Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is 154248333

Identifier: 154248333

GI number: 154248333

Start: 4893235

End: 4894506

Strand: Reverse

Name: 154248333

Synonym: Xaut_4413

Alternate gene names: NA

Gene position: 4894506-4893235 (Counterclockwise)

Preceding gene: 154248334

Following gene: 154248332

Centisome position: 92.19

GC content: 67.37

Gene sequence:

>1272_bases
GTGGCGGTGGTCGTTTGGCGCCAAATGTGGCGGGTTCTGGCATGCGCGATACTCTTCGGCGCCCTTTCGGGCTGCGGGGG
CCGGGTGTCCGGCGTGCTCATCCCAGTGCCGGACGACGTGCCGGGCACCTCCCGCGTCAATATGGTGGTGGCTACTGTCC
GCGAGCGCGCCGACGGGCCGGACATCTTCAGCGGCGAGCGCTCGCGCAAGTCGAGCTTCGCCGAGGTTACCGTCTCCATC
CCGCCGGACACCGCCCGCAAGCCGGGCGACGTGCAGTGGCCGAAGTCCGTCCCCGGTAATCCGGCGACCGACTTCGTCAC
CACCCAGCTCGATGAGTTGACCCAGGACCAGGCCATCAAGTGGTTCCACCAGCGCATCAGCCGTACGCCGAACCGGCAGG
CGCTGGTGTTCGTCCACGGCTTCAACCAGCGCTTTGACGACGCGGTGTTCCGCTTCGCCCAGATCGTCCACGATTCCAAC
GCCCCGGTGACGCCGGTCCTGTTCACCTGGCCGTCGCGCGGCAGCCTGCTCGCCTATGGCTATGACCGGGAGAGCACCTC
GGTCTCGCGCGATGCCCTGGAGCGGCTCCTCACCTTCATGGCGAAGGACCCGAACGTGGGGGAGATTTCCATCCTCGCCC
ACTCCATGGGCAACGTGGTGACGCTGGAAGCGCTGCGGCAGATGGCCATCCGCAACGGCCGCATCCTGCCCAAGATCAAA
TATGTGATGCTCGCCGCGCCCGACGTGGACGTGGACGTGTTCGCCTCCTTCTTCAATGAGATCGGCCCGAACCGGCCGGC
CTTCACCCTGTTCGTTTCGCAGGACGACAAGGCGCTGGCACTCTCGCGGCAGGTGTGGGGCGACGTGCCGCGCGTGGGCG
CGGTCAATCCGGAGCTGGAGCCCTACCGCTCCGAGTTCGAGCGCAACAACATCAACGTCATCGACCTTACCAAGCTGAAG
ACCGACGACGCGCTGGCCCATGGCAAGTTCGCCGCCAGCCCGCAGGTGGTGCAGGCCATTGGCGCCCGCCTCGCCGAGGG
CCAGACCATGACGGATTCCCGCGTGGGCGTGGGCGAGCACATCATCCAGATGACTTCGGGCGCGGCCACCACGGTGGGTA
CGGCCGCCGGCCTCGTCATTGCCGCGCCGGTCGCGGTGCTGGACGAGAACACCCGCGCCCATTACGGCCAGCACATGAAC
AAGCTCGGCGATTCCGTGACCGAAACCGCCACCAGCGGCGCCAATGTGGTGACGGCCCCGGCCGCCCACTGA

Upstream 100 bases:

>100_bases
GCCGGCGCCCCATTGGTCCCATCTTACGCTGCGCTGCGGTTGCCGCCGGAGGGTGGGTCCGCTATCGAACCTTTACGTTT
GGTTTCGGGGGATGAGCAGC

Downstream 100 bases:

>100_bases
TCCGGGCCTGATCCGGCGGCGCCTGCGCGTCCGCCGGTGTTGCTTCCGGGCAACGGACCAGGTGAAACGTTGACGGCGGC
GCGCCGGTTCAGGCTGACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MAVVVWRQMWRVLACAILFGALSGCGGRVSGVLIPVPDDVPGTSRVNMVVATVRERADGPDIFSGERSRKSSFAEVTVSI
PPDTARKPGDVQWPKSVPGNPATDFVTTQLDELTQDQAIKWFHQRISRTPNRQALVFVHGFNQRFDDAVFRFAQIVHDSN
APVTPVLFTWPSRGSLLAYGYDRESTSVSRDALERLLTFMAKDPNVGEISILAHSMGNVVTLEALRQMAIRNGRILPKIK
YVMLAAPDVDVDVFASFFNEIGPNRPAFTLFVSQDDKALALSRQVWGDVPRVGAVNPELEPYRSEFERNNINVIDLTKLK
TDDALAHGKFAASPQVVQAIGARLAEGQTMTDSRVGVGEHIIQMTSGAATTVGTAAGLVIAAPVAVLDENTRAHYGQHMN
KLGDSVTETATSGANVVTAPAAH

Sequences:

>Translated_423_residues
MAVVVWRQMWRVLACAILFGALSGCGGRVSGVLIPVPDDVPGTSRVNMVVATVRERADGPDIFSGERSRKSSFAEVTVSI
PPDTARKPGDVQWPKSVPGNPATDFVTTQLDELTQDQAIKWFHQRISRTPNRQALVFVHGFNQRFDDAVFRFAQIVHDSN
APVTPVLFTWPSRGSLLAYGYDRESTSVSRDALERLLTFMAKDPNVGEISILAHSMGNVVTLEALRQMAIRNGRILPKIK
YVMLAAPDVDVDVFASFFNEIGPNRPAFTLFVSQDDKALALSRQVWGDVPRVGAVNPELEPYRSEFERNNINVIDLTKLK
TDDALAHGKFAASPQVVQAIGARLAEGQTMTDSRVGVGEHIIQMTSGAATTVGTAAGLVIAAPVAVLDENTRAHYGQHMN
KLGDSVTETATSGANVVTAPAAH
>Mature_422_residues
AVVVWRQMWRVLACAILFGALSGCGGRVSGVLIPVPDDVPGTSRVNMVVATVRERADGPDIFSGERSRKSSFAEVTVSIP
PDTARKPGDVQWPKSVPGNPATDFVTTQLDELTQDQAIKWFHQRISRTPNRQALVFVHGFNQRFDDAVFRFAQIVHDSNA
PVTPVLFTWPSRGSLLAYGYDRESTSVSRDALERLLTFMAKDPNVGEISILAHSMGNVVTLEALRQMAIRNGRILPKIKY
VMLAAPDVDVDVFASFFNEIGPNRPAFTLFVSQDDKALALSRQVWGDVPRVGAVNPELEPYRSEFERNNINVIDLTKLKT
DDALAHGKFAASPQVVQAIGARLAEGQTMTDSRVGVGEHIIQMTSGAATTVGTAAGLVIAAPVAVLDENTRAHYGQHMNK
LGDSVTETATSGANVVTAPAAH

Specific function: Unknown

COG id: COG4782

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45841; Mature: 45709

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVVWRQMWRVLACAILFGALSGCGGRVSGVLIPVPDDVPGTSRVNMVVATVRERADGP
CEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCC
DIFSGERSRKSSFAEVTVSIPPDTARKPGDVQWPKSVPGNPATDFVTTQLDELTQDQAIK
CCCCCCHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
WFHQRISRTPNRQALVFVHGFNQRFDDAVFRFAQIVHDSNAPVTPVLFTWPSRGSLLAYG
HHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEE
YDRESTSVSRDALERLLTFMAKDPNVGEISILAHSMGNVVTLEALRQMAIRNGRILPKIK
CCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEHHHHHHHHHHHCCCCCCEEE
YVMLAAPDVDVDVFASFFNEIGPNRPAFTLFVSQDDKALALSRQVWGDVPRVGAVNPELE
EEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCC
PYRSEFERNNINVIDLTKLKTDDALAHGKFAASPQVVQAIGARLAEGQTMTDSRVGVGEH
HHHHHHHCCCCCEEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
IIQMTSGAATTVGTAAGLVIAAPVAVLDENTRAHYGQHMNKLGDSVTETATSGANVVTAP
HHHHCCCCCHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHCCHHHHHHCCCCCEEECC
AAH
CCC
>Mature Secondary Structure 
AVVVWRQMWRVLACAILFGALSGCGGRVSGVLIPVPDDVPGTSRVNMVVATVRERADGP
EEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCC
DIFSGERSRKSSFAEVTVSIPPDTARKPGDVQWPKSVPGNPATDFVTTQLDELTQDQAIK
CCCCCCHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
WFHQRISRTPNRQALVFVHGFNQRFDDAVFRFAQIVHDSNAPVTPVLFTWPSRGSLLAYG
HHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEE
YDRESTSVSRDALERLLTFMAKDPNVGEISILAHSMGNVVTLEALRQMAIRNGRILPKIK
CCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEHHHHHHHHHHHCCCCCCEEE
YVMLAAPDVDVDVFASFFNEIGPNRPAFTLFVSQDDKALALSRQVWGDVPRVGAVNPELE
EEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCC
PYRSEFERNNINVIDLTKLKTDDALAHGKFAASPQVVQAIGARLAEGQTMTDSRVGVGEH
HHHHHHHCCCCCEEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
IIQMTSGAATTVGTAAGLVIAAPVAVLDENTRAHYGQHMNKLGDSVTETATSGANVVTAP
HHHHCCCCCHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHCCHHHHHHCCCCCEEECC
AAH
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA