| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247347
Identifier: 154247347
GI number: 154247347
Start: 3809678
End: 3810742
Strand: Direct
Name: 154247347
Synonym: Xaut_3419
Alternate gene names: NA
Gene position: 3809678-3810742 (Clockwise)
Preceding gene: 154247346
Following gene: 154247348
Centisome position: 71.76
GC content: 66.76
Gene sequence:
>1065_bases ATGAGCGCCGACCTGTCATTGACCGGGCGCAAGCCGCCCCGGGAGGCATCTCCCCTCGTCTGGGCGGCGGCAACGGTCGC GGCTATCGCCCTCTGGTTCGTGGTCTACGCCCAGCTCGCGCCGTTCTCCCAATGGTTGGTGGCCCGCCTGCCGGTGGAGC CGGGCAGCCATCTTGCCGAAGCGGTGGCATTCTTCGTCTACGACACGCCCAAGGTGCTGATGCTGCTGACCCTGGTGGTG TTCGCCATGGGCGTGGTGCGCAGCTTCTTCTCGGCCGAGCGCACCCGTGCGCTGCTCGCCGGAAAGCGCGAGGGGCTCGG CAATATCGCGGCCGCTGGCCTCGGCATCGTCACGCCTTTCTGCTCCTGCTCGGCGGTGCCGCTGTTCGTCGGCTTTGTCT CCGCCGGCGTGCCCCTCGGCGTTACGTTTTCCTTCCTCATCGCCGCGCCCATGGTCAATGAGGTGGCGCTGGGTCTGCTG TTCGCGCTCGTGGGCTGGAAGGTGGCGCTCACCTATCTGGCCTTCGGCCTCGCTGTGGCCATCGTCGCCGGCTGGGTCAT TGGCCGGCTGCACCTGGAAGGCTGGCTGGAAGACTGGGTGCGCAATGTGCGCGCCGCTCCGGTCGAGCTGCCGCCAAACG GCATGACGCTGGTGGATCGCATCAGGGCGGGCCTCGACGCGGTGCGCGACATCGTCGGCAAGGTCTGGATGTGGATCATC GCCGGCATCGCCGCGGGCGCCTTCATCCACGGCTTCGTGCCGGCGGATCTGCTCGCCTCCATCATGGGGCGGGATGCGTG GTGGTCGGTTCCGGCGGCGGTCCTGTTGGGCATTCCCATGTATTCCAATGCCGCAGGCATCATCCCGGTGGTGGAAGCTC TGCTGGCCAAGGGCGCTGCGCTGGGCACCGTGCTCGCCTTCATGATGGCAGTCATCGCCCTGTCGCTGCCGGAAATGATC ATCCTGCGCAAAGTGTTGAGCCTGAAGCTGATCGCCGTGTTCATCGGTGTGGTTGGCGCCGGCATCCTCGCCGTGGGCTT CCTGTTCAACGCGCTGTTTTCCTGA
Upstream 100 bases:
>100_bases GGGTGCGGTACCGTCGTAATCCCGAATTGCCGGCCGAGCAGGCGGCGATCATCAATGCAGTCCTCATCAGTCTCGACGCG ACATCGAACAGGAGAGCCGC
Downstream 100 bases:
>100_bases AACAAAAAGGCACAAGCCATGAAGGACGTGAAGGTGCTCGGCCCCGGCTGCTCCCGCTGCGAGGCCACGGCGCAGATGGT GCGGGATGAGGCGGCCAAGC
Product: permease
Products: NA
Alternate protein names: Permease Family Protein; Permease-Like Protein; Permease Superfamily; Integral Membrane Protein
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSADLSLTGRKPPREASPLVWAAATVAAIALWFVVYAQLAPFSQWLVARLPVEPGSHLAEAVAFFVYDTPKVLMLLTLVV FAMGVVRSFFSAERTRALLAGKREGLGNIAAAGLGIVTPFCSCSAVPLFVGFVSAGVPLGVTFSFLIAAPMVNEVALGLL FALVGWKVALTYLAFGLAVAIVAGWVIGRLHLEGWLEDWVRNVRAAPVELPPNGMTLVDRIRAGLDAVRDIVGKVWMWII AGIAAGAFIHGFVPADLLASIMGRDAWWSVPAAVLLGIPMYSNAAGIIPVVEALLAKGAALGTVLAFMMAVIALSLPEMI ILRKVLSLKLIAVFIGVVGAGILAVGFLFNALFS
Sequences:
>Translated_354_residues MSADLSLTGRKPPREASPLVWAAATVAAIALWFVVYAQLAPFSQWLVARLPVEPGSHLAEAVAFFVYDTPKVLMLLTLVV FAMGVVRSFFSAERTRALLAGKREGLGNIAAAGLGIVTPFCSCSAVPLFVGFVSAGVPLGVTFSFLIAAPMVNEVALGLL FALVGWKVALTYLAFGLAVAIVAGWVIGRLHLEGWLEDWVRNVRAAPVELPPNGMTLVDRIRAGLDAVRDIVGKVWMWII AGIAAGAFIHGFVPADLLASIMGRDAWWSVPAAVLLGIPMYSNAAGIIPVVEALLAKGAALGTVLAFMMAVIALSLPEMI ILRKVLSLKLIAVFIGVVGAGILAVGFLFNALFS >Mature_353_residues SADLSLTGRKPPREASPLVWAAATVAAIALWFVVYAQLAPFSQWLVARLPVEPGSHLAEAVAFFVYDTPKVLMLLTLVVF AMGVVRSFFSAERTRALLAGKREGLGNIAAAGLGIVTPFCSCSAVPLFVGFVSAGVPLGVTFSFLIAAPMVNEVALGLLF ALVGWKVALTYLAFGLAVAIVAGWVIGRLHLEGWLEDWVRNVRAAPVELPPNGMTLVDRIRAGLDAVRDIVGKVWMWIIA GIAAGAFIHGFVPADLLASIMGRDAWWSVPAAVLLGIPMYSNAAGIIPVVEALLAKGAALGTVLAFMMAVIALSLPEMII LRKVLSLKLIAVFIGVVGAGILAVGFLFNALFS
Specific function: Unknown
COG id: COG0701
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37301; Mature: 37170
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADLSLTGRKPPREASPLVWAAATVAAIALWFVVYAQLAPFSQWLVARLPVEPGSHLAE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AVAFFVYDTPKVLMLLTLVVFAMGVVRSFFSAERTRALLAGKREGLGNIAAAGLGIVTPF HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH CSCSAVPLFVGFVSAGVPLGVTFSFLIAAPMVNEVALGLLFALVGWKVALTYLAFGLAVA HCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVAGWVIGRLHLEGWLEDWVRNVRAAPVELPPNGMTLVDRIRAGLDAVRDIVGKVWMWII HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGIAAGAFIHGFVPADLLASIMGRDAWWSVPAAVLLGIPMYSNAAGIIPVVEALLAKGAA HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHH LGTVLAFMMAVIALSLPEMIILRKVLSLKLIAVFIGVVGAGILAVGFLFNALFS HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SADLSLTGRKPPREASPLVWAAATVAAIALWFVVYAQLAPFSQWLVARLPVEPGSHLAE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AVAFFVYDTPKVLMLLTLVVFAMGVVRSFFSAERTRALLAGKREGLGNIAAAGLGIVTPF HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH CSCSAVPLFVGFVSAGVPLGVTFSFLIAAPMVNEVALGLLFALVGWKVALTYLAFGLAVA HCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVAGWVIGRLHLEGWLEDWVRNVRAAPVELPPNGMTLVDRIRAGLDAVRDIVGKVWMWII HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGIAAGAFIHGFVPADLLASIMGRDAWWSVPAAVLLGIPMYSNAAGIIPVVEALLAKGAA HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHH LGTVLAFMMAVIALSLPEMIILRKVLSLKLIAVFIGVVGAGILAVGFLFNALFS HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA