Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is 154247222

Identifier: 154247222

GI number: 154247222

Start: 3657414

End: 3658637

Strand: Direct

Name: 154247222

Synonym: Xaut_3294

Alternate gene names: NA

Gene position: 3657414-3658637 (Clockwise)

Preceding gene: 154247220

Following gene: 154247223

Centisome position: 68.89

GC content: 63.89

Gene sequence:

>1224_bases
ATGGAACCTATCCTTCACGAGTGGGGCAGCCTGTTGCTGCGCTGGACGCACATCATCGCCGGCATGGCGTGGATCGGCTC
GTCCTTCTACTTCATGCATCTCGACGCCAGCCTGAAGGCGACCCCCGACATTCCCGCCGGCAAGGGCGGCGAGGCGTGGG
AAGTGCACGGCGGCGGCTTCTACCAGGTGAAGAAGTATCTGGTGGCCCCGAGCTTCCTGCCCGAGGAGCTGGGCTGGCAC
AAGTGGCAGTCCTACGCCACCTGGCTCACCGGTTTCTTCCTGCTGATCTGGCTCTATTACTACAAGTCGTCCATCTATCT
CATCGACCCGGCGGTGATGAACCTGAAGCCGTTCGTCGCCTTCGTCATCGGCATGGGCGGGCTGGCTTTGGGCTGGATCG
CCTATGACCAGCTGTGCCGCTCCCGGCTCGGCAACAATCCCATGGCGGTGGGCGTCATCGTGTTCGTCGGCGTGGTCGTG
GCGGCCTACCTGTTCCAGCAGGTGTTCTCGGCCCGTGCCGCCTTTATCCACACTGGTGCGCTCATGGCCACCATCATGAG
CGGCAACGTCTTCTTCGTCATCATCCCCAACCAGCACAAGGTGGTGGCGGCGCTGAAGGCGGGGCAGGTGCCGGACCCCT
ATTACGGCAAGACCGCGAAGCTCAGGTCAGGGCACAACAATTATTTCACGCTGCCCGTCGTCTTCCTGATGATCTCGAAC
CACTATCCGCTCACTTATTCCACGCCCTATGCCTATGTCATCGTGGCGCTGTCGCTCGTGGTGGGCACGGTGATCCGCTA
TTACTACAATGAGCGGCATGCCGGGCGTGGTGACAAGGCGTGGTGCTGGCTGGTGGCTGCGGTGTGCATCATCCTCGCCA
TCGCCATCTCGGCCACCACCACCCCCATGGGCCGCACTGCCCTCGGCTTGCCGCCGCTGGTGAGCGTCGCCTATGCCCGC
AGCGGGCCGCCGGTGGAGGTGCCGGATGATGTCCAGAACATCGTCATGGGCCGCTGCTCCATGTGTCATGCCTCCGAGCC
GCTCTACGAGGGCATCGTCATCGCCCCGCGCGGCGTGCTGCTGGATACGCCGGAGCACATCGCCCGCAACCGCGACCTCA
TCGTGGTGCAGGCCGGCCTCACCCACGCCATGCCGCCCAACAACATCACCGAGCTGTCGCAGGAAGACCGCGAGGTGCTG
AAGGCCTGGGGGGCGGGCAAGTAA

Upstream 100 bases:

>100_bases
TGAGAGACCGCGTCATCCCATGTGCTTGCGGCGCAAGCCCATGGGCGCGGGCTCCGAAGGAAATGCCCCTTCGCCTTCCA
GCTACGGGACCTGAACGGAC

Downstream 100 bases:

>100_bases
GGCTGGTCCCACGTCTTGTGATGGCCGCAGCGCATGCGGGTTGCGGCCATCACGCCTTGTCGTTTGCGTCGAAAGCGCAA
TAAAAATGTATGTAAAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Cytochrome C Subfamily; Cytochrome C Region

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MEPILHEWGSLLLRWTHIIAGMAWIGSSFYFMHLDASLKATPDIPAGKGGEAWEVHGGGFYQVKKYLVAPSFLPEELGWH
KWQSYATWLTGFFLLIWLYYYKSSIYLIDPAVMNLKPFVAFVIGMGGLALGWIAYDQLCRSRLGNNPMAVGVIVFVGVVV
AAYLFQQVFSARAAFIHTGALMATIMSGNVFFVIIPNQHKVVAALKAGQVPDPYYGKTAKLRSGHNNYFTLPVVFLMISN
HYPLTYSTPYAYVIVALSLVVGTVIRYYYNERHAGRGDKAWCWLVAAVCIILAIAISATTTPMGRTALGLPPLVSVAYAR
SGPPVEVPDDVQNIVMGRCSMCHASEPLYEGIVIAPRGVLLDTPEHIARNRDLIVVQAGLTHAMPPNNITELSQEDREVL
KAWGAGK

Sequences:

>Translated_407_residues
MEPILHEWGSLLLRWTHIIAGMAWIGSSFYFMHLDASLKATPDIPAGKGGEAWEVHGGGFYQVKKYLVAPSFLPEELGWH
KWQSYATWLTGFFLLIWLYYYKSSIYLIDPAVMNLKPFVAFVIGMGGLALGWIAYDQLCRSRLGNNPMAVGVIVFVGVVV
AAYLFQQVFSARAAFIHTGALMATIMSGNVFFVIIPNQHKVVAALKAGQVPDPYYGKTAKLRSGHNNYFTLPVVFLMISN
HYPLTYSTPYAYVIVALSLVVGTVIRYYYNERHAGRGDKAWCWLVAAVCIILAIAISATTTPMGRTALGLPPLVSVAYAR
SGPPVEVPDDVQNIVMGRCSMCHASEPLYEGIVIAPRGVLLDTPEHIARNRDLIVVQAGLTHAMPPNNITELSQEDREVL
KAWGAGK
>Mature_407_residues
MEPILHEWGSLLLRWTHIIAGMAWIGSSFYFMHLDASLKATPDIPAGKGGEAWEVHGGGFYQVKKYLVAPSFLPEELGWH
KWQSYATWLTGFFLLIWLYYYKSSIYLIDPAVMNLKPFVAFVIGMGGLALGWIAYDQLCRSRLGNNPMAVGVIVFVGVVV
AAYLFQQVFSARAAFIHTGALMATIMSGNVFFVIIPNQHKVVAALKAGQVPDPYYGKTAKLRSGHNNYFTLPVVFLMISN
HYPLTYSTPYAYVIVALSLVVGTVIRYYYNERHAGRGDKAWCWLVAAVCIILAIAISATTTPMGRTALGLPPLVSVAYAR
SGPPVEVPDDVQNIVMGRCSMCHASEPLYEGIVIAPRGVLLDTPEHIARNRDLIVVQAGLTHAMPPNNITELSQEDREVL
KAWGAGK

Specific function: Unknown

COG id: COG3748

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44868; Mature: 44868

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPILHEWGSLLLRWTHIIAGMAWIGSSFYFMHLDASLKATPDIPAGKGGEAWEVHGGGF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCH
YQVKKYLVAPSFLPEELGWHKWQSYATWLTGFFLLIWLYYYKSSIYLIDPAVMNLKPFVA
HHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH
FVIGMGGLALGWIAYDQLCRSRLGNNPMAVGVIVFVGVVVAAYLFQQVFSARAAFIHTGA
HHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMATIMSGNVFFVIIPNQHKVVAALKAGQVPDPYYGKTAKLRSGHNNYFTLPVVFLMISN
HHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCEEHHHHHHHHHCC
HYPLTYSTPYAYVIVALSLVVGTVIRYYYNERHAGRGDKAWCWLVAAVCIILAIAISATT
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
TPMGRTALGLPPLVSVAYARSGPPVEVPDDVQNIVMGRCSMCHASEPLYEGIVIAPRGVL
CCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCEEECCCCCE
LDTPEHIARNRDLIVVQAGLTHAMPPNNITELSQEDREVLKAWGAGK
ECCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEPILHEWGSLLLRWTHIIAGMAWIGSSFYFMHLDASLKATPDIPAGKGGEAWEVHGGGF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCH
YQVKKYLVAPSFLPEELGWHKWQSYATWLTGFFLLIWLYYYKSSIYLIDPAVMNLKPFVA
HHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH
FVIGMGGLALGWIAYDQLCRSRLGNNPMAVGVIVFVGVVVAAYLFQQVFSARAAFIHTGA
HHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMATIMSGNVFFVIIPNQHKVVAALKAGQVPDPYYGKTAKLRSGHNNYFTLPVVFLMISN
HHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHCCCCCCCEEHHHHHHHHHCC
HYPLTYSTPYAYVIVALSLVVGTVIRYYYNERHAGRGDKAWCWLVAAVCIILAIAISATT
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
TPMGRTALGLPPLVSVAYARSGPPVEVPDDVQNIVMGRCSMCHASEPLYEGIVIAPRGVL
CCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCEEECCCCCE
LDTPEHIARNRDLIVVQAGLTHAMPPNNITELSQEDREVLKAWGAGK
ECCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA