| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is yebE [C]
Identifier: 154247441
GI number: 154247441
Start: 3912483
End: 3913553
Strand: Reverse
Name: yebE [C]
Synonym: Xaut_3513
Alternate gene names: 154247441
Gene position: 3913553-3912483 (Counterclockwise)
Preceding gene: 154247442
Following gene: 154247440
Centisome position: 73.72
GC content: 75.16
Gene sequence:
>1071_bases ATGGCGGATGCAGGAAGTCTTCTGGGGCAGCTCATCGGGGCTGCGCTCGGCAACGGCAGCGTGCGCGGCGGCGGGGGAGC CGGCGGCGGCGGCCTCGACCAGATCCTCAAGAGCGTGCTCGAAGGCGCGGGACAGGGCGGGCGCGGCGCGCCCTCCGGCC AAAGCGGCGGCCTGCCCGGCGGGCTCGGCGACATTCTGGGCCAGGTGCTCGGTGGCGGGGCAGCCGCCGGTGGCCGTCCC CAGGGCGGGGCCTCCGGCCTGCCGGGCGGGCTCGGGGATATTCTCGGCCAGGTGCTGGGGGGCGGCGGACAGCGCCCCGG TGGTACGGGCGACAGCGGCGGAGCCCCGGCCGGGCTCCCCGGCGGGCTGGGCGACATCCTCGGCCAGATCCTCGGAGGCG GCAGCGCTCCGGCGGGCGGCGGCATATCGGGCGGCAGTACCGGCGGATCGCTCGGCGATCTCGCCGAGGCCTCCCTCGGC GGCCCGCCCACCACATCGGCTCCAAACCCGTATCCCGCGCCGGCACCCTCGCCGGCTCCCGCCCCTGCCCCGCAGTCGGG CGGCGGCAGCGGCGACCTGGTGAAGTATGGCGGCATGGCCGTCATCGGCATGCTGGCGTGGAATGCCTTCCGCAAGTGGC AGTCCCAGTCAGGCGGGCGGTCGGCCTTCACCTCCGGCTCGCCGGAGGCCGCCGGCTTCTCCCCGGCCGCAGCCCCCGGC GGGGCGGATGCCTTCTCCGGCGTGCTGCTCTCGGCCATGGCGGCGGCGGCACAGGCGGACGGGCAGATCGACCAGGAGGA GCTGGAGCGCATCACTGGCGGACTGTCCCGCTTCGGGGCGGCGGCACCGGAACGCGAGGCGCTCATCACCTTCCTCACCA CCCCGGTGGACCCGCAGCAGGTGGTGGATGCCGCCACCAGCCCTGAAGCGGCGTTGCAGATCTACGCCGCCTCGGCCATG GCGATCCGTCCCGACAGCGCGGCCGAGAAGCAGTATCTGGCCAGCCTCGCCTCGGCGCTCAACCTCGATCCGGGCCTCAA GGCCCAGCTGGACGCGGACCTGAACGCCTGA
Upstream 100 bases:
>100_bases TGGGACAACCTGATCGGGACAGCGGTCTCAATACTCAAAACAACGCACGTTCGGTCGCTTGCGGTGCAACCCGATTGGAA CGTCCTTCAGGGAGGGTCTC
Downstream 100 bases:
>100_bases GACGGGGCCATGCTCACGCCATCGTGCGCGGCGGGGCCGTAACGGCGCCCCGTCGCCCGGCGTAATGGGAAGCGGGGCGG CCGGCAGCGGCCGTTCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MADAGSLLGQLIGAALGNGSVRGGGGAGGGGLDQILKSVLEGAGQGGRGAPSGQSGGLPGGLGDILGQVLGGGAAAGGRP QGGASGLPGGLGDILGQVLGGGGQRPGGTGDSGGAPAGLPGGLGDILGQILGGGSAPAGGGISGGSTGGSLGDLAEASLG GPPTTSAPNPYPAPAPSPAPAPAPQSGGGSGDLVKYGGMAVIGMLAWNAFRKWQSQSGGRSAFTSGSPEAAGFSPAAAPG GADAFSGVLLSAMAAAAQADGQIDQEELERITGGLSRFGAAAPEREALITFLTTPVDPQQVVDAATSPEAALQIYAASAM AIRPDSAAEKQYLASLASALNLDPGLKAQLDADLNA
Sequences:
