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The map label for this gene is ctrB [H]

Identifier: 154247736

GI number: 154247736

Start: 4226242

End: 4227492

Strand: Reverse

Name: ctrB [H]

Synonym: Xaut_3812

Alternate gene names: 154247736

Gene position: 4227492-4226242 (Counterclockwise)

Preceding gene: 154247742

Following gene: 154247735

Centisome position: 79.63

GC content: 69.62

Gene sequence:

>1251_bases
ATGGCGCCGCCACCCGCGTCCGCCGAGGCCCTCGTCAAACGCAATGCGCGCCTGCGCGAGGAGCTGCGCCGCCAGGCGCG
CGAGGCGCGTCTGCGACAATCGGTCGTTCGGCCCACCAGCGCCGCGTTCTGGAGCGCGGAGGTGCGCGCCATCGCCGCGT
TCAAGCTGCCGCTGATGGCAAGCTTCATCGTGATCGTGGTGGTGCCCTCCCTGATCGTGGCCGCCTATTTCATCTTCTTC
GCCTCCAGCCAGTATCTGTCGGAAGCGCGCTTCGCGGTGCGCACCTCCGAGCATGCGGGCATCGAGAACCTCTCCTCCGA
CGCCGCCGCGCAGGGCCTGTCGGAAGTGCAGGATTCCCTCATCATCGCCAATTACGTGAAGAGCCTCGCCGTGGTGGCGG
CGCTGGACGAGCGCATCGGCCTGCGCAAGCTGTTCTCGCGCCCGAGCATCGACTGGTTCTCCCGCTTCAACCCGGACCGC
CCCATCGAGCGGCTGGAGCGCAGCTGGCGCAGCCAGATCGACACCGCCATCGAATCCCCCTCCGGCATCATCACGGTGAA
GGTGTGGGCCTTCTCCCCCGAGGATTCGCTCACCATCGCCGACGCCATCGTCGGCCTCAGCGAGGACATGGTGAACAAGC
TCGGCGAGCGCACCCGCAAGGATGCCATCGCCCAGAGCCAGGCCGAGCTGGAGCGCGCCGAGGCCCGCCTGCGCAAGGCC
CGCGCCGCGGTGCGCGACCTGCGCAACGAGGTCGGCGTCATCGATCCCGCCCGCACCAACGAGGGCATCGCCAAGCTGCT
CGGCGACCTCGAAAGCGACCTCGTGCTCATCGACCAGGAGCTGGGCACCGCCCGCCGCACCCTGAGCCCGGACGCCCCGC
AGTTCGGCCTTTTGGAGGCGCGCCGCCAGGCCATCCGCGACAACATCACCGCCCTGAAGGCGCGCCTCACCACGGCCGGC
GGTCCCGACAAGGACACCCTCTCCGCCATCATGACGCGCTACGACACCCTCGACCTCGAGCGCCAGATCGCCGAGCGGCA
GTACACCGCGGCCGCCACCGCGCTGGAACAGGCGCGGGTGGCCGCCGAGCGGCAGGGCATGTATCTGGCCACCTTCGTGA
AGCCCGTGCGCGCGCAGGAGAGCGACTGGCCCCACCGCTTCTGGATGCCGCTGGCGGCGGCGCTGGCCTTCTGCCTCCTC
TGGCTCGTCATCGTCTCGGCGTTCGAGCTGATGCGCCACCTGAAGGCTTGA

Upstream 100 bases:

>100_bases
TGCTAGCTGCCGCAGAGGTTCGGGAAGTGACTGAAGATATGGTCGCCATCGGGTGGGAGAGGGTGGCGCGGTGAACCAGA
CCGTCGCACGGGTCGAGTAT

Downstream 100 bases:

>100_bases
GGCTGCACGATGATCGTCACCGACCGCCTCACCAAGACCTACTGGACCCACCTGCGGCGCAAGGTGGTGCTCAGCAACGT
CTCCGTCACCCTCGATCCGC

Product: capsule polysaccharide export protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MAPPPASAEALVKRNARLREELRRQAREARLRQSVVRPTSAAFWSAEVRAIAAFKLPLMASFIVIVVVPSLIVAAYFIFF
ASSQYLSEARFAVRTSEHAGIENLSSDAAAQGLSEVQDSLIIANYVKSLAVVAALDERIGLRKLFSRPSIDWFSRFNPDR
PIERLERSWRSQIDTAIESPSGIITVKVWAFSPEDSLTIADAIVGLSEDMVNKLGERTRKDAIAQSQAELERAEARLRKA
RAAVRDLRNEVGVIDPARTNEGIAKLLGDLESDLVLIDQELGTARRTLSPDAPQFGLLEARRQAIRDNITALKARLTTAG
GPDKDTLSAIMTRYDTLDLERQIAERQYTAAATALEQARVAAERQGMYLATFVKPVRAQESDWPHRFWMPLAAALAFCLL
WLVIVSAFELMRHLKA

Sequences:

>Translated_416_residues
MAPPPASAEALVKRNARLREELRRQAREARLRQSVVRPTSAAFWSAEVRAIAAFKLPLMASFIVIVVVPSLIVAAYFIFF
ASSQYLSEARFAVRTSEHAGIENLSSDAAAQGLSEVQDSLIIANYVKSLAVVAALDERIGLRKLFSRPSIDWFSRFNPDR
PIERLERSWRSQIDTAIESPSGIITVKVWAFSPEDSLTIADAIVGLSEDMVNKLGERTRKDAIAQSQAELERAEARLRKA
RAAVRDLRNEVGVIDPARTNEGIAKLLGDLESDLVLIDQELGTARRTLSPDAPQFGLLEARRQAIRDNITALKARLTTAG
GPDKDTLSAIMTRYDTLDLERQIAERQYTAAATALEQARVAAERQGMYLATFVKPVRAQESDWPHRFWMPLAAALAFCLL
WLVIVSAFELMRHLKA
>Mature_415_residues
APPPASAEALVKRNARLREELRRQAREARLRQSVVRPTSAAFWSAEVRAIAAFKLPLMASFIVIVVVPSLIVAAYFIFFA
SSQYLSEARFAVRTSEHAGIENLSSDAAAQGLSEVQDSLIIANYVKSLAVVAALDERIGLRKLFSRPSIDWFSRFNPDRP
IERLERSWRSQIDTAIESPSGIITVKVWAFSPEDSLTIADAIVGLSEDMVNKLGERTRKDAIAQSQAELERAEARLRKAR
AAVRDLRNEVGVIDPARTNEGIAKLLGDLESDLVLIDQELGTARRTLSPDAPQFGLLEARRQAIRDNITALKARLTTAGG
PDKDTLSAIMTRYDTLDLERQIAERQYTAAATALEQARVAAERQGMYLATFVKPVRAQESDWPHRFWMPLAAALAFCLLW
LVIVSAFELMRHLKA

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrC and CtrD proteins [H]

COG id: COG3524

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexC/CtrB/KpsE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005705
- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 46237; Mature: 46105

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPPPASAEALVKRNARLREELRRQAREARLRQSVVRPTSAAFWSAEVRAIAAFKLPLMA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SFIVIVVVPSLIVAAYFIFFASSQYLSEARFAVRTSEHAGIENLSSDAAAQGLSEVQDSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHH
IIANYVKSLAVVAALDERIGLRKLFSRPSIDWFSRFNPDRPIERLERSWRSQIDTAIESP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
SGIITVKVWAFSPEDSLTIADAIVGLSEDMVNKLGERTRKDAIAQSQAELERAEARLRKA
CCEEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAVRDLRNEVGVIDPARTNEGIAKLLGDLESDLVLIDQELGTARRTLSPDAPQFGLLEA
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCHHHHHH
RRQAIRDNITALKARLTTAGGPDKDTLSAIMTRYDTLDLERQIAERQYTAAATALEQARV
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAERQGMYLATFVKPVRAQESDWPHRFWMPLAAALAFCLLWLVIVSAFELMRHLKA
HHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
APPPASAEALVKRNARLREELRRQAREARLRQSVVRPTSAAFWSAEVRAIAAFKLPLMA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
SFIVIVVVPSLIVAAYFIFFASSQYLSEARFAVRTSEHAGIENLSSDAAAQGLSEVQDSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHH
IIANYVKSLAVVAALDERIGLRKLFSRPSIDWFSRFNPDRPIERLERSWRSQIDTAIESP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
SGIITVKVWAFSPEDSLTIADAIVGLSEDMVNKLGERTRKDAIAQSQAELERAEARLRKA
CCEEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAVRDLRNEVGVIDPARTNEGIAKLLGDLESDLVLIDQELGTARRTLSPDAPQFGLLEA
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCHHHHHH
RRQAIRDNITALKARLTTAGGPDKDTLSAIMTRYDTLDLERQIAERQYTAAATALEQARV
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAERQGMYLATFVKPVRAQESDWPHRFWMPLAAALAFCLLWLVIVSAFELMRHLKA
HHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]