| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247850
Identifier: 154247850
GI number: 154247850
Start: 4344232
End: 4345371
Strand: Reverse
Name: 154247850
Synonym: Xaut_3927
Alternate gene names: NA
Gene position: 4345371-4344232 (Counterclockwise)
Preceding gene: 154247852
Following gene: 154247847
Centisome position: 81.85
GC content: 69.82
Gene sequence:
>1140_bases ATGACCGTGACGACATCCGGCGTCTCATCGCCCTCCCCCTCCGCGCCGAAGGGCCTGCGGCTCGCCGCCGTCGCCATCGT CCGCGACGAGGCGGACGTGATCGAGGCGTTCGTGCGGCACAACCTCGCGGTGGTCGATCACCTCTTCATCGAGGACGACC ACAGCCGCGACGGCACCCGCGCCATCCTCGACGCCCTCGCTGCGGAAGGGTTGGCGGTGAGCGTGTTCGACGGCCCGCAG GAGGCGGCCTATTTCCAGGCGGCGCGCACCAAGGGCCTGCTGCAGCGCGCCTATGTGGTGGAGCGGTGGCATTTTGCCTT CCTGCTGGACGGTGATGAATTCCTGACCACGCCGGACCGTGCCAGCCTCGAGGCGGAACTGGCCAGCCTGCCGGACTCCC AGGCCGGCGGCCTGAGGATGTGGAACTACCTGCCCCGCCCGCTCGATGAGATCCCCGATCCCTTCAGCTTCTTCTCGGAT CGCACCCAGAAGCTCACCGGCTTCAGCGCCAAGGTGATGCTGCCGGCGAGCGTCGCCGCGAATGAAGAGCTGAAGATCGA GGACGGCAACCACGCCGCCTTCTGCTTCCGGCGCAAGGTGGTGGTGCACCAGTTGCAATCGGTCGCCCTCGCCCATTTCC CGGTGCGCAGCCACGACCAGATCGTCTCGAAGACGCTGGTGGCCTATTGCCGCTGGCGCACCCGGCCGGACTACGACCCC GCCACCACGGCGCTCGGCCCCATGGGCGCCATGGCGCTGCTGCGGGCCAATCCCGGGCTCAGGCTCGACAGCCTGGATGG CATCACCGCCTGCTACATGGGCGCCACCGGCCCGGAAGATACGGTGCAGCGCCCGTTCGAGCGGCTGGGAGCGGCGCGGC GCTACGACGGCCTCGCCGCGATCCGCCCCTATGACAAGGCGGCCTCTGCCATCGACACGGTGATCGCCGCCTCCCTGAGC CGTCTTGAGGCGGGCGGCGCAGCCTCGCGGCAGGCGGCGGAGAGCGGGCTTGCCAAGTTCCTGTCGAAGTCCCTGGTGGG GCGCTGGCGGGCACTGCGCGGCGGCCACACCACGCTCAAGGCAGAGTGGGACGGCACCGTCCGCCGCCTCAGCCGCTCCA TCAGGAAGCGGCTGGGCTGA
Upstream 100 bases:
>100_bases GGGGCGTGCGCGCAACGCCGGGCCGTGCGTTGCCGCCTCGCCTCGCCGCGCAGCCGGTGCTATAGCAGGCGCGAACGAGA ACCCCCATCGCCTCCCATTC
Downstream 100 bases:
>100_bases AAGCCCGTTTGAAAACTCAAGAAGGCAGAGCCGCGATCACCCTGTCATGCCCGGGACAAGCCCGGCCATGACGGTGACAA TACTCCTGCGACGGCGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTVTTSGVSSPSPSAPKGLRLAAVAIVRDEADVIEAFVRHNLAVVDHLFIEDDHSRDGTRAILDALAAEGLAVSVFDGPQ EAAYFQAARTKGLLQRAYVVERWHFAFLLDGDEFLTTPDRASLEAELASLPDSQAGGLRMWNYLPRPLDEIPDPFSFFSD RTQKLTGFSAKVMLPASVAANEELKIEDGNHAAFCFRRKVVVHQLQSVALAHFPVRSHDQIVSKTLVAYCRWRTRPDYDP ATTALGPMGAMALLRANPGLRLDSLDGITACYMGATGPEDTVQRPFERLGAARRYDGLAAIRPYDKAASAIDTVIAASLS RLEAGGAASRQAAESGLAKFLSKSLVGRWRALRGGHTTLKAEWDGTVRRLSRSIRKRLG
Sequences:
>Translated_379_residues MTVTTSGVSSPSPSAPKGLRLAAVAIVRDEADVIEAFVRHNLAVVDHLFIEDDHSRDGTRAILDALAAEGLAVSVFDGPQ EAAYFQAARTKGLLQRAYVVERWHFAFLLDGDEFLTTPDRASLEAELASLPDSQAGGLRMWNYLPRPLDEIPDPFSFFSD RTQKLTGFSAKVMLPASVAANEELKIEDGNHAAFCFRRKVVVHQLQSVALAHFPVRSHDQIVSKTLVAYCRWRTRPDYDP ATTALGPMGAMALLRANPGLRLDSLDGITACYMGATGPEDTVQRPFERLGAARRYDGLAAIRPYDKAASAIDTVIAASLS RLEAGGAASRQAAESGLAKFLSKSLVGRWRALRGGHTTLKAEWDGTVRRLSRSIRKRLG >Mature_378_residues TVTTSGVSSPSPSAPKGLRLAAVAIVRDEADVIEAFVRHNLAVVDHLFIEDDHSRDGTRAILDALAAEGLAVSVFDGPQE AAYFQAARTKGLLQRAYVVERWHFAFLLDGDEFLTTPDRASLEAELASLPDSQAGGLRMWNYLPRPLDEIPDPFSFFSDR TQKLTGFSAKVMLPASVAANEELKIEDGNHAAFCFRRKVVVHQLQSVALAHFPVRSHDQIVSKTLVAYCRWRTRPDYDPA TTALGPMGAMALLRANPGLRLDSLDGITACYMGATGPEDTVQRPFERLGAARRYDGLAAIRPYDKAASAIDTVIAASLSR LEAGGAASRQAAESGLAKFLSKSLVGRWRALRGGHTTLKAEWDGTVRRLSRSIRKRLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41257; Mature: 41126
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTTSGVSSPSPSAPKGLRLAAVAIVRDEADVIEAFVRHNLAVVDHLFIEDDHSRDGTR CEEECCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCHHHHHHHEECCCCCCCHHH AILDALAAEGLAVSVFDGPQEAAYFQAARTKGLLQRAYVVERWHFAFLLDGDEFLTTPDR HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHCCCCCC ASLEAELASLPDSQAGGLRMWNYLPRPLDEIPDPFSFFSDRTQKLTGFSAKVMLPASVAA HHHHHHHHHCCCCCCCCEEHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCEEEEECHHHCC NEELKIEDGNHAAFCFRRKVVVHQLQSVALAHFPVRSHDQIVSKTLVAYCRWRTRPDYDP CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC ATTALGPMGAMALLRANPGLRLDSLDGITACYMGATGPEDTVQRPFERLGAARRYDGLAA HHHHHCHHHHHHHHCCCCCCEEECCCCCHHEECCCCCCHHHHHHHHHHHCCHHHCCCEEE IRPYDKAASAIDTVIAASLSRLEAGGAASRQAAESGLAKFLSKSLVGRWRALRGGHTTLK ECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE AEWDGTVRRLSRSIRKRLG ECCCHHHHHHHHHHHHHCC >Mature Secondary Structure TVTTSGVSSPSPSAPKGLRLAAVAIVRDEADVIEAFVRHNLAVVDHLFIEDDHSRDGTR EEECCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHCCHHHHHHHEECCCCCCCHHH AILDALAAEGLAVSVFDGPQEAAYFQAARTKGLLQRAYVVERWHFAFLLDGDEFLTTPDR HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHCCCCCC ASLEAELASLPDSQAGGLRMWNYLPRPLDEIPDPFSFFSDRTQKLTGFSAKVMLPASVAA HHHHHHHHHCCCCCCCCEEHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCEEEEECHHHCC NEELKIEDGNHAAFCFRRKVVVHQLQSVALAHFPVRSHDQIVSKTLVAYCRWRTRPDYDP CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC ATTALGPMGAMALLRANPGLRLDSLDGITACYMGATGPEDTVQRPFERLGAARRYDGLAA HHHHHCHHHHHHHHCCCCCCEEECCCCCHHEECCCCCCHHHHHHHHHHHCCHHHCCCEEE IRPYDKAASAIDTVIAASLSRLEAGGAASRQAAESGLAKFLSKSLVGRWRALRGGHTTLK ECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE AEWDGTVRRLSRSIRKRLG ECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA