Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is yjgR [H]

Identifier: 154247241

GI number: 154247241

Start: 3683835

End: 3685532

Strand: Direct

Name: yjgR [H]

Synonym: Xaut_3313

Alternate gene names: 154247241

Gene position: 3683835-3685532 (Clockwise)

Preceding gene: 154247238

Following gene: 154247242

Centisome position: 69.39

GC content: 69.08

Gene sequence:

>1698_bases
ATGGCACGCACCCCTTCCACCCGTCCGCCCGCCACCGGCCCGAGAACGGGCAAGGCGCCGGTGGCCGACGCCGCGCCTCC
CGCATCCGTGGGACCGACCGAGCCGAAGGCCAATCCCTGGGGGCCGGCGGCGCAGGAGGAGGGCGACGGCCGCATCCTGG
TGGGGCGCAGCTTCCTTGGCCGCAGCGAAGCGGCGAAAGCAGGCACCAGCGCCAAGGATGAATATCTCACCCTGCGCCTC
GCCAACCGCCACGGCCTGGTGACCGGCGCCACGGGCACCGGCAAGACCGTGACGCTGCAGGTTCTGGCCGAAGGGTTTTC
GCGGGCCGGGGTGCCAGTGTTCGCCGCCGACATCAAGGGCGACCTCTCCGGCGTGGCCGCCCTTGGCGAGGCCAAGGACT
TCCTGGTCGAGCGGGCGCAGCAGGTGGGCATCACCTACACCCCGGACAGCTTCCCGGTGATCTTCTGGGACCTGTTCGGC
GAGCAGGGCCACCCCATCCGCGCCACCGTGTCGGAGATGGGGCCGCTGCTGCTGGCGCGCCTCATGGGCCTCAACGACAC
CCAGGAGGGCGTGCTCAACATCGTGTTCCGCCTCGCCGACGAGCAGGGCCTGCCGATCCTGGATCTCAAGGACCTCAGGG
CCATGCTGGCCGAGGTCGCCCAGACCGCCTCCACCCTCACCACCAAGTACGGCAACGTCTCGGCGCAGAGCGTCGGGGCC
ATCCAGCGCCAGCTTCTGGTGCTGGAGAACCAGGGGGCGGACAAGTTCTTCGGCGAGCCGGCGCTGAACATCGCCGACCT
GATGCGGGTGGATCGCTCGGGCTATGGCACCATCTCGGTGCTGGCCGCGGACAAGCTGATGGGCGCACCGCGGCTTTATG
CCTGCTTCCTGCTGTGGCTTCTGTCGGAACTCTTCGAGCGCCTGCCAGAGGTGGGCGATCCGGACAAACCGAAGCTCGTC
TTCTTCTTCGACGAGGCGCATCTGTTGTTCGATGAGGCGCCCAAGGCGCTGCTGGACAAGGTGGAGCAGGTGGTTCGCCT
CATTCGCTCCAAGGGGGTGGGTGTCTATTTCGTCTCCCAGAACCCGCTGGACATTCCCGAAAGCGTGCTCGCCCAGCTCG
GCAACCGGGTGCAGCACGCCCTGCGCGCCTTCACTCCGCGTGACCAGAAGGCGGTGAAGGCTGCGGCCGAGACCTTCCGG
CCCAATCCCGATCTCGACACCGCTCAGGTCATCATGGAACTGGGCAAGGGCGAGGCACTGGTCTCCATGCTGGAGGGCAA
TGGCGTGCCCTCTATGGTGGAGCGCACGCTCATCCGCCCGCCCTGCGGCCGAATCGGCCCGTTGAGCGCCGACGAGCGCG
CGGCGGTGATGGCCAGGAGCCCGGTGGGGCACATCTATGACACGCCCATCGATCGCGAATCGGCGTTCGAGATGCTGCAG
AAGCGAATCGAGGAGAAGGCCGCCCCGCAGGAGGCGGCGGCCTCCGACGGCGGCGGATTTCTTGGCGGGGTGCTCGACAG
CGTGCTGGGCACCGGCCAGGCCGCCGGCAGGACGCCATCCGGGACGGCGCGGAGCGGCGGCCGGCCCAGCACCCGCATGA
CCACCACCGAGGTGGTGGTGAACCAGGTGGCGCGAACCGTGGCCACGGGTCTCGGCCGGGCCATCCTGCGCGGCATCCTC
GGCTCCATCCGACGCTGA

Upstream 100 bases:

>100_bases
GCAGGGGCGGGCGAAAACTTCGGATTGAAGAGACCGGATGCATCCGGCGATTCGTCGCTGTTGCATGCGTCGATGCGAGG
ATCGCGCCGAGGAGCACGCA

Downstream 100 bases:

>100_bases
CGTTCACCTAAAGGGGAACGAACGACAGTTTGTACTGATCTTGGAGCCCGAAAACGTATTCTGTTGCGTTGGCGCGGGCG
GGGCGGTATAATTGCGGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 564

Protein sequence:

>565_residues
MARTPSTRPPATGPRTGKAPVADAAPPASVGPTEPKANPWGPAAQEEGDGRILVGRSFLGRSEAAKAGTSAKDEYLTLRL
ANRHGLVTGATGTGKTVTLQVLAEGFSRAGVPVFAADIKGDLSGVAALGEAKDFLVERAQQVGITYTPDSFPVIFWDLFG
EQGHPIRATVSEMGPLLLARLMGLNDTQEGVLNIVFRLADEQGLPILDLKDLRAMLAEVAQTASTLTTKYGNVSAQSVGA
IQRQLLVLENQGADKFFGEPALNIADLMRVDRSGYGTISVLAADKLMGAPRLYACFLLWLLSELFERLPEVGDPDKPKLV
FFFDEAHLLFDEAPKALLDKVEQVVRLIRSKGVGVYFVSQNPLDIPESVLAQLGNRVQHALRAFTPRDQKAVKAAAETFR
PNPDLDTAQVIMELGKGEALVSMLEGNGVPSMVERTLIRPPCGRIGPLSADERAAVMARSPVGHIYDTPIDRESAFEMLQ
KRIEEKAAPQEAAASDGGGFLGGVLDSVLGTGQAAGRTPSGTARSGGRPSTRMTTTEVVVNQVARTVATGLGRAILRGIL
GSIRR

Sequences:

>Translated_565_residues
MARTPSTRPPATGPRTGKAPVADAAPPASVGPTEPKANPWGPAAQEEGDGRILVGRSFLGRSEAAKAGTSAKDEYLTLRL
ANRHGLVTGATGTGKTVTLQVLAEGFSRAGVPVFAADIKGDLSGVAALGEAKDFLVERAQQVGITYTPDSFPVIFWDLFG
EQGHPIRATVSEMGPLLLARLMGLNDTQEGVLNIVFRLADEQGLPILDLKDLRAMLAEVAQTASTLTTKYGNVSAQSVGA
IQRQLLVLENQGADKFFGEPALNIADLMRVDRSGYGTISVLAADKLMGAPRLYACFLLWLLSELFERLPEVGDPDKPKLV
FFFDEAHLLFDEAPKALLDKVEQVVRLIRSKGVGVYFVSQNPLDIPESVLAQLGNRVQHALRAFTPRDQKAVKAAAETFR
PNPDLDTAQVIMELGKGEALVSMLEGNGVPSMVERTLIRPPCGRIGPLSADERAAVMARSPVGHIYDTPIDRESAFEMLQ
KRIEEKAAPQEAAASDGGGFLGGVLDSVLGTGQAAGRTPSGTARSGGRPSTRMTTTEVVVNQVARTVATGLGRAILRGIL
GSIRR
>Mature_564_residues
ARTPSTRPPATGPRTGKAPVADAAPPASVGPTEPKANPWGPAAQEEGDGRILVGRSFLGRSEAAKAGTSAKDEYLTLRLA
NRHGLVTGATGTGKTVTLQVLAEGFSRAGVPVFAADIKGDLSGVAALGEAKDFLVERAQQVGITYTPDSFPVIFWDLFGE
QGHPIRATVSEMGPLLLARLMGLNDTQEGVLNIVFRLADEQGLPILDLKDLRAMLAEVAQTASTLTTKYGNVSAQSVGAI
QRQLLVLENQGADKFFGEPALNIADLMRVDRSGYGTISVLAADKLMGAPRLYACFLLWLLSELFERLPEVGDPDKPKLVF
FFDEAHLLFDEAPKALLDKVEQVVRLIRSKGVGVYFVSQNPLDIPESVLAQLGNRVQHALRAFTPRDQKAVKAAAETFRP
NPDLDTAQVIMELGKGEALVSMLEGNGVPSMVERTLIRPPCGRIGPLSADERAAVMARSPVGHIYDTPIDRESAFEMLQK
RIEEKAAPQEAAASDGGGFLGGVLDSVLGTGQAAGRTPSGTARSGGRPSTRMTTTEVVVNQVARTVATGLGRAILRGILG
SIRR

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiB [H]

Homologues:

Organism=Escherichia coli, GI1790714, Length=500, Percent_Identity=55.8, Blast_Score=531, Evalue=1e-152,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008571 [H]

Pfam domain/function: PF05872 DUF853 [H]

EC number: NA

Molecular weight: Translated: 60056; Mature: 59924

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTPSTRPPATGPRTGKAPVADAAPPASVGPTEPKANPWGPAAQEEGDGRILVGRSFLG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHC
RSEAAKAGTSAKDEYLTLRLANRHGLVTGATGTGKTVTLQVLAEGFSRAGVPVFAADIKG
CHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCCCEEEHHHHHHHHHHCCCCEEEECCCC
DLSGVAALGEAKDFLVERAQQVGITYTPDSFPVIFWDLFGEQGHPIRATVSEMGPLLLAR
CHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
LMGLNDTQEGVLNIVFRLADEQGLPILDLKDLRAMLAEVAQTASTLTTKYGNVSAQSVGA
HHCCCCHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IQRQLLVLENQGADKFFGEPALNIADLMRVDRSGYGTISVLAADKLMGAPRLYACFLLWL
HHHHHHHEECCCCHHHCCCCCCCHHHHHHHCCCCCCEEEEEEHHHHHCCHHHHHHHHHHH
LSELFERLPEVGDPDKPKLVFFFDEAHLLFDEAPKALLDKVEQVVRLIRSKGVGVYFVSQ
HHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEECC
NPLDIPESVLAQLGNRVQHALRAFTPRDQKAVKAAAETFRPNPDLDTAQVIMELGKGEAL
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH
VSMLEGNGVPSMVERTLIRPPCGRIGPLSADERAAVMARSPVGHIYDTPIDRESAFEMLQ
HHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH
KRIEEKAAPQEAAASDGGGFLGGVLDSVLGTGQAAGRTPSGTARSGGRPSTRMTTTEVVV
HHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
NQVARTVATGLGRAILRGILGSIRR
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARTPSTRPPATGPRTGKAPVADAAPPASVGPTEPKANPWGPAAQEEGDGRILVGRSFLG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHC
RSEAAKAGTSAKDEYLTLRLANRHGLVTGATGTGKTVTLQVLAEGFSRAGVPVFAADIKG
CHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCCCEEEHHHHHHHHHHCCCCEEEECCCC
DLSGVAALGEAKDFLVERAQQVGITYTPDSFPVIFWDLFGEQGHPIRATVSEMGPLLLAR
CHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
LMGLNDTQEGVLNIVFRLADEQGLPILDLKDLRAMLAEVAQTASTLTTKYGNVSAQSVGA
HHCCCCHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IQRQLLVLENQGADKFFGEPALNIADLMRVDRSGYGTISVLAADKLMGAPRLYACFLLWL
HHHHHHHEECCCCHHHCCCCCCCHHHHHHHCCCCCCEEEEEEHHHHHCCHHHHHHHHHHH
LSELFERLPEVGDPDKPKLVFFFDEAHLLFDEAPKALLDKVEQVVRLIRSKGVGVYFVSQ
HHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEEECC
NPLDIPESVLAQLGNRVQHALRAFTPRDQKAVKAAAETFRPNPDLDTAQVIMELGKGEAL
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH
VSMLEGNGVPSMVERTLIRPPCGRIGPLSADERAAVMARSPVGHIYDTPIDRESAFEMLQ
HHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH
KRIEEKAAPQEAAASDGGGFLGGVLDSVLGTGQAAGRTPSGTARSGGRPSTRMTTTEVVV
HHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
NQVARTVATGLGRAILRGILGSIRR
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]