| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yjbB [H]
Identifier: 154248143
GI number: 154248143
Start: 4676953
End: 4678641
Strand: Reverse
Name: yjbB [H]
Synonym: Xaut_4223
Alternate gene names: 154248143
Gene position: 4678641-4676953 (Counterclockwise)
Preceding gene: 154248150
Following gene: 154248130
Centisome position: 88.13
GC content: 70.75
Gene sequence:
>1689_bases ATGGGTTCTTCCATGAGCTTTTCCGTCACGCTGCTGGATCTGGCCGGCTTCGCCGCGCTGCTCCTGTGGGGCATCCACAT GGTGCAGACCGGGGTGATGCGGGCGCTGGGACCGCGGCTGAAGGTGGTGCTGGGCCGCGCCCTGCGCCATCCGCTGCAGG GCTTCGTGGCGGGGGCGGCTGTGACCACGCTGCTCCAGAGCAGCACGGCGACGGCGCTCATGGTGTCCGGCTTCACAGCG GCGGGACTCGTCGCGCTGGTGCCGGCGCTGGCGGTGATGCTCGGGGCCAATATCGGCACCACTCTCATCGTCCAGGTGCT GTCCTTCGATGTCACGGCGGTGGCGCCGGTGGCGATTCTTGCCGGACTCATCATGTTCCGCCGCGGTGCCGGCACCGGCA TGCGCGATCTTGGCCGGGTGATGATCGGCCTCGGCCTCGTGGTGCTGGCGCTCTCCCACCTCGTGGACCTGCTGCGGCCG CTGGAGGATGCCCCCTCCATCCGCATGCTGCTCGGTGCCGTCGCCACGGTCCCGCTGCTGGACGTGCTGCTGGCGGCGGT GCTGACCTGGGCGGTGCATTCCTCGGTGGCCGTGGTGCTCATCACCGCCTCGCTGGCGGCGCAGGGCGTGGTGCCGCCCA ATGCCGCCATCGCCCTGGTGCTCGGCGCCAATCTCGGCAGCGCCATCGCGCCGGTGGTGGAGGCCATGGGGCGGGACGAT GCGGCCGCCCGGCGCCTGCCCATGGGCAATCTCATCAACCGCATCCTCGGAGTGGCCGTGGCGCTGGCGCTCATCGAGCC CATCGGCCGCTGGATGGTGGAATTCCAGCCGGACACGTCCCGCGTGGCGGTGGACTTCCACACCCTGTTCAACCTCGCCA CGGCGCTGGTCTTCCTGCCCCTGCTGAAGCCGTTCGCCCGCGCGCTGGAATGGCTCTATCCGGACCGGGAGGATGCGGCC GACCCCACCCGGCCGCGCTATCTCACCGCCGCCGACCGCGACATGCCGGTGCTGGCGCTGGGCGCCGCCGCGCGCGAGGC ACTGCGCCTTGCCGACGCGCTGGAGGAGATGCTGGACGAGGCCGCCGGCGCGCTCCTTACCGGCGACCGTCGGCGCATCG CGGAAACGCGCGGGCGCGACGACATTCCCGACCGGCTGAACCGCGAGATCCGCACCTATCTCGCCATGCTCGATCCTGAG GACATGAGCCCCGCCGACCGACGGCGGGTGGAAGAGATCCTCGCCTTCTCCGCCAACATGGAGCAGGCGGCGGACGTGGT GTGCGGCCGCCTGATGACCGATGCCGGCAAGCGGCTCAAGCGCGGCATCGCCTTCTCATCCGCGCAGCAGGCGGAGCTGG ACCAGCTCATGGAGCGGCTGAAGGCCAATATCCGCCTCGCCTCCTCCCTGTTCATGACCGCCGACCCGCGCGCCGCGCGC CTGCTGGCGCTGGAGAAGACCGCCTTCCGCGACAGCGAGACCCTGGCGGCGCGGCGGCATTTCGACCGCCTGCGGCAAGG CCTTGCCACGCTCGCAGACGCCAGCGGGCTGCACATCGACATCGTGCGCGATTTGAAGCTGGTGAATTCGCACGTGGTGG CTGCCGCCGCCTATCCGGTGCTGGCCCGCACCGGCGAACTGCTGGACACGCGCATCGCGGCAGGGCCCGAGCCGGCCGAT CTGTCGTGA
Upstream 100 bases:
>100_bases CAGCGCAATATCAATGGTGCCTACTCTGGTGCTTCGCCCGGCGTGCATCGGGGCAACGGACACGAAAATCGCAACGGAGG TTGCCAGCGGAGGTCTCACC
Downstream 100 bases:
>100_bases CGGCGGCAGAAGCGCCCTCAGCAGGTTCAACACTTTCAGACCGAAGCTATCGCTCCATCATGGCTGGGCTTCAACCGGCC ACCCACGTCAATCCGACGGC
Product: Na/Pi-cotransporter II-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MGSSMSFSVTLLDLAGFAALLLWGIHMVQTGVMRALGPRLKVVLGRALRHPLQGFVAGAAVTTLLQSSTATALMVSGFTA AGLVALVPALAVMLGANIGTTLIVQVLSFDVTAVAPVAILAGLIMFRRGAGTGMRDLGRVMIGLGLVVLALSHLVDLLRP LEDAPSIRMLLGAVATVPLLDVLLAAVLTWAVHSSVAVVLITASLAAQGVVPPNAAIALVLGANLGSAIAPVVEAMGRDD AAARRLPMGNLINRILGVAVALALIEPIGRWMVEFQPDTSRVAVDFHTLFNLATALVFLPLLKPFARALEWLYPDREDAA DPTRPRYLTAADRDMPVLALGAAAREALRLADALEEMLDEAAGALLTGDRRRIAETRGRDDIPDRLNREIRTYLAMLDPE DMSPADRRRVEEILAFSANMEQAADVVCGRLMTDAGKRLKRGIAFSSAQQAELDQLMERLKANIRLASSLFMTADPRAAR LLALEKTAFRDSETLAARRHFDRLRQGLATLADASGLHIDIVRDLKLVNSHVVAAAAYPVLARTGELLDTRIAAGPEPAD LS
Sequences:
>Translated_562_residues MGSSMSFSVTLLDLAGFAALLLWGIHMVQTGVMRALGPRLKVVLGRALRHPLQGFVAGAAVTTLLQSSTATALMVSGFTA AGLVALVPALAVMLGANIGTTLIVQVLSFDVTAVAPVAILAGLIMFRRGAGTGMRDLGRVMIGLGLVVLALSHLVDLLRP LEDAPSIRMLLGAVATVPLLDVLLAAVLTWAVHSSVAVVLITASLAAQGVVPPNAAIALVLGANLGSAIAPVVEAMGRDD AAARRLPMGNLINRILGVAVALALIEPIGRWMVEFQPDTSRVAVDFHTLFNLATALVFLPLLKPFARALEWLYPDREDAA DPTRPRYLTAADRDMPVLALGAAAREALRLADALEEMLDEAAGALLTGDRRRIAETRGRDDIPDRLNREIRTYLAMLDPE DMSPADRRRVEEILAFSANMEQAADVVCGRLMTDAGKRLKRGIAFSSAQQAELDQLMERLKANIRLASSLFMTADPRAAR LLALEKTAFRDSETLAARRHFDRLRQGLATLADASGLHIDIVRDLKLVNSHVVAAAAYPVLARTGELLDTRIAAGPEPAD LS >Mature_561_residues GSSMSFSVTLLDLAGFAALLLWGIHMVQTGVMRALGPRLKVVLGRALRHPLQGFVAGAAVTTLLQSSTATALMVSGFTAA GLVALVPALAVMLGANIGTTLIVQVLSFDVTAVAPVAILAGLIMFRRGAGTGMRDLGRVMIGLGLVVLALSHLVDLLRPL EDAPSIRMLLGAVATVPLLDVLLAAVLTWAVHSSVAVVLITASLAAQGVVPPNAAIALVLGANLGSAIAPVVEAMGRDDA AARRLPMGNLINRILGVAVALALIEPIGRWMVEFQPDTSRVAVDFHTLFNLATALVFLPLLKPFARALEWLYPDREDAAD PTRPRYLTAADRDMPVLALGAAAREALRLADALEEMLDEAAGALLTGDRRRIAETRGRDDIPDRLNREIRTYLAMLDPED MSPADRRRVEEILAFSANMEQAADVVCGRLMTDAGKRLKRGIAFSSAQQAELDQLMERLKANIRLASSLFMTADPRAARL LALEKTAFRDSETLAARRHFDRLRQGLATLADASGLHIDIVRDLKLVNSHVVAAAAYPVLARTGELLDTRIAAGPEPADL S
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqeW [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=540, Percent_Identity=37.2222222222222, Blast_Score=299, Evalue=3e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 59796; Mature: 59665
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSSMSFSVTLLDLAGFAALLLWGIHMVQTGVMRALGPRLKVVLGRALRHPLQGFVAGAA CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH VTTLLQSSTATALMVSGFTAAGLVALVPALAVMLGANIGTTLIVQVLSFDVTAVAPVAIL HHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHH AGLIMFRRGAGTGMRDLGRVMIGLGLVVLALSHLVDLLRPLEDAPSIRMLLGAVATVPLL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DVLLAAVLTWAVHSSVAVVLITASLAAQGVVPPNAAIALVLGANLGSAIAPVVEAMGRDD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCC AAARRLPMGNLINRILGVAVALALIEPIGRWMVEFQPDTSRVAVDFHTLFNLATALVFLP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHHHH LLKPFARALEWLYPDREDAADPTRPRYLTAADRDMPVLALGAAAREALRLADALEEMLDE HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHH AAGALLTGDRRRIAETRGRDDIPDRLNREIRTYLAMLDPEDMSPADRRRVEEILAFSANM HCCCHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCH EQAADVVCGRLMTDAGKRLKRGIAFSSAQQAELDQLMERLKANIRLASSLFMTADPRAAR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LLALEKTAFRDSETLAARRHFDRLRQGLATLADASGLHIDIVRDLKLVNSHVVAAAAYPV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH LARTGELLDTRIAAGPEPADLS HHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GSSMSFSVTLLDLAGFAALLLWGIHMVQTGVMRALGPRLKVVLGRALRHPLQGFVAGAA CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH VTTLLQSSTATALMVSGFTAAGLVALVPALAVMLGANIGTTLIVQVLSFDVTAVAPVAIL HHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHH AGLIMFRRGAGTGMRDLGRVMIGLGLVVLALSHLVDLLRPLEDAPSIRMLLGAVATVPLL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DVLLAAVLTWAVHSSVAVVLITASLAAQGVVPPNAAIALVLGANLGSAIAPVVEAMGRDD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCC AAARRLPMGNLINRILGVAVALALIEPIGRWMVEFQPDTSRVAVDFHTLFNLATALVFLP HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEHHHHHHHHHHHHHHHHH LLKPFARALEWLYPDREDAADPTRPRYLTAADRDMPVLALGAAAREALRLADALEEMLDE HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHH AAGALLTGDRRRIAETRGRDDIPDRLNREIRTYLAMLDPEDMSPADRRRVEEILAFSANM HCCCHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCH EQAADVVCGRLMTDAGKRLKRGIAFSSAQQAELDQLMERLKANIRLASSLFMTADPRAAR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LLALEKTAFRDSETLAARRHFDRLRQGLATLADASGLHIDIVRDLKLVNSHVVAAAAYPV HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHH LARTGELLDTRIAAGPEPADLS HHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]