>Translated_356_residues MADAGSLLGQLIGAALGNGSVRGGGGAGGGGLDQILKSVLEGAGQGGRGAPSGQSGGLPGGLGDILGQVLGGGAAAGGRP QGGASGLPGGLGDILGQVLGGGGQRPGGTGDSGGAPAGLPGGLGDILGQILGGGSAPAGGGISGGSTGGSLGDLAEASLG GPPTTSAPNPYPAPAPSPAPAPAPQSGGGSGDLVKYGGMAVIGMLAWNAFRKWQSQSGGRSAFTSGSPEAAGFSPAAAPG GADAFSGVLLSAMAAAAQADGQIDQEELERITGGLSRFGAAAPEREALITFLTTPVDPQQVVDAATSPEAALQIYAASAM AIRPDSAAEKQYLASLASALNLDPGLKAQLDADLNA >Mature_355_residues ADAGSLLGQLIGAALGNGSVRGGGGAGGGGLDQILKSVLEGAGQGGRGAPSGQSGGLPGGLGDILGQVLGGGAAAGGRPQ GGASGLPGGLGDILGQVLGGGGQRPGGTGDSGGAPAGLPGGLGDILGQILGGGSAPAGGGISGGSTGGSLGDLAEASLGG PPTTSAPNPYPAPAPSPAPAPAPQSGGGSGDLVKYGGMAVIGMLAWNAFRKWQSQSGGRSAFTSGSPEAAGFSPAAAPGG ADAFSGVLLSAMAAAAQADGQIDQEELERITGGLSRFGAAAPEREALITFLTTPVDPQQVVDAATSPEAALQIYAASAMA IRPDSAAEKQYLASLASALNLDPGLKAQLDADLNA
Specific function: Unknown
COG id: COG2979
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33271; Mature: 33140
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAGSLLGQLIGAALGNGSVRGGGGAGGGGLDQILKSVLEGAGQGGRGAPSGQSGGLPG CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GLGDILGQVLGGGAAAGGRPQGGASGLPGGLGDILGQVLGGGGQRPGGTGDSGGAPAGLP CHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GGLGDILGQILGGGSAPAGGGISGGSTGGSLGDLAEASLGGPPTTSAPNPYPAPAPSPAP CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC APAPQSGGGSGDLVKYGGMAVIGMLAWNAFRKWQSQSGGRSAFTSGSPEAAGFSPAAAPG CCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GADAFSGVLLSAMAAAAQADGQIDQEELERITGGLSRFGAAAPEREALITFLTTPVDPQQ CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEHHHCCCCCHHH VVDAATSPEAALQIYAASAMAIRPDSAAEKQYLASLASALNLDPGLKAQLDADLNA HHHHCCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCC >Mature Secondary Structure ADAGSLLGQLIGAALGNGSVRGGGGAGGGGLDQILKSVLEGAGQGGRGAPSGQSGGLPG CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC GLGDILGQVLGGGAAAGGRPQGGASGLPGGLGDILGQVLGGGGQRPGGTGDSGGAPAGLP CHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GGLGDILGQILGGGSAPAGGGISGGSTGGSLGDLAEASLGGPPTTSAPNPYPAPAPSPAP CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC APAPQSGGGSGDLVKYGGMAVIGMLAWNAFRKWQSQSGGRSAFTSGSPEAAGFSPAAAPG CCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC GADAFSGVLLSAMAAAAQADGQIDQEELERITGGLSRFGAAAPEREALITFLTTPVDPQQ CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEHHHCCCCCHHH VVDAATSPEAALQIYAASAMAIRPDSAAEKQYLASLASALNLDPGLKAQLDADLNA HHHHCCCCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA