| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248333
Identifier: 154248333
GI number: 154248333
Start: 4893235
End: 4894506
Strand: Reverse
Name: 154248333
Synonym: Xaut_4413
Alternate gene names: NA
Gene position: 4894506-4893235 (Counterclockwise)
Preceding gene: 154248334
Following gene: 154248332
Centisome position: 92.19
GC content: 67.37
Gene sequence:
>1272_bases GTGGCGGTGGTCGTTTGGCGCCAAATGTGGCGGGTTCTGGCATGCGCGATACTCTTCGGCGCCCTTTCGGGCTGCGGGGG CCGGGTGTCCGGCGTGCTCATCCCAGTGCCGGACGACGTGCCGGGCACCTCCCGCGTCAATATGGTGGTGGCTACTGTCC GCGAGCGCGCCGACGGGCCGGACATCTTCAGCGGCGAGCGCTCGCGCAAGTCGAGCTTCGCCGAGGTTACCGTCTCCATC CCGCCGGACACCGCCCGCAAGCCGGGCGACGTGCAGTGGCCGAAGTCCGTCCCCGGTAATCCGGCGACCGACTTCGTCAC CACCCAGCTCGATGAGTTGACCCAGGACCAGGCCATCAAGTGGTTCCACCAGCGCATCAGCCGTACGCCGAACCGGCAGG CGCTGGTGTTCGTCCACGGCTTCAACCAGCGCTTTGACGACGCGGTGTTCCGCTTCGCCCAGATCGTCCACGATTCCAAC GCCCCGGTGACGCCGGTCCTGTTCACCTGGCCGTCGCGCGGCAGCCTGCTCGCCTATGGCTATGACCGGGAGAGCACCTC GGTCTCGCGCGATGCCCTGGAGCGGCTCCTCACCTTCATGGCGAAGGACCCGAACGTGGGGGAGATTTCCATCCTCGCCC ACTCCATGGGCAACGTGGTGACGCTGGAAGCGCTGCGGCAGATGGCCATCCGCAACGGCCGCATCCTGCCCAAGATCAAA TATGTGATGCTCGCCGCGCCCGACGTGGACGTGGACGTGTTCGCCTCCTTCTTCAATGAGATCGGCCCGAACCGGCCGGC CTTCACCCTGTTCGTTTCGCAGGACGACAAGGCGCTGGCACTCTCGCGGCAGGTGTGGGGCGACGTGCCGCGCGTGGGCG CGGTCAATCCGGAGCTGGAGCCCTACCGCTCCGAGTTCGAGCGCAACAACATCAACGTCATCGACCTTACCAAGCTGAAG ACCGACGACGCGCTGGCCCATGGCAAGTTCGCCGCCAGCCCGCAGGTGGTGCAGGCCATTGGCGCCCGCCTCGCCGAGGG CCAGACCATGACGGATTCCCGCGTGGGCGTGGGCGAGCACATCATCCAGATGACTTCGGGCGCGGCCACCACGGTGGGTA CGGCCGCCGGCCTCGTCATTGCCGCGCCGGTCGCGGTGCTGGACGAGAACACCCGCGCCCATTACGGCCAGCACATGAAC AAGCTCGGCGATTCCGTGACCGAAACCGCCACCAGCGGCGCCAATGTGGTGACGGCCCCGGCCGCCCACTGA
Upstream 100 bases:
>100_bases GCCGGCGCCCCATTGGTCCCATCTTACGCTGCGCTGCGGTTGCCGCCGGAGGGTGGGTCCGCTATCGAACCTTTACGTTT GGTTTCGGGGGATGAGCAGC
Downstream 100 bases:
>100_bases TCCGGGCCTGATCCGGCGGCGCCTGCGCGTCCGCCGGTGTTGCTTCCGGGCAACGGACCAGGTGAAACGTTGACGGCGGC GCGCCGGTTCAGGCTGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MAVVVWRQMWRVLACAILFGALSGCGGRVSGVLIPVPDDVPGTSRVNMVVATVRERADGPDIFSGERSRKSSFAEVTVSI PPDTARKPGDVQWPKSVPGNPATDFVTTQLDELTQDQAIKWFHQRISRTPNRQALVFVHGFNQRFDDAVFRFAQIVHDSN APVTPVLFTWPSRGSLLAYGYDRESTSVSRDALERLLTFMAKDPNVGEISILAHSMGNVVTLEALRQMAIRNGRILPKIK YVMLAAPDVDVDVFASFFNEIGPNRPAFTLFVSQDDKALALSRQVWGDVPRVGAVNPELEPYRSEFERNNINVIDLTKLK TDDALAHGKFAASPQVVQAIGARLAEGQTMTDSRVGVGEHIIQMTSGAATTVGTAAGLVIAAPVAVLDENTRAHYGQHMN KLGDSVTETATSGANVVTAPAAH
Sequences:
>Translated_423_residues MAVVVWRQMWRVLACAILFGALSGCGGRVSGVLIPVPDDVPGTSRVNMVVATVRERADGPDIFSGERSRKSSFAEVTVSI PPDTARKPGDVQWPKSVPGNPATDFVTTQLDELTQDQAIKWFHQRISRTPNRQALVFVHGFNQRFDDAVFRFAQIVHDSN APVTPVLFTWPSRGSLLAYGYDRESTSVSRDALERLLTFMAKDPNVGEISILAHSMGNVVTLEALRQMAIRNGRILPKIK YVMLAAPDVDVDVFASFFNEIGPNRPAFTLFVSQDDKALALSRQVWGDVPRVGAVNPELEPYRSEFERNNINVIDLTKLK TDDALAHGKFAASPQVVQAIGARLAEGQTMTDSRVGVGEHIIQMTSGAATTVGTAAGLVIAAPVAVLDENTRAHYGQHMN KLGDSVTETATSGANVVTAPAAH >Mature_422_residues AVVVWRQMWRVLACAILFGALSGCGGRVSGVLIPVPDDVPGTSRVNMVVATVRERADGPDIFSGERSRKSSFAEVTVSIP PDTARKPGDVQWPKSVPGNPATDFVTTQLDELTQDQAIKWFHQRISRTPNRQALVFVHGFNQRFDDAVFRFAQIVHDSNA PVTPVLFTWPSRGSLLAYGYDRESTSVSRDALERLLTFMAKDPNVGEISILAHSMGNVVTLEALRQMAIRNGRILPKIKY VMLAAPDVDVDVFASFFNEIGPNRPAFTLFVSQDDKALALSRQVWGDVPRVGAVNPELEPYRSEFERNNINVIDLTKLKT DDALAHGKFAASPQVVQAIGARLAEGQTMTDSRVGVGEHIIQMTSGAATTVGTAAGLVIAAPVAVLDENTRAHYGQHMNK LGDSVTETATSGANVVTAPAAH
Specific function: Unknown
COG id: COG4782
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45841; Mature: 45709
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVVWRQMWRVLACAILFGALSGCGGRVSGVLIPVPDDVPGTSRVNMVVATVRERADGP CEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCC DIFSGERSRKSSFAEVTVSIPPDTARKPGDVQWPKSVPGNPATDFVTTQLDELTQDQAIK CCCCCCHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH WFHQRISRTPNRQALVFVHGFNQRFDDAVFRFAQIVHDSNAPVTPVLFTWPSRGSLLAYG HHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEE YDRESTSVSRDALERLLTFMAKDPNVGEISILAHSMGNVVTLEALRQMAIRNGRILPKIK CCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEHHHHHHHHHHHCCCCCCEEE YVMLAAPDVDVDVFASFFNEIGPNRPAFTLFVSQDDKALALSRQVWGDVPRVGAVNPELE EEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCC PYRSEFERNNINVIDLTKLKTDDALAHGKFAASPQVVQAIGARLAEGQTMTDSRVGVGEH HHHHHHHCCCCCEEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH IIQMTSGAATTVGTAAGLVIAAPVAVLDENTRAHYGQHMNKLGDSVTETATSGANVVTAP HHHHCCCCCHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHCCHHHHHHCCCCCEEECC AAH CCC >Mature Secondary Structure AVVVWRQMWRVLACAILFGALSGCGGRVSGVLIPVPDDVPGTSRVNMVVATVRERADGP EEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCC DIFSGERSRKSSFAEVTVSIPPDTARKPGDVQWPKSVPGNPATDFVTTQLDELTQDQAIK CCCCCCHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH WFHQRISRTPNRQALVFVHGFNQRFDDAVFRFAQIVHDSNAPVTPVLFTWPSRGSLLAYG HHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEE YDRESTSVSRDALERLLTFMAKDPNVGEISILAHSMGNVVTLEALRQMAIRNGRILPKIK CCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEHHHHHHHHHHHCCCCCCEEE YVMLAAPDVDVDVFASFFNEIGPNRPAFTLFVSQDDKALALSRQVWGDVPRVGAVNPELE EEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCC PYRSEFERNNINVIDLTKLKTDDALAHGKFAASPQVVQAIGARLAEGQTMTDSRVGVGEH HHHHHHHCCCCCEEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHH IIQMTSGAATTVGTAAGLVIAAPVAVLDENTRAHYGQHMNKLGDSVTETATSGANVVTAP HHHHCCCCCHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHCCHHHHHHCCCCCEEECC AAH CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA