| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is iorA [H]
Identifier: 154248130
GI number: 154248130
Start: 4663001
End: 4663474
Strand: Reverse
Name: iorA [H]
Synonym: Xaut_4210
Alternate gene names: 154248130
Gene position: 4663474-4663001 (Counterclockwise)
Preceding gene: 154248143
Following gene: 154248129
Centisome position: 87.84
GC content: 69.62
Gene sequence:
>474_bases ATGTCCGAGCCGGTTCAACTTCAGGTGAATGGCACAGCGCACCGCTTCGCGCTGCCCCGCTCCACGCCCCTCATCTATGT GCTGCGCAACGACCTTGGCCTCAACGGCCCCAAGTTCGGCTGCGGGCTCGGGGAGTGCGGTGCCTGCACCGTGCTCATGG ACGGGGTCGCCGCCCGCTCCTGCGTCACCACATTGGGCACGGCGGAAGGTCGCGCCATCACCACGCTGGAGGGGCTCGGC ACCCCTGAGGCGCCCCACCCGGTGCAGGCCGCCTTCATCGCCGAGCAGGCGGCGCAATGTGGCTACTGCCTGAATGGCAT GATCATGACCACCGTCGCCTTCCTCGCCCGCACCCCCGCCCCCACGGAGGACGAGGCCCGCGCCGCCCTGCGCTACAATC TGTGTCGCTGCGGGACCCATGTGGAGATCCTGCGCGCGGTGATGCGCGCCGCCCACGGGGAGGCATCCGAATGA
Upstream 100 bases:
>100_bases CGCGCTTGACGCCAGATCATTCGTATAGAAACAATCCAGGGAAGCGGGAGGCGTGCCGCTTCGCCTACACTGGCACGTCC GATGACGGACCGAAACGAAG
Downstream 100 bases:
>100_bases GCGAGCCGCGCCCCGACAAGGATCAGATCCTCGCTGCCACCGGCAATCTTTGCGTGCTGCGCCCGGCACAGTCGGTGGCC GGCCTCCAGCGCAGCGCAAT
Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSEPVQLQVNGTAHRFALPRSTPLIYVLRNDLGLNGPKFGCGLGECGACTVLMDGVAARSCVTTLGTAEGRAITTLEGLG TPEAPHPVQAAFIAEQAAQCGYCLNGMIMTTVAFLARTPAPTEDEARAALRYNLCRCGTHVEILRAVMRAAHGEASE
Sequences:
>Translated_157_residues MSEPVQLQVNGTAHRFALPRSTPLIYVLRNDLGLNGPKFGCGLGECGACTVLMDGVAARSCVTTLGTAEGRAITTLEGLG TPEAPHPVQAAFIAEQAAQCGYCLNGMIMTTVAFLARTPAPTEDEARAALRYNLCRCGTHVEILRAVMRAAHGEASE >Mature_156_residues SEPVQLQVNGTAHRFALPRSTPLIYVLRNDLGLNGPKFGCGLGECGACTVLMDGVAARSCVTTLGTAEGRAITTLEGLGT PEAPHPVQAAFIAEQAAQCGYCLNGMIMTTVAFLARTPAPTEDEARAALRYNLCRCGTHVEILRAVMRAAHGEASE
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=150, Percent_Identity=37.3333333333333, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI71773480, Length=90, Percent_Identity=37.7777777777778, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1786480, Length=163, Percent_Identity=41.1042944785276, Blast_Score=123, Evalue=5e-30, Organism=Escherichia coli, GI1789232, Length=146, Percent_Identity=41.7808219178082, Blast_Score=95, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17539860, Length=134, Percent_Identity=38.8059701492537, Blast_Score=100, Evalue=3e-22, Organism=Caenorhabditis elegans, GI32566215, Length=134, Percent_Identity=37.3134328358209, Blast_Score=98, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17540638, Length=147, Percent_Identity=36.0544217687075, Blast_Score=95, Evalue=1e-20, Organism=Drosophila melanogaster, GI17737937, Length=132, Percent_Identity=35.6060606060606, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI24647193, Length=161, Percent_Identity=32.9192546583851, Blast_Score=77, Evalue=6e-15, Organism=Drosophila melanogaster, GI24647199, Length=136, Percent_Identity=33.0882352941176, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24647195, Length=162, Percent_Identity=31.4814814814815, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24647197, Length=162, Percent_Identity=31.4814814814815, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 16502; Mature: 16371
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPVQLQVNGTAHRFALPRSTPLIYVLRNDLGLNGPKFGCGLGECGACTVLMDGVAARS CCCCEEEEECCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH CVTTLGTAEGRAITTLEGLGTPEAPHPVQAAFIAEQAAQCGYCLNGMIMTTVAFLARTPA HHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCC PTEDEARAALRYNLCRCGTHVEILRAVMRAAHGEASE CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SEPVQLQVNGTAHRFALPRSTPLIYVLRNDLGLNGPKFGCGLGECGACTVLMDGVAARS CCCEEEEECCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH CVTTLGTAEGRAITTLEGLGTPEAPHPVQAAFIAEQAAQCGYCLNGMIMTTVAFLARTPA HHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHHHHHHHCCCC PTEDEARAALRYNLCRCGTHVEILRAVMRAAHGEASE CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]