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The map label for this gene is speB [H]

Identifier: 154247420

GI number: 154247420

Start: 3888823

End: 3889815

Strand: Direct

Name: speB [H]

Synonym: Xaut_3492

Alternate gene names: 154247420

Gene position: 3888823-3889815 (Clockwise)

Preceding gene: 154247419

Following gene: 154247421

Centisome position: 73.25

GC content: 68.78

Gene sequence:

>993_bases
ATGTCGAGCACCAAGACCGATCCGCTGCATCCCCGCCCGGTGGATCGCGCCCTTGATCCCGGCTTTCGCCACGGTCAGTC
CACCGAGCCCAATTATTCCGGCGTCACATCCTTCCTGCGCCGGCGCTATGCCCGCGACGGTGGCGGAGCGGAGGTGGTGG
TGTGGGGCGTGCCGCTGGATGTAGCCGTCTCCAACCGGCCCGGCACGCGATTCGGACCGCGTGCCATCCGCGCTGCCTCC
ACCATCCTCGACGGCGACCCGTTCTATCCGTTCGGCATCGACCCGTTCGAGACGCTGGATGTGGTCGATGGCGGTGACTG
CGTGTTCGACTACGGCCTGCCCGCCGGGATCCCCGCTGCCATAGCCGCGCAGGCGCGCGCCCACTATGCCCGCGGCGCCC
ATCTGATGACCCTCGGCGGCGACCATTTCCTCACCTATCCGGTGCTTAAGGCGCTCACCACTCATCTCGGCGAGCCGGTG
GCGCTGGTGCAGTTCGATGCGCACCAGGATACCTGGGAAGACGGTGGCGACCGGGTGGACCACGGCACCATGATCACCCG
AGCCGTGAAGGACGGGCTGATCCGGGTGGATCGCTCGATCCAGGTGGGCATCCGCACCTATGCGCCCCAGACCTGCGGCA
TCGAGATCGTCCATGGGCTGACCGCCGCCGAGATGGGGCCGATCGCGCTGGCAGACCACATCGCCGACCGGGTGGGGGAT
GCCCCGGTCTATGTCACGTTCGACATCGATGCGCTGGACCCCGCCTTCGCCCCGGGCACTGGTACGCCGGTATGTGGCGG
CCTCTCCACCCGCGAGGCCATCTCCTGCCTGCGCAGGCTCGGCGGCCTCGACCTGAAGGGCTTCGACGTGGTGGAGGTGT
CCCCGCCCTATGATCACGCGGAGATCACCGCGCTCGCCGGGGCGACGCTGGCCTCGGTCTACCTGTGTCTCCTCGCCGAG
CGCAAGGCGACCGGACGGCCGGTCGCGCTCTGA

Upstream 100 bases:

>100_bases
GGATCAGATCGGATTGTATCAATCCGATCTGTGAAAATGCCTATGATGCCGGCGCTGCGGCGCCGGGCGCTTTCGGCCCG
CCGTCCATTCGAGGAGTGTC

Downstream 100 bases:

>100_bases
GGGGCGCGGCGGGGCCGGGGTGACCCTTGCGACGCCAGGGCGGATGTGGGACAGCGGAAGGCGAACCCAGCGGCGAGGAG
CACAGCGTGAAGGCAAGCGG

Product: putative agmatinase

Products: NA

Alternate protein names: Agmatine ureohydrolase; AUH [H]

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MSSTKTDPLHPRPVDRALDPGFRHGQSTEPNYSGVTSFLRRRYARDGGGAEVVVWGVPLDVAVSNRPGTRFGPRAIRAAS
TILDGDPFYPFGIDPFETLDVVDGGDCVFDYGLPAGIPAAIAAQARAHYARGAHLMTLGGDHFLTYPVLKALTTHLGEPV
ALVQFDAHQDTWEDGGDRVDHGTMITRAVKDGLIRVDRSIQVGIRTYAPQTCGIEIVHGLTAAEMGPIALADHIADRVGD
APVYVTFDIDALDPAFAPGTGTPVCGGLSTREAISCLRRLGGLDLKGFDVVEVSPPYDHAEITALAGATLASVYLCLLAE
RKATGRPVAL

Sequences:

>Translated_330_residues
MSSTKTDPLHPRPVDRALDPGFRHGQSTEPNYSGVTSFLRRRYARDGGGAEVVVWGVPLDVAVSNRPGTRFGPRAIRAAS
TILDGDPFYPFGIDPFETLDVVDGGDCVFDYGLPAGIPAAIAAQARAHYARGAHLMTLGGDHFLTYPVLKALTTHLGEPV
ALVQFDAHQDTWEDGGDRVDHGTMITRAVKDGLIRVDRSIQVGIRTYAPQTCGIEIVHGLTAAEMGPIALADHIADRVGD
APVYVTFDIDALDPAFAPGTGTPVCGGLSTREAISCLRRLGGLDLKGFDVVEVSPPYDHAEITALAGATLASVYLCLLAE
RKATGRPVAL
>Mature_329_residues
SSTKTDPLHPRPVDRALDPGFRHGQSTEPNYSGVTSFLRRRYARDGGGAEVVVWGVPLDVAVSNRPGTRFGPRAIRAAST
ILDGDPFYPFGIDPFETLDVVDGGDCVFDYGLPAGIPAAIAAQARAHYARGAHLMTLGGDHFLTYPVLKALTTHLGEPVA
LVQFDAHQDTWEDGGDRVDHGTMITRAVKDGLIRVDRSIQVGIRTYAPQTCGIEIVHGLTAAEMGPIALADHIADRVGDA
PVYVTFDIDALDPAFAPGTGTPVCGGLSTREAISCLRRLGGLDLKGFDVVEVSPPYDHAEITALAGATLASVYLCLLAER
KATGRPVAL

Specific function: Catalyzes the formation of putrescine from agmatine [H]

COG id: COG0010

COG function: function code E; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arginase family. Agmatinase subfamily [H]

Homologues:

Organism=Homo sapiens, GI37537722, Length=297, Percent_Identity=39.7306397306397, Blast_Score=181, Evalue=1e-45,
Organism=Escherichia coli, GI1789306, Length=274, Percent_Identity=45.985401459854, Blast_Score=206, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005925
- InterPro:   IPR006035
- InterPro:   IPR020855 [H]

Pfam domain/function: PF00491 Arginase [H]

EC number: =3.5.3.11 [H]

Molecular weight: Translated: 35035; Mature: 34904

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS00147 ARGINASE_1 ; PS00148 ARGINASE_2 ; PS01053 ARGINASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTKTDPLHPRPVDRALDPGFRHGQSTEPNYSGVTSFLRRRYARDGGGAEVVVWGVPLD
CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCEE
VAVSNRPGTRFGPRAIRAASTILDGDPFYPFGIDPFETLDVVDGGDCVFDYGLPAGIPAA
EEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCCCEEEECCCCCCCHHH
IAAQARAHYARGAHLMTLGGDHFLTYPVLKALTTHLGEPVALVQFDAHQDTWEDGGDRVD
HHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCCCC
HGTMITRAVKDGLIRVDRSIQVGIRTYAPQTCGIEIVHGLTAAEMGPIALADHIADRVGD
CHHHHHHHHHHCCEEECCCEEEEEEECCCCCCCCHHHHCCHHHHCCCHHHHHHHHHHHCC
APVYVTFDIDALDPAFAPGTGTPVCGGLSTREAISCLRRLGGLDLKGFDVVEVSPPYDHA
CCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCH
EITALAGATLASVYLCLLAERKATGRPVAL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SSTKTDPLHPRPVDRALDPGFRHGQSTEPNYSGVTSFLRRRYARDGGGAEVVVWGVPLD
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCEE
VAVSNRPGTRFGPRAIRAASTILDGDPFYPFGIDPFETLDVVDGGDCVFDYGLPAGIPAA
EEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCCCEEEECCCCCCCHHH
IAAQARAHYARGAHLMTLGGDHFLTYPVLKALTTHLGEPVALVQFDAHQDTWEDGGDRVD
HHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCCCC
HGTMITRAVKDGLIRVDRSIQVGIRTYAPQTCGIEIVHGLTAAEMGPIALADHIADRVGD
CHHHHHHHHHHCCEEECCCEEEEEEECCCCCCCCHHHHCCHHHHCCCHHHHHHHHHHHCC
APVYVTFDIDALDPAFAPGTGTPVCGGLSTREAISCLRRLGGLDLKGFDVVEVSPPYDHA
CCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCH
EITALAGATLASVYLCLLAERKATGRPVAL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]