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The map label for this gene is yfiM [H]

Identifier: 154248052

GI number: 154248052

Start: 4571745

End: 4572935

Strand: Reverse

Name: yfiM [H]

Synonym: Xaut_4131

Alternate gene names: 154248052

Gene position: 4572935-4571745 (Counterclockwise)

Preceding gene: 154248053

Following gene: 154248051

Centisome position: 86.14

GC content: 71.28

Gene sequence:

>1191_bases
ATGATGATCGCCATCGTCCGGGCCATGGTGCTCACTCTGATGCGCGACCGCGGCGCGCTGCTGATGACCTTCGTCCTGCC
GCCGGTGCTGTTCGTGCTGTTCGCGGCGGTGTTCGCCGGCACCGGCGGTGAGGCGTCCAGCATCAAGGTCGCAGCCGCAC
GGGCCACCGATGCCCCCGCCGCCCGGATGCTGCTCGACGCCCTCGCCCGCGCACCGGATGTCCACCTGACACCGGTGGTC
CCCGAAGATGTGGCCTTGCGCGTGGCGGACGGGCGCGCCGACGTGGGCCTGATCGTACGCGGGGACGTAGCCGCCGCCAC
CGACAAGCCGCCGCTGGTGATCATCACCGACGCCGGCCGCAACGTGGCGGCAGCGCTGCTCGCCGCCCGCGTCCAGCGCG
TATTCACCGAGGAATTGCCAGGCCTCGCCATGCGGCGGGTGGCAGGGCAGATCGAGGTGCTGGTGGGGCCGTTCTCCGCC
GAGCAGAAAGCGCGGCTCGACGATTCGGTGTCGCGCGCACCGGAGCTGGTGGCCCAGGGCGGCGCCGATCTGATGGAGCG
CCAGCCCCTCGCCAGTCGCCGGGCAGAGCCGGGGGTGAGCTATTATGCCGGCGCCATCGCCATGCTGTTCCTGCTGTTCG
CGGCGGTACAGGGGGCCGCGAGCCTGGTGGATGAACGCCGCTCGGGGGTGTTCGACCGCATTGTCATGAGCCGGGGCGGC
GTGCTGGCGCTGGTGGGCGGCAAGCTGTTCTTCCTGATCCTGCAGGGGCTGGCGCTCGCCGCCGTGCTGTTCGCGGTGGC
GCAGATCGTCTATGGCGTGCACGTCATCCAGCATCTGGGCATCGTCGCTCTGGTGGCAACGGCGGCCTCGGCGGCGGCGG
CGGGCATCGCCTTGCCGCTGGCGGCCGTGGCGCGCACCCGCCATCAGGCACAGACCCTCTCCACCTTCGCAGTGCTGCTG
CTCTCAGCGGTTGGTGGCAGCATGGTGCCCCGCTTCCTGATGCCGGAATGGCTCCAGAACCTCGGCGTGCTGACGCCCAC
CGCCTGGGGCATCGAGGCGTTCCAGGGCGCGCTGTGGCGCGGCGACGGCCTCGGCGATCTCGCCTTGTCCCTCGCCATCT
TGCTCGCCTATGGCGCGGTCGGGGCGGGCTTCACCCTGTGGCTGATCCGCCGGCAGGTGCGGCTGGCCTGA

Upstream 100 bases:

>100_bases
TCGCGGCCCTGAAGGGGGCAGGGCTGGTGCCCCGCACCCTGTCGCTCCAGGCCGCCGGGCTCGATGCGCTCTACGCCTCC
GTCACCCGGAAGCCGTCCCC

Downstream 100 bases:

>100_bases
CCTTCCGGGCCCAACCGCCCCCCTGCGACACGAAATCCTGAACGGCGAGAGCGCTTCCCTCCGGCGCGCGGGCGCTTTAG
AACCGCGCCATGGCGATCCT

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MMIAIVRAMVLTLMRDRGALLMTFVLPPVLFVLFAAVFAGTGGEASSIKVAAARATDAPAARMLLDALARAPDVHLTPVV
PEDVALRVADGRADVGLIVRGDVAAATDKPPLVIITDAGRNVAAALLAARVQRVFTEELPGLAMRRVAGQIEVLVGPFSA
EQKARLDDSVSRAPELVAQGGADLMERQPLASRRAEPGVSYYAGAIAMLFLLFAAVQGAASLVDERRSGVFDRIVMSRGG
VLALVGGKLFFLILQGLALAAVLFAVAQIVYGVHVIQHLGIVALVATAASAAAAGIALPLAAVARTRHQAQTLSTFAVLL
LSAVGGSMVPRFLMPEWLQNLGVLTPTAWGIEAFQGALWRGDGLGDLALSLAILLAYGAVGAGFTLWLIRRQVRLA

Sequences:

>Translated_396_residues
MMIAIVRAMVLTLMRDRGALLMTFVLPPVLFVLFAAVFAGTGGEASSIKVAAARATDAPAARMLLDALARAPDVHLTPVV
PEDVALRVADGRADVGLIVRGDVAAATDKPPLVIITDAGRNVAAALLAARVQRVFTEELPGLAMRRVAGQIEVLVGPFSA
EQKARLDDSVSRAPELVAQGGADLMERQPLASRRAEPGVSYYAGAIAMLFLLFAAVQGAASLVDERRSGVFDRIVMSRGG
VLALVGGKLFFLILQGLALAAVLFAVAQIVYGVHVIQHLGIVALVATAASAAAAGIALPLAAVARTRHQAQTLSTFAVLL
LSAVGGSMVPRFLMPEWLQNLGVLTPTAWGIEAFQGALWRGDGLGDLALSLAILLAYGAVGAGFTLWLIRRQVRLA
>Mature_396_residues
MMIAIVRAMVLTLMRDRGALLMTFVLPPVLFVLFAAVFAGTGGEASSIKVAAARATDAPAARMLLDALARAPDVHLTPVV
PEDVALRVADGRADVGLIVRGDVAAATDKPPLVIITDAGRNVAAALLAARVQRVFTEELPGLAMRRVAGQIEVLVGPFSA
EQKARLDDSVSRAPELVAQGGADLMERQPLASRRAEPGVSYYAGAIAMLFLLFAAVQGAASLVDERRSGVFDRIVMSRGG
VLALVGGKLFFLILQGLALAAVLFAVAQIVYGVHVIQHLGIVALVATAASAAAAGIALPLAAVARTRHQAQTLSTFAVLL
LSAVGGSMVPRFLMPEWLQNLGVLTPTAWGIEAFQGALWRGDGLGDLALSLAILLAYGAVGAGFTLWLIRRQVRLA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41313; Mature: 41313

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIAIVRAMVLTLMRDRGALLMTFVLPPVLFVLFAAVFAGTGGEASSIKVAAARATDAPA
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHH
ARMLLDALARAPDVHLTPVVPEDVALRVADGRADVGLIVRGDVAAATDKPPLVIITDAGR
HHHHHHHHHCCCCCEECCCCCCCCEEEEECCCCCEEEEEECCEECCCCCCCEEEEECCCC
NVAAALLAARVQRVFTEELPGLAMRRVAGQIEVLVGPFSAEQKARLDDSVSRAPELVAQG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCCHHHHHCCHHHHHHHHHHHCC
GADLMERQPLASRRAEPGVSYYAGAIAMLFLLFAAVQGAASLVDERRSGVFDRIVMSRGG
CHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VLALVGGKLFFLILQGLALAAVLFAVAQIVYGVHVIQHLGIVALVATAASAAAAGIALPL
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVARTRHQAQTLSTFAVLLLSAVGGSMVPRFLMPEWLQNLGVLTPTAWGIEAFQGALWR
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
GDGLGDLALSLAILLAYGAVGAGFTLWLIRRQVRLA
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MMIAIVRAMVLTLMRDRGALLMTFVLPPVLFVLFAAVFAGTGGEASSIKVAAARATDAPA
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHH
ARMLLDALARAPDVHLTPVVPEDVALRVADGRADVGLIVRGDVAAATDKPPLVIITDAGR
HHHHHHHHHCCCCCEECCCCCCCCEEEEECCCCCEEEEEECCEECCCCCCCEEEEECCCC
NVAAALLAARVQRVFTEELPGLAMRRVAGQIEVLVGPFSAEQKARLDDSVSRAPELVAQG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCCHHHHHCCHHHHHHHHHHHCC
GADLMERQPLASRRAEPGVSYYAGAIAMLFLLFAAVQGAASLVDERRSGVFDRIVMSRGG
CHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VLALVGGKLFFLILQGLALAAVLFAVAQIVYGVHVIQHLGIVALVATAASAAAAGIALPL
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVARTRHQAQTLSTFAVLLLSAVGGSMVPRFLMPEWLQNLGVLTPTAWGIEAFQGALWR
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC
GDGLGDLALSLAILLAYGAVGAGFTLWLIRRQVRLA
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]