| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is acxB
Identifier: 154247438
GI number: 154247438
Start: 3908472
End: 3910802
Strand: Direct
Name: acxB
Synonym: Xaut_3510
Alternate gene names: 154247438
Gene position: 3908472-3910802 (Clockwise)
Preceding gene: 154247437
Following gene: 154247439
Centisome position: 73.62
GC content: 66.5
Gene sequence:
>2331_bases ATGAACGTGACTGTTGACCAGAGCACCCTTGCGGGTGCGACGCGCGGCATCGTGCGCGGCGGCGAGACGCTGAAGGAGCA TCGCGACCGCCTCATGGCCGCCACCAAGGCCACCGGCCGCTATGCCGGCCTGAAGACGCTGGAGCTGCGCGAGCGCGAGC CCATCCTCTACAACAAGCTGTTCTCGCGCCTGCGGGCCGGCGTGGTGGATGCCCGCGAGACCGCCAAGAAGATCGCCGCC TCCCCCATCGTGGAGCAGGAGGGCGAGCTGTGCTTCACCCTCTACAACGCGGCGGGCGACAGCCTTCTCACCTCCACCGG CATCATCATCCATGTGGGAACCATGGGTGCCGCGATCAAATACATGATCGAGAACAATTGGGAGGCCAATCCCGGCGTCC ACGACAAGGACATCTTCTGCAACAACGACAGCCTGATCGGAAACGTCCATCCGTGCGACATCCACACCATCGTGCCCATC TTCTGGGAAGGTGAGCTGATCGGCTGGGTGGGCGGCGTCACCCACGTCATCGACACCGGCGCGGTGGGGCCGGGCTCCAT GGCCACCGGGCAGGTGCAGCGCTTCGGCGACGGCTATTCCATCACCTGCCGCAAGGTGGGCGCCAACGACACCCTGTTCC GCGACTGGCTGCACGAAAGCCAGCGCATGGTGCGCACCACCCGCTACTGGATGCTGGACGAGCGCACCCGCATCGCCGGC TGCCACATGATCCGCAAGCTGGTGGAAGAGGTGGTCGCGGAAGAGGGCATCGAGGCCTACTGGAAGTTCGCCTACGAGGC GGTGGAGCACGGCCGGCTCGGGCTCCAGGCCCGCATCAAGGCCATGACCATCCCCGGCACCTACCGGCAGGTGGGCTTCG TGGATGTGCCCTACGCCCATGAGGACGTGCGGGTGCCCTCCGATTTCGCCAAGCTCGACACCATCATGCACGCCCCGTGC GAGATGACGATCCGCCGGGACGGCACCTGGCGCCTCGACTTCGAGGGATCGAGCCGCTGGGGCTGGCACACCTACAACGC CCACCAGGTGAGCTTCACCTCGGGCATCTGGGTGATGATGACCCAGACCCTCATCCCCTCCGAGATGATCAATGACGGCG CCGCCTACGGCACCGAGTTCCGGCTGCCCAAGGGCACCTGGATGAACCCGGACGACCGCCGCGTCGCCTTCTCCTACAGC TGGCACTTCCTGGTCTCGGCCTGGACGGCGCTGTGGCGGGGCCTGTCGCGCTCCTACTTCGGGCGCGGCTACCTGGAGGA GGTCAACGCCGGCAACGCCAACACCTCCAACTGGCTGCAGGGCGGCGGCTTCAACCAGTATGACGAGATCCACGCCGTGA ACTCGTTCGAGTGCGCCGCCAACGGCACCGGCGCCACCGCGGTGCAGGACGGCCTGTCCCACGCCGCCGCCATCTGGAAC CCGGAAGGCGACATGGGTGACATGGAGATCTGGGAACTGGCCGAGCCGCTGGTCTATCTCGGCCGGCAGATCAAGGCGTC GTCGGGCGGCTCCGGCAAGTATCGCGGCGGCTGCGGCTTCGAGAGCCTGCGCATGGTCTGGAACGCCAAGGACTGGACCA TGTTCTTCATGGGCAACGGCCACATCTCCTCCGACTGGGGGCTGATGGGCGGTTATCCGGCGGCCTCCGGCTATCGCTTC GCCGCCCACAAGACCAACCTGAAGGAACTGATCGCGTCCGGCGCGGAGATCCCGCTCGGCGGCGACACCGATCCGGAGAA CCCGACCTGGGACGCCATGCTGCCCGACGCCCAGATCAAGCGCGACAAGCAGGCCATCACCACCGAGGAGATGTTCTCCG ACTACGACCTCTACCTCAACTACATGCGCGGCGGCCCCGGCTTCGGTGATCCGCTCGACCGTGAGCCGCAGGCGGTGGCC GACGACATCAATGGCGGCTACGTGCTGGAGCGCTTCGCCGGCGAGGTCTATGGCGTCGTGGTGCGGAAGGGCGCGGACGG CCAGTATGGCGTGGACGAGGCCGGCACCGCCGCCGCCCGCGCGCAGATCCGCAAGGATCGCCTCGCCAAGTCAGTGCCGG TCTCCGAATGGATGAAGGGCGAGCGCGAGAAGATCCTCGCCAAGGATGCGGGCACGCAGGTGCGGCAGATGTTTGCCGCC TCCTTCAAGCTCGGCCCGCGCTTCGAGAAGGACTTCCGCACCTTCTGGAGCCTGCCCGACAGCTGGACCCTGCCGGAGGA AGAAATCGGCGTGCCCACCTACGGCTCGCGCTATTCCATGGACATCTCCGAACTGCCCGACGTGCACACCGTGCAGTTCG TGGAGGAATGA
Upstream 100 bases:
>100_bases GCTCCCAGCCGCGAGGCGTGGATGGCCGGGACAAGCCCGGCCATGACGACGCGAAGAAGCACGCTCAATCCGAGTCAACG AACTCAAAGGAAACGACCCC
Downstream 100 bases:
>100_bases TCCCTCCACTGGGCGGCGGCGACAGCCGTCGCTGCCGCCCATTTTTTCCTTGGAAAACAAACATCAAGTGGAGGAAACAC CATGGCCTATACCCGCTCGA
Product: hydantoinase B/oxoprolinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 776; Mature: 776
Protein sequence:
>776_residues MNVTVDQSTLAGATRGIVRGGETLKEHRDRLMAATKATGRYAGLKTLELREREPILYNKLFSRLRAGVVDARETAKKIAA SPIVEQEGELCFTLYNAAGDSLLTSTGIIIHVGTMGAAIKYMIENNWEANPGVHDKDIFCNNDSLIGNVHPCDIHTIVPI FWEGELIGWVGGVTHVIDTGAVGPGSMATGQVQRFGDGYSITCRKVGANDTLFRDWLHESQRMVRTTRYWMLDERTRIAG CHMIRKLVEEVVAEEGIEAYWKFAYEAVEHGRLGLQARIKAMTIPGTYRQVGFVDVPYAHEDVRVPSDFAKLDTIMHAPC EMTIRRDGTWRLDFEGSSRWGWHTYNAHQVSFTSGIWVMMTQTLIPSEMINDGAAYGTEFRLPKGTWMNPDDRRVAFSYS WHFLVSAWTALWRGLSRSYFGRGYLEEVNAGNANTSNWLQGGGFNQYDEIHAVNSFECAANGTGATAVQDGLSHAAAIWN PEGDMGDMEIWELAEPLVYLGRQIKASSGGSGKYRGGCGFESLRMVWNAKDWTMFFMGNGHISSDWGLMGGYPAASGYRF AAHKTNLKELIASGAEIPLGGDTDPENPTWDAMLPDAQIKRDKQAITTEEMFSDYDLYLNYMRGGPGFGDPLDREPQAVA DDINGGYVLERFAGEVYGVVVRKGADGQYGVDEAGTAAARAQIRKDRLAKSVPVSEWMKGEREKILAKDAGTQVRQMFAA SFKLGPRFEKDFRTFWSLPDSWTLPEEEIGVPTYGSRYSMDISELPDVHTVQFVEE
Sequences:
>Translated_776_residues MNVTVDQSTLAGATRGIVRGGETLKEHRDRLMAATKATGRYAGLKTLELREREPILYNKLFSRLRAGVVDARETAKKIAA SPIVEQEGELCFTLYNAAGDSLLTSTGIIIHVGTMGAAIKYMIENNWEANPGVHDKDIFCNNDSLIGNVHPCDIHTIVPI FWEGELIGWVGGVTHVIDTGAVGPGSMATGQVQRFGDGYSITCRKVGANDTLFRDWLHESQRMVRTTRYWMLDERTRIAG CHMIRKLVEEVVAEEGIEAYWKFAYEAVEHGRLGLQARIKAMTIPGTYRQVGFVDVPYAHEDVRVPSDFAKLDTIMHAPC EMTIRRDGTWRLDFEGSSRWGWHTYNAHQVSFTSGIWVMMTQTLIPSEMINDGAAYGTEFRLPKGTWMNPDDRRVAFSYS WHFLVSAWTALWRGLSRSYFGRGYLEEVNAGNANTSNWLQGGGFNQYDEIHAVNSFECAANGTGATAVQDGLSHAAAIWN PEGDMGDMEIWELAEPLVYLGRQIKASSGGSGKYRGGCGFESLRMVWNAKDWTMFFMGNGHISSDWGLMGGYPAASGYRF AAHKTNLKELIASGAEIPLGGDTDPENPTWDAMLPDAQIKRDKQAITTEEMFSDYDLYLNYMRGGPGFGDPLDREPQAVA DDINGGYVLERFAGEVYGVVVRKGADGQYGVDEAGTAAARAQIRKDRLAKSVPVSEWMKGEREKILAKDAGTQVRQMFAA SFKLGPRFEKDFRTFWSLPDSWTLPEEEIGVPTYGSRYSMDISELPDVHTVQFVEE >Mature_776_residues MNVTVDQSTLAGATRGIVRGGETLKEHRDRLMAATKATGRYAGLKTLELREREPILYNKLFSRLRAGVVDARETAKKIAA SPIVEQEGELCFTLYNAAGDSLLTSTGIIIHVGTMGAAIKYMIENNWEANPGVHDKDIFCNNDSLIGNVHPCDIHTIVPI FWEGELIGWVGGVTHVIDTGAVGPGSMATGQVQRFGDGYSITCRKVGANDTLFRDWLHESQRMVRTTRYWMLDERTRIAG CHMIRKLVEEVVAEEGIEAYWKFAYEAVEHGRLGLQARIKAMTIPGTYRQVGFVDVPYAHEDVRVPSDFAKLDTIMHAPC EMTIRRDGTWRLDFEGSSRWGWHTYNAHQVSFTSGIWVMMTQTLIPSEMINDGAAYGTEFRLPKGTWMNPDDRRVAFSYS WHFLVSAWTALWRGLSRSYFGRGYLEEVNAGNANTSNWLQGGGFNQYDEIHAVNSFECAANGTGATAVQDGLSHAAAIWN PEGDMGDMEIWELAEPLVYLGRQIKASSGGSGKYRGGCGFESLRMVWNAKDWTMFFMGNGHISSDWGLMGGYPAASGYRF AAHKTNLKELIASGAEIPLGGDTDPENPTWDAMLPDAQIKRDKQAITTEEMFSDYDLYLNYMRGGPGFGDPLDREPQAVA DDINGGYVLERFAGEVYGVVVRKGADGQYGVDEAGTAAARAQIRKDRLAKSVPVSEWMKGEREKILAKDAGTQVRQMFAA SFKLGPRFEKDFRTFWSLPDSWTLPEEEIGVPTYGSRYSMDISELPDVHTVQFVEE
Specific function: Catalyzes the carboxylation of acetone to form acetoacetate. Has a reduced activity on butanone, and no activity on 2-pentatone, 3-pentatone, 2-hexanone, chloroacetone, pyruvate, phosphoenolpyruvate, acetaldehyde, propionaldehyde and propylene oxide
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACXB_XANP2 (Q8RM03)
Other databases:
- EMBL: AF251789 - EMBL: AY055852 - EMBL: CP000781 - RefSeq: YP_001418396.1 - STRING: Q8RM03 - GeneID: 5424922 - GenomeReviews: CP000781_GR - KEGG: xau:Xaut_3510 - HOGENOM: HBG334625 - OMA: NPEGDMG - ProtClustDB: CLSK864234 - BioCyc: MetaCyc:MONOMER-13282 - BioCyc: XAUT78245:XAUT_3510-MONOMER - InterPro: IPR003692
Pfam domain/function: PF02538 Hydantoinase_B
EC number: =6.4.1.6
Molecular weight: Translated: 86343; Mature: 86343
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVTVDQSTLAGATRGIVRGGETLKEHRDRLMAATKATGRYAGLKTLELREREPILYNKL CCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHH FSRLRAGVVDARETAKKIAASPIVEQEGELCFTLYNAAGDSLLTSTGIIIHVGTMGAAIK HHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEECCCEEEEECCCCCEEE YMIENNWEANPGVHDKDIFCNNDSLIGNVHPCDIHTIVPIFWEGELIGWVGGVTHVIDTG EEECCCCCCCCCCCCCCEEECCCCEECCCCCCCCEEEEEEEECCEEEEHHCCHHHHHHCC AVGPGSMATGQVQRFGDGYSITCRKVGANDTLFRDWLHESQRMVRTTRYWMLDERTRIAG CCCCCCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHH CHMIRKLVEEVVAEEGIEAYWKFAYEAVEHGRLGLQARIKAMTIPGTYRQVGFVDVPYAH HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHCCCEEECCCCC EDVRVPSDFAKLDTIMHAPCEMTIRRDGTWRLDFEGSSRWGWHTYNAHQVSFTSGIWVMM CCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCEEECCCEEEEECCCEEEEH TQTLIPSEMINDGAAYGTEFRLPKGTWMNPDDRRVAFSYSWHFLVSAWTALWRGLSRSYF HHHHCCHHHHCCCCCCCCEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHC GRGYLEEVNAGNANTSNWLQGGGFNQYDEIHAVNSFECAANGTGATAVQDGLSHAAAIWN CCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCCCHHHHHHHHHHEEEEC PEGDMGDMEIWELAEPLVYLGRQIKASSGGSGKYRGGCGFESLRMVWNAKDWTMFFMGNG CCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHEECCCCEEEEEEECC HISSDWGLMGGYPAASGYRFAAHKTNLKELIASGAEIPLGGDTDPENPTWDAMLPDAQIK EECCCCCCCCCCCCCCCEEEEHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH RDKQAITTEEMFSDYDLYLNYMRGGPGFGDPLDREPQAVADDINGGYVLERFAGEVYGVV HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHCCEEEEE VRKGADGQYGVDEAGTAAARAQIRKDRLAKSVPVSEWMKGEREKILAKDAGTQVRQMFAA EEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCHHHHHHHHH SFKLGPRFEKDFRTFWSLPDSWTLPEEEIGVPTYGSRYSMDISELPDVHTVQFVEE HHCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEECCHHHCCCCEEEEEECC >Mature Secondary Structure MNVTVDQSTLAGATRGIVRGGETLKEHRDRLMAATKATGRYAGLKTLELREREPILYNKL CCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHH FSRLRAGVVDARETAKKIAASPIVEQEGELCFTLYNAAGDSLLTSTGIIIHVGTMGAAIK HHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEECCCEEEEECCCCCEEE YMIENNWEANPGVHDKDIFCNNDSLIGNVHPCDIHTIVPIFWEGELIGWVGGVTHVIDTG EEECCCCCCCCCCCCCCEEECCCCEECCCCCCCCEEEEEEEECCEEEEHHCCHHHHHHCC AVGPGSMATGQVQRFGDGYSITCRKVGANDTLFRDWLHESQRMVRTTRYWMLDERTRIAG CCCCCCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHH CHMIRKLVEEVVAEEGIEAYWKFAYEAVEHGRLGLQARIKAMTIPGTYRQVGFVDVPYAH HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHCCCEEECCCCC EDVRVPSDFAKLDTIMHAPCEMTIRRDGTWRLDFEGSSRWGWHTYNAHQVSFTSGIWVMM CCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCEEECCCEEEEECCCEEEEH TQTLIPSEMINDGAAYGTEFRLPKGTWMNPDDRRVAFSYSWHFLVSAWTALWRGLSRSYF HHHHCCHHHHCCCCCCCCEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHC GRGYLEEVNAGNANTSNWLQGGGFNQYDEIHAVNSFECAANGTGATAVQDGLSHAAAIWN CCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCCCHHHHHHHHHHEEEEC PEGDMGDMEIWELAEPLVYLGRQIKASSGGSGKYRGGCGFESLRMVWNAKDWTMFFMGNG CCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHEECCCCEEEEEEECC HISSDWGLMGGYPAASGYRFAAHKTNLKELIASGAEIPLGGDTDPENPTWDAMLPDAQIK EECCCCCCCCCCCCCCCEEEEHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH RDKQAITTEEMFSDYDLYLNYMRGGPGFGDPLDREPQAVADDINGGYVLERFAGEVYGVV HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHCCEEEEE VRKGADGQYGVDEAGTAAARAQIRKDRLAKSVPVSEWMKGEREKILAKDAGTQVRQMFAA EEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCCHHHHHHHHH SFKLGPRFEKDFRTFWSLPDSWTLPEEEIGVPTYGSRYSMDISELPDVHTVQFVEE HHCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEECCHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12003937