| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is ygaP [C]
Identifier: 154247822
GI number: 154247822
Start: 4316864
End: 4317253
Strand: Reverse
Name: ygaP [C]
Synonym: Xaut_3899
Alternate gene names: 154247822
Gene position: 4317253-4316864 (Counterclockwise)
Preceding gene: 154247830
Following gene: 154247809
Centisome position: 81.32
GC content: 69.74
Gene sequence:
>390_bases ATGCCCCAGACCATCACCAGAGGCTTCAAGCTGCTCCTTGAAGAAGCCAACGCCCGAGTCGAAACGCTGACGCCGCAGGA CGCCCAGCGCCGGATCGCCGAGGGCGCGCTGCTGGTGGACGTGCGGGACCCGCGCGAGCTGGAGCGGGAGGGCCGCATCC CCGGCGCCTTCCACTGTCCGCGCGGCATGCTGGAATTCTGGATCGACCCCGAGAGCCCCTATTTCAAGCCGCCTTTCGGG GAGGACCGGGCCTTCATCTTCCTCTGCGCGGGAGGCTGGCGCTCGGCCCTGTCGGCGGTCACGGCGCAGGACATGGGGCT GGATCCGGTGGCCCATGTGGGCGGCGGCTTCAAGGCCTGGAAGGACGCGGGCGGACCGGTGGAGGCCTAA
Upstream 100 bases:
>100_bases CAGCGGAAGGCTGAGCTGCGGAGCGGGCCGACTTGACAGGGCTTCCGGTCCTGCCGCCTCCTCCCCCAAACGATCGGTCC ATCGCACCGGAAGAGAGGCC
Downstream 100 bases:
>100_bases GCCCCCTACCCCACCGTGCCGTAGACCTGGTCCGCGCGGGCCTCGAAGGCGTCGGCGAAGCGGCGGAAGGCGGCATCGAA CATGGCGCCCATGAGCATGG
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Rhodanese Domain-Containing Protein; Rhodanese-Like Protein; Rhodanese Domain Protein Sulfur Transferase; Rhodanese-Related Sulfurtransferase; Sulfide Dehydrogenase; Molybdopterin Biosynthesis Protein MoeB; Rhodanese-Like Domain-Containing Protein; Molybdopterin Biosynthesis Protein; Beta-Lactamase-Like; Rhodanese-Like Domain Protein; Bifunctional Glyoxylase/Rhodanese-Like Sulfurtransferase; Metallo-Beta-Lactamase Family Protein; Rhodanese-Like; Rhodanese-Domain Protein; Rhodanese/Moeb/Thif Domain Protein
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MPQTITRGFKLLLEEANARVETLTPQDAQRRIAEGALLVDVRDPRELEREGRIPGAFHCPRGMLEFWIDPESPYFKPPFG EDRAFIFLCAGGWRSALSAVTAQDMGLDPVAHVGGGFKAWKDAGGPVEA
Sequences:
>Translated_129_residues MPQTITRGFKLLLEEANARVETLTPQDAQRRIAEGALLVDVRDPRELEREGRIPGAFHCPRGMLEFWIDPESPYFKPPFG EDRAFIFLCAGGWRSALSAVTAQDMGLDPVAHVGGGFKAWKDAGGPVEA >Mature_128_residues PQTITRGFKLLLEEANARVETLTPQDAQRRIAEGALLVDVRDPRELEREGRIPGAFHCPRGMLEFWIDPESPYFKPPFGE DRAFIFLCAGGWRSALSAVTAQDMGLDPVAHVGGGFKAWKDAGGPVEA
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14194; Mature: 14063
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQTITRGFKLLLEEANARVETLTPQDAQRRIAEGALLVDVRDPRELEREGRIPGAFHCP CCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCEEEEEECCCHHHHHCCCCCCCCCCC RGMLEFWIDPESPYFKPPFGEDRAFIFLCAGGWRSALSAVTAQDMGLDPVAHVGGGFKAW CCCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHCCCCCCHH KDAGGPVEA HCCCCCCCC >Mature Secondary Structure PQTITRGFKLLLEEANARVETLTPQDAQRRIAEGALLVDVRDPRELEREGRIPGAFHCP CCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCEEEEEECCCHHHHHCCCCCCCCCCC RGMLEFWIDPESPYFKPPFGEDRAFIFLCAGGWRSALSAVTAQDMGLDPVAHVGGGFKAW CCCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHCCCCCCHH KDAGGPVEA HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA