| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is catD [H]
Identifier: 154247403
GI number: 154247403
Start: 3869140
End: 3869916
Strand: Direct
Name: catD [H]
Synonym: Xaut_3475
Alternate gene names: 154247403
Gene position: 3869140-3869916 (Clockwise)
Preceding gene: 154247402
Following gene: 154247404
Centisome position: 72.88
GC content: 71.81
Gene sequence:
>777_bases GTGCCGCTCATCGATCTGTCCGGGGAGCGTTTCCAGGTGGAGGTTTCGGGGCCGGAGGGGGCGCCGCCCCTTGTGCTGTC CCATTCGCTTGGCTGCACGCTGAACATGTGGGACGAGGTGGCGCCGCTGTTCGCCCGTACCCGCCGGGTCATCCGCTATG ACGCCCGCGGCCATGGGGCGAGCGCCGCGCCCGACCAGGTCTATGCCATGGGCGACCTGGGCCGCGACGTGCTGGCCATC CTCGACCGGCTGGGCCTCGCGCAGGCTGATTTCTGCGGCCTGTCGCTGGGCGGCATGGTGGGGCAGTGGCTGGCGCTGAA CGCGCCCCAGCGCCTGACGCGGCTGGTTCTGTCCAACACTACCGCCCATGCCGGCCCGCCCCGCTTCTGGGACCAGCGCA TCAAGGCGGTGCGCCGCGACGGCGTGGAGCCCATCGCCGATTCCGTCATCGACAGCTGGTTCACGCCGGAGTTCCGCGCC ACGGCGCCGGTGCGGGTGGCCTCGGTGCGGGCCATGGTGACGGGCACCAGCCCCGCCGGCTACATGGGCACCAGCGCCGC CATGCGCGACATGGATTTCCGGCACGACCTCAAGGCCGTCCGCACCCAGACGCTGGTGATTGTCTCGGACGGCGACCGCT CCACGCCGCCGGCCTGGGGCGAGGCCATCGCCGCCGCCATTCCCGGCGCAAAACTGGCGCGGCTGCCGGGCGGCCACCTC TCGGCCATTGAGCAGCCCGAGGCGTTCGTGCGCACGGTGGACGGCTTCCTGAACTGA
Upstream 100 bases:
>100_bases CATCCGGCCCATCGGCGCCTCCGCTTTCGACGCCCCCCTTGCACCGCCCCCCAAACGCGCTAAACCTTCTCTGGCATATT GAATCCAGAAGAGGTGCGCG
Downstream 100 bases:
>100_bases CATCCGGCCGACATCCCGGCCGGTGACATTCGTGCGCGCCTATGGAACATGCGCAGCGGATGGACCGGGAGGACAGGATG GCGACGCCGGAGACCGGGAC
Product: 3-oxoadipate enol-lactonase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MPLIDLSGERFQVEVSGPEGAPPLVLSHSLGCTLNMWDEVAPLFARTRRVIRYDARGHGASAAPDQVYAMGDLGRDVLAI LDRLGLAQADFCGLSLGGMVGQWLALNAPQRLTRLVLSNTTAHAGPPRFWDQRIKAVRRDGVEPIADSVIDSWFTPEFRA TAPVRVASVRAMVTGTSPAGYMGTSAAMRDMDFRHDLKAVRTQTLVIVSDGDRSTPPAWGEAIAAAIPGAKLARLPGGHL SAIEQPEAFVRTVDGFLN
Sequences:
>Translated_258_residues MPLIDLSGERFQVEVSGPEGAPPLVLSHSLGCTLNMWDEVAPLFARTRRVIRYDARGHGASAAPDQVYAMGDLGRDVLAI LDRLGLAQADFCGLSLGGMVGQWLALNAPQRLTRLVLSNTTAHAGPPRFWDQRIKAVRRDGVEPIADSVIDSWFTPEFRA TAPVRVASVRAMVTGTSPAGYMGTSAAMRDMDFRHDLKAVRTQTLVIVSDGDRSTPPAWGEAIAAAIPGAKLARLPGGHL SAIEQPEAFVRTVDGFLN >Mature_257_residues PLIDLSGERFQVEVSGPEGAPPLVLSHSLGCTLNMWDEVAPLFARTRRVIRYDARGHGASAAPDQVYAMGDLGRDVLAIL DRLGLAQADFCGLSLGGMVGQWLALNAPQRLTRLVLSNTTAHAGPPRFWDQRIKAVRRDGVEPIADSVIDSWFTPEFRAT APVRVASVRAMVTGTSPAGYMGTSAAMRDMDFRHDLKAVRTQTLVIVSDGDRSTPPAWGEAIAAAIPGAKLARLPGGHLS AIEQPEAFVRTVDGFLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 27695; Mature: 27564
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIDLSGERFQVEVSGPEGAPPLVLSHSLGCTLNMWDEVAPLFARTRRVIRYDARGHGA CCCCCCCCCEEEEEECCCCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHEEECCCCCCC SAAPDQVYAMGDLGRDVLAILDRLGLAQADFCGLSLGGMVGQWLALNAPQRLTRLVLSNT CCCCCCEEEHHHCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCC TAHAGPPRFWDQRIKAVRRDGVEPIADSVIDSWFTPEFRATAPVRVASVRAMVTGTSPAG CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEHEEEEEEECCCCCC YMGTSAAMRDMDFRHDLKAVRTQTLVIVSDGDRSTPPAWGEAIAAAIPGAKLARLPGGHL CCCCHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHCCCCCH SAIEQPEAFVRTVDGFLN HHHCCHHHHHHHHHHHCC >Mature Secondary Structure PLIDLSGERFQVEVSGPEGAPPLVLSHSLGCTLNMWDEVAPLFARTRRVIRYDARGHGA CCCCCCCCEEEEEECCCCCCCCEEEECCCCCEEECHHHHHHHHHHHHHHEEECCCCCCC SAAPDQVYAMGDLGRDVLAILDRLGLAQADFCGLSLGGMVGQWLALNAPQRLTRLVLSNT CCCCCCEEEHHHCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCC TAHAGPPRFWDQRIKAVRRDGVEPIADSVIDSWFTPEFRATAPVRVASVRAMVTGTSPAG CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEEHEEEEEEECCCCCC YMGTSAAMRDMDFRHDLKAVRTQTLVIVSDGDRSTPPAWGEAIAAAIPGAKLARLPGGHL CCCCHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHCCCCCH SAIEQPEAFVRTVDGFLN HHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]