| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is bcp [H]
Identifier: 154248115
GI number: 154248115
Start: 4641206
End: 4641679
Strand: Reverse
Name: bcp [H]
Synonym: Xaut_4195
Alternate gene names: 154248115
Gene position: 4641679-4641206 (Counterclockwise)
Preceding gene: 154248118
Following gene: 154248111
Centisome position: 87.43
GC content: 65.4
Gene sequence:
>474_bases ATGTCGCAGTTTCCCGAAGCCGGAGCCAAGGCGCCGGCGTTCTCGCTCGCCCGCGATGGCGGTGGCACGGTGGCGCTCAA GGACTTCAAAGGCCGCAAGCTGGTGCTCTATTTCTACCCCAAGGCCAACACCACCGGCTGCACCAAGGAAGCCATCGCCT TCAACGGCCTGAAAGCCGCCTTCGCCGCCGCCGACACCGACATTCTCGGCGTCTCGGCCGATGCGGTGAGCGCGCAGGAC AAGTTCAAGGCCAAGTACGACCTCGCCTTTCCGTTGGGCTCGGACCCGGACAAGGCGATGCTGGAAGCCTACGGCGTCTG GGTCGAAAAGAGCATGTACGGCCGCAAGTACATGGGCATCGAGCGGGCGACCCTGCTGATCGGCCGCGACGGCAAGGTGG CCCGCACCTGGCCAAAGGTGAAAGTGGCCGGGCACGCCGAAGAGGTACTCAAGGCGGCGCAGGAGCTGGGCTGA
Upstream 100 bases:
>100_bases CCATGTGCGCCGGGAAGGCGGCCAAGTTGTGGGTCGCCAGAGCCACGAGAACGTGCCGCTCACCCCCGTAATGGCGCTGA ACACGTCGAAAGGAAGGCGG
Downstream 100 bases:
>100_bases GGCCAGTCCACGATGGTGGTCGATGCCTGATCGGCCGCCATCGCCCCGTGCCATCCCCCGCGCGTCCGGGGAACACTCCT CCCCTACCCCGCCCAATTCA
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSQFPEAGAKAPAFSLARDGGGTVALKDFKGRKLVLYFYPKANTTGCTKEAIAFNGLKAAFAAADTDILGVSADAVSAQD KFKAKYDLAFPLGSDPDKAMLEAYGVWVEKSMYGRKYMGIERATLLIGRDGKVARTWPKVKVAGHAEEVLKAAQELG
Sequences:
>Translated_157_residues MSQFPEAGAKAPAFSLARDGGGTVALKDFKGRKLVLYFYPKANTTGCTKEAIAFNGLKAAFAAADTDILGVSADAVSAQD KFKAKYDLAFPLGSDPDKAMLEAYGVWVEKSMYGRKYMGIERATLLIGRDGKVARTWPKVKVAGHAEEVLKAAQELG >Mature_156_residues SQFPEAGAKAPAFSLARDGGGTVALKDFKGRKLVLYFYPKANTTGCTKEAIAFNGLKAAFAAADTDILGVSADAVSAQDK FKAKYDLAFPLGSDPDKAMLEAYGVWVEKSMYGRKYMGIERATLLIGRDGKVARTWPKVKVAGHAEEVLKAAQELG
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=149, Percent_Identity=40.2684563758389, Blast_Score=115, Evalue=1e-27,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16784; Mature: 16653
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQFPEAGAKAPAFSLARDGGGTVALKDFKGRKLVLYFYPKANTTGCTKEAIAFNGLKAA CCCCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHCCHHHH FAAADTDILGVSADAVSAQDKFKAKYDLAFPLGSDPDKAMLEAYGVWVEKSMYGRKYMGI HHHCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCC ERATLLIGRDGKVARTWPKVKVAGHAEEVLKAAQELG EEEEEEEECCCCEEECCCCEEECCCHHHHHHHHHHCC >Mature Secondary Structure SQFPEAGAKAPAFSLARDGGGTVALKDFKGRKLVLYFYPKANTTGCTKEAIAFNGLKAA CCCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHCCHHHH FAAADTDILGVSADAVSAQDKFKAKYDLAFPLGSDPDKAMLEAYGVWVEKSMYGRKYMGI HHHCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCC ERATLLIGRDGKVARTWPKVKVAGHAEEVLKAAQELG EEEEEEEECCCCEEECCCCEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]