, Evalue=2e-85,
Organism=Escherichia coli, GI1790465, Length=260, Percent_Identity=30, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787570, Length=251, Percent_Identity=26.6932270916335, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31444; Mature: 31444

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA