Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154248174

Identifier: 154248174

GI number: 154248174

Start: 4720848

End: 4722017

Strand: Reverse

Name: 154248174

Synonym: Xaut_4254

Alternate gene names: NA

Gene position: 4722017-4720848 (Counterclockwise)

Preceding gene: 154248177

Following gene: 154248170

Centisome position: 88.94

GC content: 68.46

Gene sequence:

>1170_bases
TTGGACGGCACTAAAGGGTCAAGGCGACAGGCATCGGCATGGGCGCGCCTGCTGGCGCCGCTGATGATCCTGGCGCTCGC
CGGCTGCGCGCGTCCCGAGGGCCTGCTCGTTCCTGTTGCGATCGACACCCCGCCCGCGGGCAAGGTCGACATGCTGGTGG
CCACCACCCGCGCGCCGAGCGATGCGGAGGGCGTGCTCTTCACCGGCGAGCGGGGCGATGGCCTCGCCTTCACCAACATC
GTGGTGTCCATCCCGCCCAACCGCGAGGTCGGCTCGATCCAGTGGCCGAGCCGGGTGCCGGCGGACCCGGCGCGGGAATT
CGCGGTGACGCGGGTCGATCCCATCCCCAATAACAAGGTTGCGTCCTGGTACAGGCAGCAGCCGCGCGCCAAGCACCGGG
TGCTGATCTTCGTCCACGGCTTCAACACCCGCTTTGATGCGTCAGTGTTCCGCTTTGCCCAGTTCATCCACGATACCAGC
GCCGATTACATGCCGGTGCTGTTCACCTGGCCGTCCCGCGGCCGCATCACGGATTATCTCTACGACCGGGAAAGCGCCAA
TTTCTCGCGCTCGGACCTTGCCTATGTGCTCTCGTCCGCGGTCAAGAGCCCGCAGGTGGACGAGGTGGTGGTGCTGGCCC
ATTCCATGGGTGCCTGGCTCGCCATGGAATCCCTGCGCCAGCTCGCCCTGCGCGAAGGGCGGGTGCCGGCCAAGATCACC
AATGTGGTGCTGGCCTCCCCCGACCTCGACATCGACGTGTTCGAGCGGCAGGTGCAGGAGCTGGGGCCGAAGCGGCCGCA
CCTCACCCTCTTCGTCTCCCGCAACGACCAGGCGCTTGGGGTGTCGCGACTGCTTTCGGGACAGGTGACGCGCGTGGGCG
CGGTGGACCTGACCAACCCCGCCTATAGCGCCCGCCTCGAGCAGGCGACGGGCATCGTGGTGCTGGATCTCACCGCCTTG
CAGGGGGGCGACGCGCTCAACCACAGCAAGTTCGCCACCCAGCCCGACATGGTGCGCCTGCTCGGCGACCGGCTGATGGC
CGGCCAGAGCATCTCCGACGACGTCACGCCTGGTTCAACCGCCGTCCAGGCCGTGGGCGGGGCGGTGGGCACGGTGGTCG
CCGCCCCCTTCCAGCTGCCGATCCAGGTGTTCGCGGCCGGGCGCAATTGA

Upstream 100 bases:

>100_bases
AGGCGCCGCCATGGCCCATGCTTGCCTTGCGCTTCTCATCCCTTACAAGGGGTGATGGGCCTTGAAGAATGGCGGGGCTG
CATGATCGAGGGTGGTCGCA

Downstream 100 bases:

>100_bases
CGCCCGGCCGGTCACCACCACCCTACGGGATCGGCGCGACCACGTTGTCGTAGAACAGGTTCACGTCGGTATTCTCCTGC
TGCGAGGTCATGCGCAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MDGTKGSRRQASAWARLLAPLMILALAGCARPEGLLVPVAIDTPPAGKVDMLVATTRAPSDAEGVLFTGERGDGLAFTNI
VVSIPPNREVGSIQWPSRVPADPAREFAVTRVDPIPNNKVASWYRQQPRAKHRVLIFVHGFNTRFDASVFRFAQFIHDTS
ADYMPVLFTWPSRGRITDYLYDRESANFSRSDLAYVLSSAVKSPQVDEVVVLAHSMGAWLAMESLRQLALREGRVPAKIT
NVVLASPDLDIDVFERQVQELGPKRPHLTLFVSRNDQALGVSRLLSGQVTRVGAVDLTNPAYSARLEQATGIVVLDLTAL
QGGDALNHSKFATQPDMVRLLGDRLMAGQSISDDVTPGSTAVQAVGGAVGTVVAAPFQLPIQVFAAGRN

Sequences:

>Translated_389_residues
MDGTKGSRRQASAWARLLAPLMILALAGCARPEGLLVPVAIDTPPAGKVDMLVATTRAPSDAEGVLFTGERGDGLAFTNI
VVSIPPNREVGSIQWPSRVPADPAREFAVTRVDPIPNNKVASWYRQQPRAKHRVLIFVHGFNTRFDASVFRFAQFIHDTS
ADYMPVLFTWPSRGRITDYLYDRESANFSRSDLAYVLSSAVKSPQVDEVVVLAHSMGAWLAMESLRQLALREGRVPAKIT
NVVLASPDLDIDVFERQVQELGPKRPHLTLFVSRNDQALGVSRLLSGQVTRVGAVDLTNPAYSARLEQATGIVVLDLTAL
QGGDALNHSKFATQPDMVRLLGDRLMAGQSISDDVTPGSTAVQAVGGAVGTVVAAPFQLPIQVFAAGRN
>Mature_389_residues
MDGTKGSRRQASAWARLLAPLMILALAGCARPEGLLVPVAIDTPPAGKVDMLVATTRAPSDAEGVLFTGERGDGLAFTNI
VVSIPPNREVGSIQWPSRVPADPAREFAVTRVDPIPNNKVASWYRQQPRAKHRVLIFVHGFNTRFDASVFRFAQFIHDTS
ADYMPVLFTWPSRGRITDYLYDRESANFSRSDLAYVLSSAVKSPQVDEVVVLAHSMGAWLAMESLRQLALREGRVPAKIT
NVVLASPDLDIDVFERQVQELGPKRPHLTLFVSRNDQALGVSRLLSGQVTRVGAVDLTNPAYSARLEQATGIVVLDLTAL
QGGDALNHSKFATQPDMVRLLGDRLMAGQSISDDVTPGSTAVQAVGGAVGTVVAAPFQLPIQVFAAGRN

Specific function: Unknown

COG id: COG4782

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42029; Mature: 42029

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGTKGSRRQASAWARLLAPLMILALAGCARPEGLLVPVAIDTPPAGKVDMLVATTRAPS
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCC
DAEGVLFTGERGDGLAFTNIVVSIPPNREVGSIQWPSRVPADPAREFAVTRVDPIPNNKV
CCCCEEEECCCCCCEEEEEEEEECCCCCCCCCEECCCCCCCCHHHHEEEEECCCCCCCHH
ASWYRQQPRAKHRVLIFVHGFNTRFDASVFRFAQFIHDTSADYMPVLFTWPSRGRITDYL
HHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEHHE
YDRESANFSRSDLAYVLSSAVKSPQVDEVVVLAHSMGAWLAMESLRQLALREGRVPAKIT
ECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHEE
NVVLASPDLDIDVFERQVQELGPKRPHLTLFVSRNDQALGVSRLLSGQVTRVGAVDLTNP
EEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCC
AYSARLEQATGIVVLDLTALQGGDALNHSKFATQPDMVRLLGDRLMAGQSISDDVTPGST
HHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHH
AVQAVGGAVGTVVAAPFQLPIQVFAAGRN
HHHHHCCHHHHHHCCCCCCCEEEEEECCC
>Mature Secondary Structure
MDGTKGSRRQASAWARLLAPLMILALAGCARPEGLLVPVAIDTPPAGKVDMLVATTRAPS
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCC
DAEGVLFTGERGDGLAFTNIVVSIPPNREVGSIQWPSRVPADPAREFAVTRVDPIPNNKV
CCCCEEEECCCCCCEEEEEEEEECCCCCCCCCEECCCCCCCCHHHHEEEEECCCCCCCHH
ASWYRQQPRAKHRVLIFVHGFNTRFDASVFRFAQFIHDTSADYMPVLFTWPSRGRITDYL
HHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEHHE
YDRESANFSRSDLAYVLSSAVKSPQVDEVVVLAHSMGAWLAMESLRQLALREGRVPAKIT
ECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHEE
NVVLASPDLDIDVFERQVQELGPKRPHLTLFVSRNDQALGVSRLLSGQVTRVGAVDLTNP
EEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCC
AYSARLEQATGIVVLDLTALQGGDALNHSKFATQPDMVRLLGDRLMAGQSISDDVTPGST
HHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHH
AVQAVGGAVGTVVAAPFQLPIQVFAAGRN
HHHHHCCHHHHHHCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA