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The map label for this gene is ssb [H]

Identifier: 154248236

GI number: 154248236

Start: 4786826

End: 4787368

Strand: Direct

Name: ssb [H]

Synonym: Xaut_4316

Alternate gene names: 154248236

Gene position: 4786826-4787368 (Clockwise)

Preceding gene: 154248232

Following gene: 154248237

Centisome position: 90.17

GC content: 66.85

Gene sequence:

>543_bases
ATGGCCGGCAGCGTCAACAAGGTGATCCTGGTCGGCAACCTCGGCCGTGATCCGGAAATCAAATCTTTCCAGAACGGCGG
ACGGGTCTGCAACCTGTCGGTCGCCACCTCGGAAAACTGGCGCGACAAGGCGTCCGGCGAACGCCGCGAGCGCACCGAAT
GGCACCGCGTGGTGATCTTCAACGAGAATTTGGCGGGTGTGGCCGAGCGTTTTCTGAAGAAGGGCTCAAAGGTCTACATC
GAGGGCCAGCTTGAGACCCGCAAGTACGAGAAGGACGGGCGGGAAACCTACACCACCGAGATCGTGCTGCGGCCCTATCG
TGGCGAGCTCACCCTGCTCGACGGGCGCGGCGAAGGGGCTGGAGCGGGCGGCGACGACTATGCCGCCGGCTCGGACTTCG
GATCGGCAAGCCCCATGGGCGGGGGGTATGGCGGTGGCTCAGGGGGCAGCCGGCGCATGTCTGGCGCCCCGGCTGGATCC
TCGGGCGGCGTCGCCGGTGGCGGGCGCCCGGCGGCCGATCTCGACGACGAAATCCCGTTCTGA

Upstream 100 bases:

>100_bases
CGGTTCATCATGGGGAAAAGTCGGCTTTGGGCTGGCCTGCCGCGCCGCGGGCGGTAGGGTGCGGGCTGATGACAAACGAC
CACGAACGAGGAGCAACGGG

Downstream 100 bases:

>100_bases
AGCCTCCTGGCGCTCAGCGGTACTGAGCGGGGACGGACAACATGATGGGCAACGGTCGAAGCTCATTCTTCCGGCGTCTT
CTGACCGGCCGAACGCACAA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MAGSVNKVILVGNLGRDPEIKSFQNGGRVCNLSVATSENWRDKASGERRERTEWHRVVIFNENLAGVAERFLKKGSKVYI
EGQLETRKYEKDGRETYTTEIVLRPYRGELTLLDGRGEGAGAGGDDYAAGSDFGSASPMGGGYGGGSGGSRRMSGAPAGS
SGGVAGGGRPAADLDDEIPF

Sequences:

>Translated_180_residues
MAGSVNKVILVGNLGRDPEIKSFQNGGRVCNLSVATSENWRDKASGERRERTEWHRVVIFNENLAGVAERFLKKGSKVYI
EGQLETRKYEKDGRETYTTEIVLRPYRGELTLLDGRGEGAGAGGDDYAAGSDFGSASPMGGGYGGGSGGSRRMSGAPAGS
SGGVAGGGRPAADLDDEIPF
>Mature_179_residues
AGSVNKVILVGNLGRDPEIKSFQNGGRVCNLSVATSENWRDKASGERRERTEWHRVVIFNENLAGVAERFLKKGSKVYIE
GQLETRKYEKDGRETYTTEIVLRPYRGELTLLDGRGEGAGAGGDDYAAGSDFGSASPMGGGYGGGSGGSRRMSGAPAGSS
GGVAGGGRPAADLDDEIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=90, Percent_Identity=35.5555555555556, Blast_Score=66, Evalue=1e-11,
Organism=Escherichia coli, GI1790494, Length=183, Percent_Identity=47.5409836065574, Blast_Score=143, Evalue=6e-36,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18936; Mature: 18805

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSVNKVILVGNLGRDPEIKSFQNGGRVCNLSVATSENWRDKASGERRERTEWHRVVIF
CCCCCCEEEEEECCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCHHCCCCEEEEEEE
NENLAGVAERFLKKGSKVYIEGQLETRKYEKDGRETYTTEIVLRPYRGELTLLDGRGEGA
CCCHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCEEEEEEEEEECCCCCEEEEECCCCCC
GAGGDDYAAGSDFGSASPMGGGYGGGSGGSRRMSGAPAGSSGGVAGGGRPAADLDDEIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGSVNKVILVGNLGRDPEIKSFQNGGRVCNLSVATSENWRDKASGERRERTEWHRVVIF
CCCCCEEEEEECCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCHHCCCCEEEEEEE
NENLAGVAERFLKKGSKVYIEGQLETRKYEKDGRETYTTEIVLRPYRGELTLLDGRGEGA
CCCHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCEEEEEEEEEECCCCCEEEEECCCCCC
GAGGDDYAAGSDFGSASPMGGGYGGGSGGSRRMSGAPAGSSGGVAGGGRPAADLDDEIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA