Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is 154248019

Identifier: 154248019

GI number: 154248019

Start: 4535778

End: 4536518

Strand: Reverse

Name: 154248019

Synonym: Xaut_4098

Alternate gene names: NA

Gene position: 4536518-4535778 (Counterclockwise)

Preceding gene: 154248020

Following gene: 154248017

Centisome position: 85.45

GC content: 74.36

Gene sequence:

>741_bases
ATGACCCTGCATGTGACCCTGCCCCCGGCATCGCGGCCGGGCCTGCTCGCCTCCGTGGCCGATCTTGCCGAGATGGAGGT
GGCGCTCGGCGCCGGCGCCGACATCGTGGACCTGAAGAACCCGGCCGAGGGGGCGCTCGGCGCCTGGGCGGAGGCGCCGC
TCAAGGCCGCCGTCGCCCGCTGGCGCGCGGCGGGCTGCGTCACCGGCCTCAGCGCCACCGTGGGCGACCAGCCCCTGGAC
GCCGCGACCATCCTTGCCGCCGCCCGGCGCACCGCCTCGACCGGCGTGCCGCTGGTGAAGATCGGCTTTCCCCTGCCCTT
GGACGGCGCCGGGGCGGCGCTGGCCCCAGTCCTCGATGCCCTGCGGCCGCTGGCGCTGGAGACGCGGCTCATCGCGGTTC
TGTTCGCCGACCAGGATCCGGACCTCTCCACCATCGCCCAATTCGCCGAAGCCGGCTTCCACGGGGTGATGCTGGATACG
GCGGACAAGGCGGCCGGCGGCCTCCTCGCCCACCTCCCGGTGCCGCGCCTCGCCGGCTTTGTGGCAGAGGCCAGGGCGGC
CGGCCTGCTCACCGGCCTTGCGGGCTCCCTGAAGCTTCAGGACATCGCGCCTCTGGCAACGCTCAAACCCCACTATCTCG
GCTTCCGCGGCGCCCTGTGCGCGACCGGGCGCACCAGCGCCCTCGACCCGGCACAGCTCGCTCGGGTGCGGGAGGAACTG
AAGGGACGGGTGGCGGCCTGA

Upstream 100 bases:

>100_bases
ATCTCTCCATCGCCATCGAGAAGACCGCCGGCCCCGCCGAGCGCGAGGCATGGGACTGGCTGTGCGAGACCATCGCCGAC
CACCGGGCGCGGGCGGCATC

Downstream 100 bases:

>100_bases
CGGGCGGGGATGGCACCGGCGCTGTCCGCTTTCGGGCAATCAAGGCGAGCCGACCCGCGATCACTCCGTCATGCCCGGCC
TTGTGCCGGGTATCCACGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTLHVTLPPASRPGLLASVADLAEMEVALGAGADIVDLKNPAEGALGAWAEAPLKAAVARWRAAGCVTGLSATVGDQPLD
AATILAAARRTASTGVPLVKIGFPLPLDGAGAALAPVLDALRPLALETRLIAVLFADQDPDLSTIAQFAEAGFHGVMLDT
ADKAAGGLLAHLPVPRLAGFVAEARAAGLLTGLAGSLKLQDIAPLATLKPHYLGFRGALCATGRTSALDPAQLARVREEL
KGRVAA

Sequences:

>Translated_246_residues
MTLHVTLPPASRPGLLASVADLAEMEVALGAGADIVDLKNPAEGALGAWAEAPLKAAVARWRAAGCVTGLSATVGDQPLD
AATILAAARRTASTGVPLVKIGFPLPLDGAGAALAPVLDALRPLALETRLIAVLFADQDPDLSTIAQFAEAGFHGVMLDT
ADKAAGGLLAHLPVPRLAGFVAEARAAGLLTGLAGSLKLQDIAPLATLKPHYLGFRGALCATGRTSALDPAQLARVREEL
KGRVAA
>Mature_245_residues
TLHVTLPPASRPGLLASVADLAEMEVALGAGADIVDLKNPAEGALGAWAEAPLKAAVARWRAAGCVTGLSATVGDQPLDA
ATILAAARRTASTGVPLVKIGFPLPLDGAGAALAPVLDALRPLALETRLIAVLFADQDPDLSTIAQFAEAGFHGVMLDTA
DKAAGGLLAHLPVPRLAGFVAEARAAGLLTGLAGSLKLQDIAPLATLKPHYLGFRGALCATGRTSALDPAQLARVREELK
GRVAA

Specific function: Unknown

COG id: COG1891

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0264 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR007565 [H]

Pfam domain/function: PF04476 DUF556 [H]

EC number: NA

Molecular weight: Translated: 24872; Mature: 24741

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLHVTLPPASRPGLLASVADLAEMEVALGAGADIVDLKNPAEGALGAWAEAPLKAAVAR
CEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH
WRAAGCVTGLSATVGDQPLDAATILAAARRTASTGVPLVKIGFPLPLDGAGAALAPVLDA
HHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHH
LRPLALETRLIAVLFADQDPDLSTIAQFAEAGFHGVMLDTADKAAGGLLAHLPVPRLAGF
HHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHCCEEECCCHHHHHHH
VAEARAAGLLTGLAGSLKLQDIAPLATLKPHYLGFRGALCATGRTSALDPAQLARVREEL
HHHHHHHHHHHHHCCCCCHHHCCCHHHCCCHHCCCCCCEECCCCCCCCCHHHHHHHHHHH
KGRVAA
CCCCCC
>Mature Secondary Structure 
TLHVTLPPASRPGLLASVADLAEMEVALGAGADIVDLKNPAEGALGAWAEAPLKAAVAR
EEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH
WRAAGCVTGLSATVGDQPLDAATILAAARRTASTGVPLVKIGFPLPLDGAGAALAPVLDA
HHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHH
LRPLALETRLIAVLFADQDPDLSTIAQFAEAGFHGVMLDTADKAAGGLLAHLPVPRLAGF
HHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHCCEEECCCHHHHHHH
VAEARAAGLLTGLAGSLKLQDIAPLATLKPHYLGFRGALCATGRTSALDPAQLARVREEL
HHHHHHHHHHHHHCCCCCHHHCCCHHHCCCHHCCCCCCEECCCCCCCCCHHHHHHHHHHH
KGRVAA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA