| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154248096
Identifier: 154248096
GI number: 154248096
Start: 4622680
End: 4623213
Strand: Reverse
Name: 154248096
Synonym: Xaut_4176
Alternate gene names: NA
Gene position: 4623213-4622680 (Counterclockwise)
Preceding gene: 154248097
Following gene: 154248092
Centisome position: 87.08
GC content: 68.35
Gene sequence:
>534_bases ATGAGCCAGTCCAATGCGGACCTGAGCCTGCTCGGCGTCTTCTCCCTCCTGTCCCTGCTGGCCATCGGCGGCGGCACGGC GGTGCTGCCGGAGATGAAGTCGCTCACGGTGGACGCCCACCAGTGGATCACCGACGGGCAGTTCCGCGACATCTACGCTC TCGGCCAGGTGGCGCCGGGGCCCAACATGCTGATGGTGATCGTCATCGGCTATCACGTGGCCGGCACGCCGGGGGCGCTC ATCGCCTTCACCGGCTTCTTCCTGCCGGCCTCCACCCTCGCCCTGGGCGCGTCCCGCCTGTGGAACCACTTCGAGGGATC GCCGTGGCGACTGGCGCTGCAGAATGCGCTGGCGCCCATCGTGGTGGGCCTCATGGCGGCTGGCATGATTGCCATCGCCC GCACCGCCATTACCGGCACCGAGACCACGCTGCTGGCGGTGGCGGTGTTCGCGCTCGTTTATTTCGGGCCGAAGATCAAC CCGGCCCTGCTCATCCTCGCCGGCGGGGCGGTGGGCTACCTGACGCTATCGTAG
Upstream 100 bases:
>100_bases TCTCCCTGCTGGCGGTGCTGCTCACGGTGCTGCCGCTGGCCCTGTTCATCTATCGGCCGCGCAACGACGACCGTCCCAAG ATCACCGAGGAGGAGGCACA
Downstream 100 bases:
>100_bases GGCCGACGCCCCGCTGGTCGCTGCAGATGCTCTACTTGCCGGAAAAGACCGGGTGCGCCACCCGGTCGCCTGCCTTGATG CCGAGCTTGCGCGCCTGGCC
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSQSNADLSLLGVFSLLSLLAIGGGTAVLPEMKSLTVDAHQWITDGQFRDIYALGQVAPGPNMLMVIVIGYHVAGTPGAL IAFTGFFLPASTLALGASRLWNHFEGSPWRLALQNALAPIVVGLMAAGMIAIARTAITGTETTLLAVAVFALVYFGPKIN PALLILAGGAVGYLTLS
Sequences:
>Translated_177_residues MSQSNADLSLLGVFSLLSLLAIGGGTAVLPEMKSLTVDAHQWITDGQFRDIYALGQVAPGPNMLMVIVIGYHVAGTPGAL IAFTGFFLPASTLALGASRLWNHFEGSPWRLALQNALAPIVVGLMAAGMIAIARTAITGTETTLLAVAVFALVYFGPKIN PALLILAGGAVGYLTLS >Mature_176_residues SQSNADLSLLGVFSLLSLLAIGGGTAVLPEMKSLTVDAHQWITDGQFRDIYALGQVAPGPNMLMVIVIGYHVAGTPGALI AFTGFFLPASTLALGASRLWNHFEGSPWRLALQNALAPIVVGLMAAGMIAIARTAITGTETTLLAVAVFALVYFGPKINP ALLILAGGAVGYLTLS
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 18308; Mature: 18177
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSNADLSLLGVFSLLSLLAIGGGTAVLPEMKSLTVDAHQWITDGQFRDIYALGQVAPG CCCCCCCHHHHHHHHHHHHHHHCCCCEECCCHHHCEECHHHHCCCCCCHHHHEECCCCCC PNMLMVIVIGYHVAGTPGALIAFTGFFLPASTLALGASRLWNHFEGSPWRLALQNALAPI CCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VVGLMAAGMIAIARTAITGTETTLLAVAVFALVYFGPKINPALLILAGGAVGYLTLS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEC >Mature Secondary Structure SQSNADLSLLGVFSLLSLLAIGGGTAVLPEMKSLTVDAHQWITDGQFRDIYALGQVAPG CCCCCCHHHHHHHHHHHHHHHCCCCEECCCHHHCEECHHHHCCCCCCHHHHEECCCCCC PNMLMVIVIGYHVAGTPGALIAFTGFFLPASTLALGASRLWNHFEGSPWRLALQNALAPI CCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VVGLMAAGMIAIARTAITGTETTLLAVAVFALVYFGPKINPALLILAGGAVGYLTLS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]