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The map label for this gene is arcB [H]

Identifier: 154247434

GI number: 154247434

Start: 3902200

End: 3903132

Strand: Direct

Name: arcB [H]

Synonym: Xaut_3506

Alternate gene names: 154247434

Gene position: 3902200-3903132 (Clockwise)

Preceding gene: 154247432

Following gene: 154247437

Centisome position: 73.5

GC content: 70.53

Gene sequence:

>933_bases
ATGGTTCGGGTGTTTGAAGCGGCGGAGGTGGAGGCCGCGCTGGGCTATGAGCGGCTGGTGCCGGCCCTTGGCGCCGCCTT
CGCCGATGCCAAGGTGGAAGCGCCGGTGCGCCAGTCCTATGAGGTGGGCCAGGCCGGCGCGCCCGCCCATCTCCTCGCCA
TGCCAGCCTGGCGGCGCGGTGCGGCGCTGGGGGTGAAAATCGTCAACATCTTCCCTGCCAACGCGGCGCGCAACATGGGC
TCGGTGCACGGGCTCTATGTGTTGTTCGATGGCTCAACCGGCGTGCCGAAGGCGATCCTCGACGCCGAGGCCCTCACCAA
CCGGCGCACCGCCGCCACCTCGGCGCTCGCCTCGTCTTTCCTGTCACGCATGAACAGCGAGACGCTGACCGTGGTGGGCA
CCGGCCACCTCGCCTTCCATCTGGCGCAGGGCCACTGCTTTGTGCGGCCTATCGGCCGCGTGCTGGTGTGGGGGCGGTCG
CTCGCGCGGGCGCAGGAGATGGCGGCGCGGCTGAAGGTGCTGGGTCTTCCCGCCGAGGCGGCGGAGGACCTGTCGGCGGC
GGTGCGCGCGGCGGACATCGTCACCTGCGCCACCACCTCGGTGGAGCCGCTGGTGCTGGGGCGGGACGTGAGGCCCGGCA
CCCATGTGGACCTGGTGGGCGCCTTCACCCCGGCCATGCGCGAGAGCGACGACGATTTGGTGGCGAAGAGCGCCGTCTAT
GTGGACACCTATGGAGGCGCGCTGGCGGAGGCCGGCGACCTGCTCCAGCCCGCAGCCTCCGGGCGCTGGTCGAAGGAACT
GGTGCGGGCGGACCTCCACGAATTGTGCGCCGGCCTGAAAGAGGGGCGCACGGAAAGCGAGAGCGTGACGCTTTTTAAGT
CCGTGGGAGCGGCGCTGGAGGATCTGGTGGCGGCGGAACTGGTGGCGCGCTGA

Upstream 100 bases:

>100_bases
GTAGATCCAAGTAGCGGTGACCCTGTTTGGTTCCCGCGCCGTTGCGGGCAAAGGCCCAGCGTGCTCTACGGTCTGGCCAA
GGCTAAGGCGGGAGGAAGCC

Downstream 100 bases:

>100_bases
GGCAGCGCCCGGCGCCCGCCCACCGAGGGAGGGCGCCGGATGCGGATCTCAGGCTTTCGCTTCCAGCGCGGCGTCGAGCG
CCTTGGTCAGGCGGGGGTCG

Product: ornithine cyclodeaminase/mu-crystallin

Products: NA

Alternate protein names: OCD [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MVRVFEAAEVEAALGYERLVPALGAAFADAKVEAPVRQSYEVGQAGAPAHLLAMPAWRRGAALGVKIVNIFPANAARNMG
SVHGLYVLFDGSTGVPKAILDAEALTNRRTAATSALASSFLSRMNSETLTVVGTGHLAFHLAQGHCFVRPIGRVLVWGRS
LARAQEMAARLKVLGLPAEAAEDLSAAVRAADIVTCATTSVEPLVLGRDVRPGTHVDLVGAFTPAMRESDDDLVAKSAVY
VDTYGGALAEAGDLLQPAASGRWSKELVRADLHELCAGLKEGRTESESVTLFKSVGAALEDLVAAELVAR

Sequences:

>Translated_310_residues
MVRVFEAAEVEAALGYERLVPALGAAFADAKVEAPVRQSYEVGQAGAPAHLLAMPAWRRGAALGVKIVNIFPANAARNMG
SVHGLYVLFDGSTGVPKAILDAEALTNRRTAATSALASSFLSRMNSETLTVVGTGHLAFHLAQGHCFVRPIGRVLVWGRS
LARAQEMAARLKVLGLPAEAAEDLSAAVRAADIVTCATTSVEPLVLGRDVRPGTHVDLVGAFTPAMRESDDDLVAKSAVY
VDTYGGALAEAGDLLQPAASGRWSKELVRADLHELCAGLKEGRTESESVTLFKSVGAALEDLVAAELVAR
>Mature_310_residues
MVRVFEAAEVEAALGYERLVPALGAAFADAKVEAPVRQSYEVGQAGAPAHLLAMPAWRRGAALGVKIVNIFPANAARNMG
SVHGLYVLFDGSTGVPKAILDAEALTNRRTAATSALASSFLSRMNSETLTVVGTGHLAFHLAQGHCFVRPIGRVLVWGRS
LARAQEMAARLKVLGLPAEAAEDLSAAVRAADIVTCATTSVEPLVLGRDVRPGTHVDLVGAFTPAMRESDDDLVAKSAVY
VDTYGGALAEAGDLLQPAASGRWSKELVRADLHELCAGLKEGRTESESVTLFKSVGAALEDLVAAELVAR

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=311, Percent_Identity=32.7974276527331, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI62241008, Length=261, Percent_Identity=32.9501915708812, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24642678, Length=307, Percent_Identity=25.7328990228013, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 32464; Mature: 32464

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRVFEAAEVEAALGYERLVPALGAAFADAKVEAPVRQSYEVGQAGAPAHLLAMPAWRRG
CEEEECHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHEEECCCCCCC
AALGVKIVNIFPANAARNMGSVHGLYVLFDGSTGVPKAILDAEALTNRRTAATSALASSF
CCCCEEEEEEECCHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
LSRMNSETLTVVGTGHLAFHLAQGHCFVRPIGRVLVWGRSLARAQEMAARLKVLGLPAEA
HHHCCCCEEEEEECCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AEDLSAAVRAADIVTCATTSVEPLVLGRDVRPGTHVDLVGAFTPAMRESDDDLVAKSAVY
HHHHHHHHHHHHHEEEECCCCCCEEECCCCCCCCCEEEHHHCCHHHCCCCCHHHHHHEEE
VDTYGGALAEAGDLLQPAASGRWSKELVRADLHELCAGLKEGRTESESVTLFKSVGAALE
EECCCCHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
DLVAAELVAR
HHHHHHHHCC
>Mature Secondary Structure
MVRVFEAAEVEAALGYERLVPALGAAFADAKVEAPVRQSYEVGQAGAPAHLLAMPAWRRG
CEEEECHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHEEECCCCCCC
AALGVKIVNIFPANAARNMGSVHGLYVLFDGSTGVPKAILDAEALTNRRTAATSALASSF
CCCCEEEEEEECCHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHH
LSRMNSETLTVVGTGHLAFHLAQGHCFVRPIGRVLVWGRSLARAQEMAARLKVLGLPAEA
HHHCCCCEEEEEECCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AEDLSAAVRAADIVTCATTSVEPLVLGRDVRPGTHVDLVGAFTPAMRESDDDLVAKSAVY
HHHHHHHHHHHHHEEEECCCCCCEEECCCCCCCCCEEEHHHCCHHHCCCCCHHHHHHEEE
VDTYGGALAEAGDLLQPAASGRWSKELVRADLHELCAGLKEGRTESESVTLFKSVGAALE
EECCCCHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
DLVAAELVAR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3281832; 8045881; 11743193; 11743194 [H]