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The map label for this gene is virR [H]

Identifier: 154248310

GI number: 154248310

Start: 4867303

End: 4867833

Strand: Reverse

Name: virR [H]

Synonym: Xaut_4390

Alternate gene names: 154248310

Gene position: 4867833-4867303 (Counterclockwise)

Preceding gene: 154248312

Following gene: 154248308

Centisome position: 91.69

GC content: 69.68

Gene sequence:

>531_bases
GTGCGATCTTTACCGCAGGCTGGACCGTCCTATGCTCCGCCCAGCGAGGAAGAGGAAGAGACCATGGTCGAGATCGCGCC
CGCAGGCCCTATCGATGATGACATGCGGCCGGGTGAAAAGGCCGTGGCGCTGCCGGAGCGATTCGACGCCGGGCTCTATT
TCATCGGCCGCATCCGTACGCCTTGGACCGAGCGCGGCAGCTGCCCCCGCCGTGGCGACCCGGAGGAGGGCCCCGTCTGC
ACGCTGGAGATCGACCCGCGCTGGGCCGAGGCGCTGACCGGCATAGCTGATTGCCAGCGCCTGCAGGTGCTTTACTGGAT
GAACCGGGCGCGGCGCGACCTCGTACTCCAGAGCCCGCGCCATGACGGCGACACCCGCGGCACCTTCGCCCTGCGCTCGC
CGGTGCGGCCCAATCCCGTCGCTTCGTCGGTGGTGCGGCTGGTGGGCGTGGACGGCCTGCGGGTGCAGGTGCGCGGGCTC
GACTGCCTCGACGGCACGCCCCTCATCGACCTCAAGGTGCAGCACGACTGA

Upstream 100 bases:

>100_bases
GGTCCCACGGGCAACCGGTTCCGGGCGTGCGCAAGGCGGCCATGATCTCGATGAGGCGCGCGATGTCGCGGGAGGGGTCC
ATGAGGTTCTCCAGGCTCGA

Downstream 100 bases:

>100_bases
TCCGATAGCCGGACGAGACTGGCGGGGAATGAGAGAGGGTTCGGCCGTCGCTCTCACCCTCAATCTAAGAATCGCAGAAG
AGATATTATGGAACTCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MRSLPQAGPSYAPPSEEEEETMVEIAPAGPIDDDMRPGEKAVALPERFDAGLYFIGRIRTPWTERGSCPRRGDPEEGPVC
TLEIDPRWAEALTGIADCQRLQVLYWMNRARRDLVLQSPRHDGDTRGTFALRSPVRPNPVASSVVRLVGVDGLRVQVRGL
DCLDGTPLIDLKVQHD

Sequences:

>Translated_176_residues
MRSLPQAGPSYAPPSEEEEETMVEIAPAGPIDDDMRPGEKAVALPERFDAGLYFIGRIRTPWTERGSCPRRGDPEEGPVC
TLEIDPRWAEALTGIADCQRLQVLYWMNRARRDLVLQSPRHDGDTRGTFALRSPVRPNPVASSVVRLVGVDGLRVQVRGL
DCLDGTPLIDLKVQHD
>Mature_176_residues
MRSLPQAGPSYAPPSEEEEETMVEIAPAGPIDDDMRPGEKAVALPERFDAGLYFIGRIRTPWTERGSCPRRGDPEEGPVC
TLEIDPRWAEALTGIADCQRLQVLYWMNRARRDLVLQSPRHDGDTRGTFALRSPVRPNPVASSVVRLVGVDGLRVQVRGL
DCLDGTPLIDLKVQHD

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 19525; Mature: 19525

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLPQAGPSYAPPSEEEEETMVEIAPAGPIDDDMRPGEKAVALPERFDAGLYFIGRIRT
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECC
PWTERGSCPRRGDPEEGPVCTLEIDPRWAEALTGIADCQRLQVLYWMNRARRDLVLQSPR
CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
HDGDTRGTFALRSPVRPNPVASSVVRLVGVDGLRVQVRGLDCLDGTPLIDLKVQHD
CCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCEECCCCCEEEEEECCC
>Mature Secondary Structure
MRSLPQAGPSYAPPSEEEEETMVEIAPAGPIDDDMRPGEKAVALPERFDAGLYFIGRIRT
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECC
PWTERGSCPRRGDPEEGPVCTLEIDPRWAEALTGIADCQRLQVLYWMNRARRDLVLQSPR
CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
HDGDTRGTFALRSPVRPNPVASSVVRLVGVDGLRVQVRGLDCLDGTPLIDLKVQHD
CCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA