Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is yjbB [H]

Identifier: 154248143

GI number: 154248143

Start: 4676953

End: 4678641

Strand: Reverse

Name: yjbB [H]

Synonym: Xaut_4223

Alternate gene names: 154248143

Gene position: 4678641-4676953 (Counterclockwise)

Preceding gene: 154248150

Following gene: 154248130

Centisome position: 88.13

GC content: 70.75

Gene sequence:

>1689_bases
ATGGGTTCTTCCATGAGCTTTTCCGTCACGCTGCTGGATCTGGCCGGCTTCGCCGCGCTGCTCCTGTGGGGCATCCACAT
GGTGCAGACCGGGGTGATGCGGGCGCTGGGACCGCGGCTGAAGGTGGTGCTGGGCCGCGCCCTGCGCCATCCGCTGCAGG
GCTTCGTGGCGGGGGCGGCTGTGACCACGCTGCTCCAGAGCAGCACGGCGACGGCGCTCATGGTGTCCGGCTTCACAGCG
GCGGGACTCGTCGCGCTGGTGCCGGCGCTGGCGGTGATGCTCGGGGCCAATATCGGCACCACTCTCATCGTCCAGGTGCT
GTCCTTCGATGTCACGGCGGTGGCGCCGGTGGCGATTCTTGCCGGACTCATCATGTTCCGCCGCGGTGCCGGCACCGGCA
TGCGCGATCTTGGCCGGGTGATGATCGGCCTCGGCCTCGTGGTGCTGGCGCTCTCCCACCTCGTGGACCTGCTGCGGCCG
CTGGAGGATGCCCCCTCCATCCGCATGCTGCTCGGTGCCGTCGCCACGGTCCCGCTGCTGGACGTGCTGCTGGCGGCGGT
GCTGACCTGGGCGGTGCATTCCTCGGTGGCCGTGGTGCTCATCACCGCCTCGCTGGCGGCGCAGGGCGTGGTGCCGCCCA
ATGCCGCCATCGCCCTGGTGCTCGGCGCCAATCTCGGCAGCGCCATCGCGCCGGTGGTGGAGGCCATGGGGCGGGACGAT
GCGGCCGCCCGGCGCCTGCCCATGGGCAATCTCATCAACCGCATCCTCGGAGTGGCCGTGGCGCTGGCGCTCATCGAGCC
CATCGGCCGCTGGATGGTGGAATTCCAGCCGGACACGTCCCGCGTGGCGGTGGACTTCCACACCCTGTTCAACCTCGCCA
CGGCGCTGGTCTTCCTGCCCCTGCTGAAGCCGTTCGCCCGCGCGCTGGAATGGCTCTATCCGGACCGGGAGGATGCGGCC
GACCCCACCCGGCCGCGCTATCTCACCGCCGCCGACCGCGACATGCCGGTGCTGGCGCTGGGCGCCGCCGCGCGCGAGGC
ACTGCGCCTTGCCGACGCGCTGGAGGAGATGCTGGACGAGGCCGCCGGCGCGCTCCTTACCGGCGACCGTCGGCGCATCG
CGGAAACGCGCGGGCGCGACGACATTCCCGACCGGCTGAACCGCGAGATCCGCACCTATCTCGCCATGCTCGATCCTGAG
GACATGAGCCCCGCCGACCGACGGCGGGTGGAAGAGATCCTCGCCTTCTCCGCCAACATGGAGCAGGCGGCGGACGTGGT
GTGCGGCCGCCTGATGACCGATGCCGGCAAGCGGCTCAAGCGCGGCATCGCCTTCTCATCCGCGCAGCAGGCGGAGCTGG
ACCAGCTCATGGAGCGGCTGAAGGCCAATATCCGCCTCGCCTCCTCCCTGTTCATGACCGCCGACCCGCGCGCCGCGCGC
CTGCTGGCGCTGGAGAAGACCGCCTTCCGCGACAGCGAGACCCTGGCGGCGCGGCGGCATTTCGACCGCCTGCGGCAAGG
CCTTGCCACGCTCGCAGACGCCAGCGGGCTGCACATCGACATCGTGCGCGATTTGAAGCTGGTGAATTCGCACGTGGTGG
CTGCCGCCGCCTATCCGGTGCTGGCCCGCACCGGCGAACTGCTGGACACGCGCATCGCGGCAGGGCCCGAGCCGGCCGAT
CTGTCGTGA

Upstream 100 bases:

>100_bases
CAGCGCAATATCAATGGTGCCTACTCTGGTGCTTCGCCCGGCGTGCATCGGGGCAACGGACACGAAAATCGCAACGGAGG
TTGCCAGCGGAGGTCTCACC

Downstream 100 bases:

>100_bases
CGGCGGCAGAAGCGCCCTCAGCAGGTTCAACACTTTCAGACCGAAGCTATCGCTCCATCATGGCTGGGCTTCAACCGGCC
ACCCACGTCAATCCGACGGC

Product: Na/Pi-cotransporter II-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MGSSMSFSVTLLDLAGFAALLLWGIHMVQTGVMRALGPRLKVVLGRALRHPLQGFVAGAAVTTLLQSSTATALMVSGFTA
AGLVALVPALAVMLGANIGTTLIVQVLSFDVTAVAPVAILAGLIMFRRGAGTGMRDLGRVMIGLGLVVLALSHLVDLLRP
LEDAPSIRMLLGAVATVPLLDVLLAAVLTWAVHSSVAVVLITASLAAQGVVPPNAAIALVLGANLGSAIAPVVEAMGRDD
AAARRLPMGNLINRILGVAVALALIEPIGRWMVEFQPDTSRVAVDFHTLFNLATALVFLPLLKPFARALEWLYPDREDAA
DPTRPRYLTAADRDMPVLALGAAAREALRLADALEEMLDEAAGALLTGDRRRIAETRGRDDIPDRLNREIRTYLAMLDPE
DMSPADRRRVEEILAFSANMEQAADVVCGRLMTDAGKRLKRGIAFSSAQQAELDQLMERLKANIRLASSLFMTADPRAAR
LLALEKTAFRDSETLAARRHFDRLRQGLATLADASGLHIDIVRDLKLVNSHVVAAAAYPVLARTGELLDTRIAAGPEPAD
LS

Sequences:

>Translated_562_residues
MGSSMSFSVTLLDLAGFAALLLWGIHMVQTGVMRALGPRLKVVLGRALRHPLQGFVAGAAVTTLLQSSTATALMVSGFTA
AGLVALVPALAVMLGANIGTTLIVQVLSFDVTAVAPVAILAGLIMFRRGAGTGMRDLGRVMIGLGLVVLALSHLVDLLRP
LEDAPSIRMLLGAVATVPLLDVLLAAVLTWAVHSSVAVVLITASLAAQGVVPPNAAIALVLGANLGSAIAPVVEAMGRDD
AAARRLPMGNLINRILGVAVALALIEPIGRWMVEFQPDTSRVAVDFHTLFNLATALVFLPLLKPFARALEWLYPDREDAA
DPTRPRYLTAADRDMPVLALGAAAREALRLADALEEMLDEAAGALLTGDRRRIAETRGRDDIPDRLNREIRTYLAMLDPE
DMSPADRRRVEEILAFSANMEQAADVVCGRLMTDAGKRLKRGIAFSSAQQAELDQLMERLKANIRLASSLFMTADPRAAR
LLALEKTAFRDSETLAARRHFDRLRQGLATLADASGLHIDIVRDLKLVNSHVVAAAAYPVLARTGELLDTRIAAGPEPAD
LS
>Mature_561_residues
GSSMSFSVTLLDLAGFAALLLWGIHMVQTGVMRALGPRLKVVLGRALRHPLQGFVAGAAVTTLLQSSTATALMVSGFTAA
GLVALVPALAVMLGANIGTTLIVQVLSFDVTAVAPVAILAGLIMFRRGAGTGMRDLGRVMIGLGLVVLALSHLVDLLRPL
EDAPSIRMLLGAVATVPLLDVLLAAVLTWAVHSSVAVVLITASLAAQGVVPPNAAIALVLGANLGSAIAPVVEAMGRDDA
AARRLPMGNLINRILGVAVALALIEPIGRWMVEFQPDTSRVAVDFHTLFNLATALVFLPLLKPFARALEWLYPDREDAAD
PTRPRYLTAADRDMPVLALGAAAREALRLADALEEMLDEAAGALLTGDRRRIAETRGRDDIPDRLNREIRTYLAMLDPED
MSPADRRRVEEILAFSANMEQAADVVCGRLMTDAGKRLKRGIAFSSAQQAELDQLMERLKANIRLASSLFMTADPRAARL
LALEKTAFRDSETLAARRHFDRLRQGLATLADASGLHIDIVRDLKLVNSHVVAAAAYPVLARTGELLDTRIAAGPEPADL
S

Specific function: Unknown

COG id: COG1283

COG function: function code P; Na+/phosphate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqeW [H]

Homologues:

Organism=Escherichia coli, GI1790451, Length=540, Percent_Identity=37.2222222222222, Blast_Score=299, Evalue=3e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003841
- InterPro:   IPR004633 [H]

Pfam domain/function: PF02690 Na_Pi_cotrans [H]

EC number: NA

Molecular weight: Translated: 59796; Mature: 59665

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSSMSFSVTLLDLAGFAALLLWGIHMVQTGVMRALGPRLKVVLGRALRHPLQGFVAGAA
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
VTTLLQSSTATALMVSGFTAAGLVALVPALAVMLGANIGTTLIVQVLSFDVTAVAPVAIL
HHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHH
AGLIMFRRGAGTGMRDLGRVMIGLGLVVLALSHLVDLLRPLEDAPSIRMLLGAVATVPLL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DVLLAAVLTWAVHSSVAVVLITASLAAQGVVPPNAAIALVLGANLGSAIAPVVEAMGRDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCC
AAARRLPMGNLINRILGVAVALALIEPIGRWMVEFQPDTSRVAVDFHTLFNLATALVFLP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHHHH
LLKPFARALEWLYPDREDAADPTRPRYLTAADRDMPVLALGAAAREALRLADALEEMLDE
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
AAGALLTGDRRRIAETRGRDDIPDRLNREIRTYLAMLDPEDMSPADRRRVEEILAFSANM
HCCCHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCH
EQAADVVCGRLMTDAGKRLKRGIAFSSAQQAELDQLMERLKANIRLASSLFMTADPRAAR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LLALEKTAFRDSETLAARRHFDRLRQGLATLADASGLHIDIVRDLKLVNSHVVAAAAYPV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH
LARTGELLDTRIAAGPEPADLS
HHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GSSMSFSVTLLDLAGFAALLLWGIHMVQTGVMRALGPRLKVVLGRALRHPLQGFVAGAA
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
VTTLLQSSTATALMVSGFTAAGLVALVPALAVMLGANIGTTLIVQVLSFDVTAVAPVAIL
HHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHH
AGLIMFRRGAGTGMRDLGRVMIGLGLVVLALSHLVDLLRPLEDAPSIRMLLGAVATVPLL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
DVLLAAVLTWAVHSSVAVVLITASLAAQGVVPPNAAIALVLGANLGSAIAPVVEAMGRDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCC
AAARRLPMGNLINRILGVAVALALIEPIGRWMVEFQPDTSRVAVDFHTLFNLATALVFLP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHHHH
LLKPFARALEWLYPDREDAADPTRPRYLTAADRDMPVLALGAAAREALRLADALEEMLDE
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
AAGALLTGDRRRIAETRGRDDIPDRLNREIRTYLAMLDPEDMSPADRRRVEEILAFSANM
HCCCHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCH
EQAADVVCGRLMTDAGKRLKRGIAFSSAQQAELDQLMERLKANIRLASSLFMTADPRAAR
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LLALEKTAFRDSETLAARRHFDRLRQGLATLADASGLHIDIVRDLKLVNSHVVAAAAYPV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH
LARTGELLDTRIAAGPEPADLS
HHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]