| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248342
Identifier: 154248342
GI number: 154248342
Start: 4904922
End: 4905404
Strand: Direct
Name: 154248342
Synonym: Xaut_4422
Alternate gene names: NA
Gene position: 4904922-4905404 (Clockwise)
Preceding gene: 154248340
Following gene: 154248343
Centisome position: 92.39
GC content: 69.98
Gene sequence:
>483_bases ATGGCACTCATGCAACGCTTTCGACTTCCGCTCCTCGCGGCCGCCATCGTCTTCGCCTGCCTTTCGCCGGCCGCCGCGCA GAATCAGCCGGCCGACCAGAAGCCCGCTGCGGAACAGCTGACGCCGGAGCAGAAAGCCGCCGCCGAAGCCCAGCGCCGCT CGGTGGAGGAGTTCACCGAGGCGTCCAAGCTGCCGGGAACCGCCGGCCTGCCGGAATGTGTCTGGACAGGGCGGCGGATC GCCGCACTGCTGTGGCGCGACGACATCGACACCGCGCGCCGCCATCTGGAGATGTACCAGCAGTTTGGCTGCCCCACCGA GCACCTCAAGCTCGCCTTCCGCTGCCTGGTGCGGCAGGGCAACATCGATCCGAAGGCGCAGGAGCGGCTCGGCGGCCGGG TGCACCAGTGCTGGGTCAATCCGGATTACATCGCGGCCGCCCCGCAGCCTCCCGCCGCGGCGCCCGCCCCCGCGCAACAA TAA
Upstream 100 bases:
>100_bases CGTTGCGGCACCCCCCACTTCCGCAGCGCCGTCATGCTGACAAAATCGCGCCCTTCTCCTAACGTGTCGCTGCGGTTCTC TCCGCGTTCCTTCTGAGAAA
Downstream 100 bases:
>100_bases GACCACCGGGCGATCATGGCGCTGACGCAACGGCGTCCCAGCGGCGCCATGATCGGGATTTATCTCCAACGGTGAGCATG TTAGTGTCTCGTCGCAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MALMQRFRLPLLAAAIVFACLSPAAAQNQPADQKPAAEQLTPEQKAAAEAQRRSVEEFTEASKLPGTAGLPECVWTGRRI AALLWRDDIDTARRHLEMYQQFGCPTEHLKLAFRCLVRQGNIDPKAQERLGGRVHQCWVNPDYIAAAPQPPAAAPAPAQQ
Sequences:
>Translated_160_residues MALMQRFRLPLLAAAIVFACLSPAAAQNQPADQKPAAEQLTPEQKAAAEAQRRSVEEFTEASKLPGTAGLPECVWTGRRI AALLWRDDIDTARRHLEMYQQFGCPTEHLKLAFRCLVRQGNIDPKAQERLGGRVHQCWVNPDYIAAAPQPPAAAPAPAQQ >Mature_159_residues ALMQRFRLPLLAAAIVFACLSPAAAQNQPADQKPAAEQLTPEQKAAAEAQRRSVEEFTEASKLPGTAGLPECVWTGRRIA ALLWRDDIDTARRHLEMYQQFGCPTEHLKLAFRCLVRQGNIDPKAQERLGGRVHQCWVNPDYIAAAPQPPAAAPAPAQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17591; Mature: 17460
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALMQRFRLPLLAAAIVFACLSPAAAQNQPADQKPAAEQLTPEQKAAAEAQRRSVEEFTE CHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH ASKLPGTAGLPECVWTGRRIAALLWRDDIDTARRHLEMYQQFGCPTEHLKLAFRCLVRQG HHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC NIDPKAQERLGGRVHQCWVNPDYIAAAPQPPAAAPAPAQQ CCCHHHHHHHCCHHHEEECCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure ALMQRFRLPLLAAAIVFACLSPAAAQNQPADQKPAAEQLTPEQKAAAEAQRRSVEEFTE HHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH ASKLPGTAGLPECVWTGRRIAALLWRDDIDTARRHLEMYQQFGCPTEHLKLAFRCLVRQG HHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC NIDPKAQERLGGRVHQCWVNPDYIAAAPQPPAAAPAPAQQ CCCHHHHHHHCCHHHEEECCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA