| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is purL [H]
Identifier: 154248011
GI number: 154248011
Start: 4528049
End: 4530298
Strand: Reverse
Name: purL [H]
Synonym: Xaut_4090
Alternate gene names: 154248011
Gene position: 4530298-4528049 (Counterclockwise)
Preceding gene: 154248012
Following gene: 154248010
Centisome position: 85.33
GC content: 67.82
Gene sequence:
>2250_bases GTGACCACGCCCCTCAATTCGGATCGAACCGCTGTGAATTCCATTCCCAACACGTCCCGCATCACCCCGGAGCTGGTGGC CGAGCATGGCCTGAAGCCCGAGGAATACGAGCACTTCGTGAAGCTGATCGGCCGCGAGCCGTCGATCACGGAGCTTGGCA TCGTCTCGGCCATGTGGAACGAGCACTGCTCCTACAAGTCATCCAAGGTCTGGCTGCGCACCCTGCCCACCAAAAGCCCG CGGGTGATCCAGGGGCCGGGCGAGAATGCGGGCGTGGTGGACATCGGCAACGGCCTCGCGGTCGTCTTCAAGATGGAAAG CCACAACCACCCCTCCTTCATCGAGCCTTACCAGGGTGCGGGGACGGGCGTGGGCGGCATCCTGCGCGACGTGTTCACCA TGGGCGCGCGGCCCATCGCGGCGCTCAACTTCCTGCGCTTCGGCGACTGCCACAATGTGAAGACCCGCCGGCTGCTGGCG GGCGTGGTGGCCGGCATCGGCGGCTATGGCAATTCCTTCGGCGTGCCCACGGTGGGTGGCTCGGTGGGCTTCCACAAGCG CTACAACGGCAACATCCTGGTCAACGCCATGGCGGTGGGCCTCGCCAGGGCGGACGAGATCTTCTACGCCGCCGCCACCG GTGTGGGCCGCGCCATCGTCTATCTGGGCTCCAAGACCGGCCGCGACGGCATCCACGGCGCCACCATGGCCTCGGCCGAG TTCGGCGCCGATGCCGAGGAGAAGCGCCCCACGGTGCAGGTGGGCGACCCCTTCGCCGAGAAGCTGCTGCTGGAAGCGTG CCTCGAAATCATGAAGGCGGGCTGCGTGGTGGCGATCCAGGACATGGGCGCTGCCGGCCTCACTAGCTCGGCGGTGGAGA TGGGCGCCAAGGGCGGCCTCGGTGTGGAGCTGAACCTCGACGCCGTGCCCTGCCGCGAAACCGGCATGACCGCCTACGAG ATGATGCTGTCCGAGAGCCAGGAGCGCATGCTCATGGTGATCGCCGACGGCAAGGAAGACGAGGCCGAAGCCATTTTCCG CAAGTGGGGACTGGACTTCGCCATTGTCGGCCGCACCACCGATACCCTGCGCTTCGTGGTGAAGCACAATGGCGTGGTGG AAGCCGACCTGCCCATCAAGGAACTCGGCGACCAGGCCCCCGAATACCGCCGCCCCTATGAGGAGCCGCTGCCGCGTCCG GTGGTGGCGCCCGAGGACGTGCGCACCAACGCCTCCGTGGCCGATGCCCTGGAGCGGCTCATCGCCTCGCCGGACCTGTG CTCCAAGCGCTGGGTGTGGGAGCAGTACGACCACCTGATCGGCGGCAATACCGTGCAGCGACCCGGCGGCGACGCCGCCG TGGTGCGCATCGAGGACGGCCCCAAGGCCCTGGCGCTGACCACCGACGTGACGCCCCGCTATTGCGAGGCCGATCCCTTC GAGGGCGGCAAGCAGGCAGTGGCCGAAGCCTGGCGCAACCTGACCGCAGTCGGCGCGACCCCCATCGCCGTCACCGACAA CCTGAATTTCGGCAATCCCGAGAAGCCGGAGATCATGGGCCAGTTCGTGGCCTGTGTGAAAGGCATCGGCGCGGCCTGCG AGGCGCTGGACTTCCCGGTCGTGTCCGGCAACGTCAGCCTCTACAACGAGACCAACGGCAAGGGCATCCTGCCGACCCCC GCCATCGGCGGCGTCGGCCTGATCGAGGACCTGCACAAGTCCATGACGCTCGCCTTCAAGGCCGCTGGCGAGCCGGTGCT GCTGGTGGGCAAGACCACGGGCTGGCTCGGGTCCTCGGCCTTCCTCAACACCGTGTGCGAGCGCGAGGACGGGGCGCCGC CCCCGGTCGACCTCATCGCCGAGAAGCGCAACGGCGACTTCGTGCGCGGCCTGATCCGCGACGGCATCGCCACCGCCGTG CATGATGTCTCCGACGGCGGACTGCTCATCGCCATCGCCGAGATGGCCATGGCCGGGCGCGTGGGCACCTCGCTCGAAGC CCCGCCGGCCGGCATGGACCCTTATGCCTGGTGGTTCGGCGAGGACCAGGCCCGCTACGTGATCACCGTCCCCTCGGGAC AGGGCGCCGAAGTGATCCACAAGGCGGAAATGGCCGGCGTGCCGATGGTCAAGATCGGCAAGACCGGCGGCGACCGCTTG ATCCTCCCCGACGACCGCTCGATAGTCGTGGAATCGCTGCGCGACCGGCACGAGACGTGGCTGCCCATCTATATGGGTGC CTCGTCCTGA
Upstream 100 bases:
>100_bases TTGGAATGATGCCGCATCCCGAAAATTACATCGAACCGGAAATCGGCCCCACCGACGGCCGCGGCCTGTTCGAAAGCCTC GCCGGAGCCCTGAAGGCGGC
Downstream 100 bases:
>100_bases TCCTGTCCGCTGTTTTGAGGACCATGCGACCATGCCCATGAATGCCCGCGAGATCGAGCAGCTCATCAAGGATGCGCTGC CCGACGCGACGGTGGTGATC
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II [H]
Number of amino acids: Translated: 749; Mature: 748
Protein sequence:
>749_residues MTTPLNSDRTAVNSIPNTSRITPELVAEHGLKPEEYEHFVKLIGREPSITELGIVSAMWNEHCSYKSSKVWLRTLPTKSP RVIQGPGENAGVVDIGNGLAVVFKMESHNHPSFIEPYQGAGTGVGGILRDVFTMGARPIAALNFLRFGDCHNVKTRRLLA GVVAGIGGYGNSFGVPTVGGSVGFHKRYNGNILVNAMAVGLARADEIFYAAATGVGRAIVYLGSKTGRDGIHGATMASAE FGADAEEKRPTVQVGDPFAEKLLLEACLEIMKAGCVVAIQDMGAAGLTSSAVEMGAKGGLGVELNLDAVPCRETGMTAYE MMLSESQERMLMVIADGKEDEAEAIFRKWGLDFAIVGRTTDTLRFVVKHNGVVEADLPIKELGDQAPEYRRPYEEPLPRP VVAPEDVRTNASVADALERLIASPDLCSKRWVWEQYDHLIGGNTVQRPGGDAAVVRIEDGPKALALTTDVTPRYCEADPF EGGKQAVAEAWRNLTAVGATPIAVTDNLNFGNPEKPEIMGQFVACVKGIGAACEALDFPVVSGNVSLYNETNGKGILPTP AIGGVGLIEDLHKSMTLAFKAAGEPVLLVGKTTGWLGSSAFLNTVCEREDGAPPPVDLIAEKRNGDFVRGLIRDGIATAV HDVSDGGLLIAIAEMAMAGRVGTSLEAPPAGMDPYAWWFGEDQARYVITVPSGQGAEVIHKAEMAGVPMVKIGKTGGDRL ILPDDRSIVVESLRDRHETWLPIYMGASS
Sequences:
>Translated_749_residues MTTPLNSDRTAVNSIPNTSRITPELVAEHGLKPEEYEHFVKLIGREPSITELGIVSAMWNEHCSYKSSKVWLRTLPTKSP RVIQGPGENAGVVDIGNGLAVVFKMESHNHPSFIEPYQGAGTGVGGILRDVFTMGARPIAALNFLRFGDCHNVKTRRLLA GVVAGIGGYGNSFGVPTVGGSVGFHKRYNGNILVNAMAVGLARADEIFYAAATGVGRAIVYLGSKTGRDGIHGATMASAE FGADAEEKRPTVQVGDPFAEKLLLEACLEIMKAGCVVAIQDMGAAGLTSSAVEMGAKGGLGVELNLDAVPCRETGMTAYE MMLSESQERMLMVIADGKEDEAEAIFRKWGLDFAIVGRTTDTLRFVVKHNGVVEADLPIKELGDQAPEYRRPYEEPLPRP VVAPEDVRTNASVADALERLIASPDLCSKRWVWEQYDHLIGGNTVQRPGGDAAVVRIEDGPKALALTTDVTPRYCEADPF EGGKQAVAEAWRNLTAVGATPIAVTDNLNFGNPEKPEIMGQFVACVKGIGAACEALDFPVVSGNVSLYNETNGKGILPTP AIGGVGLIEDLHKSMTLAFKAAGEPVLLVGKTTGWLGSSAFLNTVCEREDGAPPPVDLIAEKRNGDFVRGLIRDGIATAV HDVSDGGLLIAIAEMAMAGRVGTSLEAPPAGMDPYAWWFGEDQARYVITVPSGQGAEVIHKAEMAGVPMVKIGKTGGDRL ILPDDRSIVVESLRDRHETWLPIYMGASS >Mature_748_residues TTPLNSDRTAVNSIPNTSRITPELVAEHGLKPEEYEHFVKLIGREPSITELGIVSAMWNEHCSYKSSKVWLRTLPTKSPR VIQGPGENAGVVDIGNGLAVVFKMESHNHPSFIEPYQGAGTGVGGILRDVFTMGARPIAALNFLRFGDCHNVKTRRLLAG VVAGIGGYGNSFGVPTVGGSVGFHKRYNGNILVNAMAVGLARADEIFYAAATGVGRAIVYLGSKTGRDGIHGATMASAEF GADAEEKRPTVQVGDPFAEKLLLEACLEIMKAGCVVAIQDMGAAGLTSSAVEMGAKGGLGVELNLDAVPCRETGMTAYEM MLSESQERMLMVIADGKEDEAEAIFRKWGLDFAIVGRTTDTLRFVVKHNGVVEADLPIKELGDQAPEYRRPYEEPLPRPV VAPEDVRTNASVADALERLIASPDLCSKRWVWEQYDHLIGGNTVQRPGGDAAVVRIEDGPKALALTTDVTPRYCEADPFE GGKQAVAEAWRNLTAVGATPIAVTDNLNFGNPEKPEIMGQFVACVKGIGAACEALDFPVVSGNVSLYNETNGKGILPTPA IGGVGLIEDLHKSMTLAFKAAGEPVLLVGKTTGWLGSSAFLNTVCEREDGAPPPVDLIAEKRNGDFVRGLIRDGIATAVH DVSDGGLLIAIAEMAMAGRVGTSLEAPPAGMDPYAWWFGEDQARYVITVPSGQGAEVIHKAEMAGVPMVKIGKTGGDRLI LPDDRSIVVESLRDRHETWLPIYMGASS
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family [H]
Homologues:
Organism=Homo sapiens, GI31657129, Length=698, Percent_Identity=26.647564469914, Blast_Score=111, Evalue=2e-24, Organism=Escherichia coli, GI48994899, Length=805, Percent_Identity=24.8447204968944, Blast_Score=144, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17553022, Length=698, Percent_Identity=23.0659025787966, Blast_Score=105, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6321498, Length=739, Percent_Identity=23.1393775372125, Blast_Score=121, Evalue=5e-28, Organism=Drosophila melanogaster, GI24582111, Length=739, Percent_Identity=24.3572395128552, Blast_Score=107, Evalue=3e-23, Organism=Drosophila melanogaster, GI24582109, Length=739, Percent_Identity=24.3572395128552, Blast_Score=107, Evalue=3e-23, Organism=Drosophila melanogaster, GI17137292, Length=739, Percent_Identity=24.3572395128552, Blast_Score=107, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.5.3 [H]
Molecular weight: Translated: 79741; Mature: 79610
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPLNSDRTAVNSIPNTSRITPELVAEHGLKPEEYEHFVKLIGREPSITELGIVSAMWN CCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH EHCSYKSSKVWLRTLPTKSPRVIQGPGENAGVVDIGNGLAVVFKMESHNHPSFIEPYQGA HHCCCCCCCEEEEECCCCCCEEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCC GTGVGGILRDVFTMGARPIAALNFLRFGDCHNVKTRRLLAGVVAGIGGYGNSFGVPTVGG CCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC SVGFHKRYNGNILVNAMAVGLARADEIFYAAATGVGRAIVYLGSKTGRDGIHGATMASAE CCCCCEECCCCEEEEEHHHHHHHHHHEEEEECCCCCEEEEEECCCCCCCCCCCCEECCHH FGADAEEKRPTVQVGDPFAEKLLLEACLEIMKAGCVVAIQDMGAAGLTSSAVEMGAKGGL CCCCHHHCCCEEEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCCCCC GVELNLDAVPCRETGMTAYEMMLSESQERMLMVIADGKEDEAEAIFRKWGLDFAIVGRTT EEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEECCCC DTLRFVVKHNGVVEADLPIKELGDQAPEYRRPYEEPLPRPVVAPEDVRTNASVADALERL HHEEEEEECCCEEEECCCHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH IASPDLCSKRWVWEQYDHLIGGNTVQRPGGDAAVVRIEDGPKALALTTDVTPRYCEADPF HCCCCCHHHCCHHHHHHHHHCCCEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCC EGGKQAVAEAWRNLTAVGATPIAVTDNLNFGNPEKPEIMGQFVACVKGIGAACEALDFPV CCHHHHHHHHHHCEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCE VSGNVSLYNETNGKGILPTPAIGGVGLIEDLHKSMTLAFKAAGEPVLLVGKTTGWLGSSA EECCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCHH FLNTVCEREDGAPPPVDLIAEKRNGDFVRGLIRDGIATAVHDVSDGGLLIAIAEMAMAGR HHHHHHHHCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCC VGTSLEAPPAGMDPYAWWFGEDQARYVITVPSGQGAEVIHKAEMAGVPMVKIGKTGGDRL CCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCEE ILPDDRSIVVESLRDRHETWLPIYMGASS EECCCHHHHHHHHHHCCCCEEEEEECCCC >Mature Secondary Structure TTPLNSDRTAVNSIPNTSRITPELVAEHGLKPEEYEHFVKLIGREPSITELGIVSAMWN CCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH EHCSYKSSKVWLRTLPTKSPRVIQGPGENAGVVDIGNGLAVVFKMESHNHPSFIEPYQGA HHCCCCCCCEEEEECCCCCCEEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCC GTGVGGILRDVFTMGARPIAALNFLRFGDCHNVKTRRLLAGVVAGIGGYGNSFGVPTVGG CCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC SVGFHKRYNGNILVNAMAVGLARADEIFYAAATGVGRAIVYLGSKTGRDGIHGATMASAE CCCCCEECCCCEEEEEHHHHHHHHHHEEEEECCCCCEEEEEECCCCCCCCCCCCEECCHH FGADAEEKRPTVQVGDPFAEKLLLEACLEIMKAGCVVAIQDMGAAGLTSSAVEMGAKGGL CCCCHHHCCCEEEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCCCCC GVELNLDAVPCRETGMTAYEMMLSESQERMLMVIADGKEDEAEAIFRKWGLDFAIVGRTT EEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEECCCC DTLRFVVKHNGVVEADLPIKELGDQAPEYRRPYEEPLPRPVVAPEDVRTNASVADALERL HHEEEEEECCCEEEECCCHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH IASPDLCSKRWVWEQYDHLIGGNTVQRPGGDAAVVRIEDGPKALALTTDVTPRYCEADPF HCCCCCHHHCCHHHHHHHHHCCCEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCC EGGKQAVAEAWRNLTAVGATPIAVTDNLNFGNPEKPEIMGQFVACVKGIGAACEALDFPV CCHHHHHHHHHHCEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCE VSGNVSLYNETNGKGILPTPAIGGVGLIEDLHKSMTLAFKAAGEPVLLVGKTTGWLGSSA EECCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCHH FLNTVCEREDGAPPPVDLIAEKRNGDFVRGLIRDGIATAVHDVSDGGLLIAIAEMAMAGR HHHHHHHHCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCC VGTSLEAPPAGMDPYAWWFGEDQARYVITVPSGQGAEVIHKAEMAGVPMVKIGKTGGDRL CCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCEE ILPDDRSIVVESLRDRHETWLPIYMGASS EECCCHHHHHHHHHHCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA