Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is cobG [H]

Identifier: 154247213

GI number: 154247213

Start: 3644844

End: 3646160

Strand: Reverse

Name: cobG [H]

Synonym: Xaut_3285

Alternate gene names: 154247213

Gene position: 3646160-3644844 (Counterclockwise)

Preceding gene: 154247214

Following gene: 154247212

Centisome position: 68.68

GC content: 74.26

Gene sequence:

>1317_bases
ATGAGCCCGCGCCCGCCCGCGCGCCGGGGCGCCTGCCCTGCCTTCCTCGCGCCCATGGAAACCGGCGACGGCTTGATCCT
GCGCCTCGTGCCGGCGGAGGGCGCCATCTCCTCCGGCCAGTTGCGCGGTCTGGCCCGCGCGGCCACCGCCTTCGGCAATT
CCATGATGGAGATCACCGCTCGCGGCAGCCTTCAGGTGCGCGGGCTGACGGCGGAAACGGTGGCGCCGCTTCAGGATGCT
GTGCTCGCGCTGGGCATTACGCCGCGCCTCGGCCTCGCCATCGATATCTCCCCCCTGTCGGGGCTCGACCCCCGGGAGAT
TGCCGATGCCCGTCCCCTCGCCCAACGCATCCGGGAGGGTGCGGCAGGGCTTGCAGGCAAGCTGGGGCCGAAGGTGTCCG
TGGTCGTCGATGGCGGCGGCGCCATCAGCCTTGGCGGCCACAAGGCGGATGTGCGCCTCGTCGCCATGCGCTCCAGCCCG
GGCGTGAGGTGGTCCATAACCATCGGCGGCGGCGCACCGGAACTGCTGGCGGAGCAGGATGCGGCGTCGCTCGCCCTCGA
CGCCCTGTCGCGGATCGCCGCCCTCGGCCGCCGCGCCCGCGCCACCGACCTGCTGGGGTGCGCCGCGACGCAACCCGCCA
CCTCCGGTGATGACGGCACGCCCGCCACTCCGCTGGGCACCTTCTCCCTCGCCGGCGGCCGCTTCGCCTGCGGCATCGGC
CTGCCCTTCGGCGCCGGCGCGGCCGACCTGTTCGCGGCTCTCGCCGATGCCGCGGAAAAGGCCGGCGCCCGCGACCTGCG
GCCGGCCACCGAGCGGGTGCTCCTCGCCACCGGCCTCGACGCGGAGGGCGCCCATGCCTTCGCGGCCGACGCCCGGCGGC
TCGGCTGCCTGACGGCGCCCGACGATCCCCGCGCCTTCATCGCCGCGTGCCCCGGCGCGCCGGCCTGCGTCTGCGCTCAT
TTTCCGGCGCGCGACCTCGCGCCCAATGTCGCCGAGGCCCTTGCGCCGCTGCTGGACGGGACGGTGACGGTACATTTGTC
CGCCTGCGCCAAGGGCTGCGCCCATCCCGCGCCGGCGACCCTCACCTTCGTGGGCATGGACGAGGGGATCGCTCTGGTGC
ATGAGGGCGCACCGTCCGGGGCACGCGGTCCGGCGATCGCGGTGGATGCCTTGGTGGCGACGCTCGCAACGCTCGCCGCC
ACGTCCCGCGCGCCCGGCGAGACGGGACGCGGGCTTCTGGCCCGGATGCAAGAGGCAGGTTTACCGGCGGGCCTGTGGCT
GCGCGAAGGAAACGACAGACCGATGGTGAAGACGTGA

Upstream 100 bases:

>100_bases
GCCGCAACGCCCTCGACGCCGATCTGGAAGGCCTCCTCGCGGAGGCTGCCCCGCTTCAAGAAGCCGCGCCTCAAGAAGAC
ACACCGAAGGAGGCGGCCGA

Downstream 100 bases:

>100_bases
CGAGCCGCGCAGCATGACCCTCCCCTTCAACTACGTGCGCGACGGCACCGCCATCTACGAGCGCTCCTTCGCCATTATCC
GCGCCGAGGCCGACCTGTCG

Product: precorrin-3B synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MSPRPPARRGACPAFLAPMETGDGLILRLVPAEGAISSGQLRGLARAATAFGNSMMEITARGSLQVRGLTAETVAPLQDA
VLALGITPRLGLAIDISPLSGLDPREIADARPLAQRIREGAAGLAGKLGPKVSVVVDGGGAISLGGHKADVRLVAMRSSP
GVRWSITIGGGAPELLAEQDAASLALDALSRIAALGRRARATDLLGCAATQPATSGDDGTPATPLGTFSLAGGRFACGIG
LPFGAGAADLFAALADAAEKAGARDLRPATERVLLATGLDAEGAHAFAADARRLGCLTAPDDPRAFIAACPGAPACVCAH
FPARDLAPNVAEALAPLLDGTVTVHLSACAKGCAHPAPATLTFVGMDEGIALVHEGAPSGARGPAIAVDALVATLATLAA
TSRAPGETGRGLLARMQEAGLPAGLWLREGNDRPMVKT

Sequences:

>Translated_438_residues
MSPRPPARRGACPAFLAPMETGDGLILRLVPAEGAISSGQLRGLARAATAFGNSMMEITARGSLQVRGLTAETVAPLQDA
VLALGITPRLGLAIDISPLSGLDPREIADARPLAQRIREGAAGLAGKLGPKVSVVVDGGGAISLGGHKADVRLVAMRSSP
GVRWSITIGGGAPELLAEQDAASLALDALSRIAALGRRARATDLLGCAATQPATSGDDGTPATPLGTFSLAGGRFACGIG
LPFGAGAADLFAALADAAEKAGARDLRPATERVLLATGLDAEGAHAFAADARRLGCLTAPDDPRAFIAACPGAPACVCAH
FPARDLAPNVAEALAPLLDGTVTVHLSACAKGCAHPAPATLTFVGMDEGIALVHEGAPSGARGPAIAVDALVATLATLAA
TSRAPGETGRGLLARMQEAGLPAGLWLREGNDRPMVKT
>Mature_437_residues
SPRPPARRGACPAFLAPMETGDGLILRLVPAEGAISSGQLRGLARAATAFGNSMMEITARGSLQVRGLTAETVAPLQDAV
LALGITPRLGLAIDISPLSGLDPREIADARPLAQRIREGAAGLAGKLGPKVSVVVDGGGAISLGGHKADVRLVAMRSSPG
VRWSITIGGGAPELLAEQDAASLALDALSRIAALGRRARATDLLGCAATQPATSGDDGTPATPLGTFSLAGGRFACGIGL
PFGAGAADLFAALADAAEKAGARDLRPATERVLLATGLDAEGAHAFAADARRLGCLTAPDDPRAFIAACPGAPACVCAHF
PARDLAPNVAEALAPLLDGTVTVHLSACAKGCAHPAPATLTFVGMDEGIALVHEGAPSGARGPAIAVDALVATLATLAAT
SRAPGETGRGLLARMQEAGLPAGLWLREGNDRPMVKT

Specific function: Catalyzes the elimination of C-20 in precorrin-3A to form precorrin-3B [H]

COG id: COG0155

COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012798
- InterPro:   IPR005117
- InterPro:   IPR006066 [H]

Pfam domain/function: PF03460 NIR_SIR_ferr [H]

EC number: =1.14.13.83 [H]

Molecular weight: Translated: 43807; Mature: 43676

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRPPARRGACPAFLAPMETGDGLILRLVPAEGAISSGQLRGLARAATAFGNSMMEITA
CCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEE
RGSLQVRGLTAETVAPLQDAVLALGITPRLGLAIDISPLSGLDPREIADARPLAQRIREG
CCCEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
AAGLAGKLGPKVSVVVDGGGAISLGGHKADVRLVAMRSSPGVRWSITIGGGAPELLAEQD
HCCCHHCCCCEEEEEEECCCEEEECCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHH
AASLALDALSRIAALGRRARATDLLGCAATQPATSGDDGTPATPLGTFSLAGGRFACGIG
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEC
LPFGAGAADLFAALADAAEKAGARDLRPATERVLLATGLDAEGAHAFAADARRLGCLTAP
CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHCCCCCCC
DDPRAFIAACPGAPACVCAHFPARDLAPNVAEALAPLLDGTVTVHLSACAKGCAHPAPAT
CCCCEEEEECCCCCEEEEECCCCHHCCCHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCE
LTFVGMDEGIALVHEGAPSGARGPAIAVDALVATLATLAATSRAPGETGRGLLARMQEAG
EEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
LPAGLWLREGNDRPMVKT
CCCEEEEEECCCCCCCCC
>Mature Secondary Structure 
SPRPPARRGACPAFLAPMETGDGLILRLVPAEGAISSGQLRGLARAATAFGNSMMEITA
CCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEE
RGSLQVRGLTAETVAPLQDAVLALGITPRLGLAIDISPLSGLDPREIADARPLAQRIREG
CCCEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
AAGLAGKLGPKVSVVVDGGGAISLGGHKADVRLVAMRSSPGVRWSITIGGGAPELLAEQD
HCCCHHCCCCEEEEEEECCCEEEECCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHH
AASLALDALSRIAALGRRARATDLLGCAATQPATSGDDGTPATPLGTFSLAGGRFACGIG
HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEC
LPFGAGAADLFAALADAAEKAGARDLRPATERVLLATGLDAEGAHAFAADARRLGCLTAP
CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCCCCCCHHHHHHHHHCCCCCCC
DDPRAFIAACPGAPACVCAHFPARDLAPNVAEALAPLLDGTVTVHLSACAKGCAHPAPAT
CCCCEEEEECCCCCEEEEECCCCHHCCCHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCE
LTFVGMDEGIALVHEGAPSGARGPAIAVDALVATLATLAATSRAPGETGRGLLARMQEAG
EEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
LPAGLWLREGNDRPMVKT
CCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2211521 [H]