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The map label for this gene is cbiD

Identifier: 154247205

GI number: 154247205

Start: 3638287

End: 3639417

Strand: Direct

Name: cbiD

Synonym: Xaut_3277

Alternate gene names: 154247205

Gene position: 3638287-3639417 (Clockwise)

Preceding gene: 154247203

Following gene: 154247209

Centisome position: 68.53

GC content: 73.39

Gene sequence:

>1131_bases
ATGAGCGACGTGCCGAGCGATGGTCCCGAAGGCGCCCCCACCGACCGTCCGCTGAAGCGCGGCTGGACCACGGGCACCTG
TGCCGCCGGCGCGGCCAAGGCCGCTTTTGCCGCGCTCGTCACCGGCGCCTTTCCCGATCCGGTCGAGGTGGAACTGCCCG
GCGGCGCCCGTCCCGCCTTCGCCCTCGCGGTTCAGGATCTCGGCCCCGACAGCGCCATGGCCGGCATCGTCAAGGATGCG
GGCGACGATCCGGATGTGACCCACGGTGCCTTGGTGCGCGCCACCGTCCGACGCGGGGCGACGGGGGCGGGCGTCACCTT
CCGGGCCGGGGAGGGGGTGGGCACGGTGACGCGGCCGGGCCTGCCGATCCCGCCCGGCGAGCCGGCCATCAATCCCGTGC
CGCGCCGCATGATCGCCGCCGGCATCGCCGAGGTGGCGCGCGCGGCGGGCGTTGCGGCCGATGCGGACGTGGAAATCTCC
ATCGCCGACGGGGCGCGCCTCGCGCTCAAGACGCTCAATCCGCGCCTCGGCATCGTCGGCGGGCTCTCGGTGCTGGGCAC
CACGGGCATCGTCGTGCCCTATTCCTGCGCGGCGTGGATCCACTCCATCCATCGCGGCATCGATGTGGCTCGCGCCATGG
GGCTGGATCACGTGGCCGGGGCCACCGGCAACGCCTCCGAGCAGGCGGTGCAGAAGCTGCATGGCCTCGACGAGGTGGCG
CTCATCGACATGGGCGATTTCGTCGGCGGCATGCTGAAATATGTGCGCGCCCATCCCGTGGCGAAGGTGACGGTGGCCGG
CGGCGTCGCCAAGATGACCAAGCTCGGCCAAGGTTTCCTCGATCTCCACTCCAAGCGCGGCCGCGCCGACATGGCTGCCC
TCGCCACTCTGGTGTCGGGCGCCGGCGCCGGGGCGGACCTCGCGGCGCGCATCGGCGCCGCGCACATGGTGGCGGAGGCG
TTTCAGATTGCCCGCGTCGCAGGCTTCCCGCTGGGCGATTGCGTGGCCCAGGCCGCCTGGACCACCGCCGCGCGGGCGCT
CGGCCGGGCCGACGTAGCGCTGGAGATCGTCGTGTTCGACCGCGACGGCACGCTCATGGGCCGCGCCCCCTTCGCCCCCG
CGCAGGCCTGA

Upstream 100 bases:

>100_bases
GAGCGCGGGGCGGCGATGAGGAGGCCACGGGGGGCATAGGGGGCGTTCACTGTTCGCTTCCCCCTTCCGCAGTCCGCCTG
GCCTCTCTATCAAGGCGGTC

Downstream 100 bases:

>100_bases
GCCGTCCCTCATTCTCCGCCCCCGCGAAAGCGGCGGACATAGGCGGTGTCGTAGAGCGCGCTCTCGCGGAAATCCTGCGC
CGCCAGCGCCCGCCCCACCA

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MSDVPSDGPEGAPTDRPLKRGWTTGTCAAGAAKAAFAALVTGAFPDPVEVELPGGARPAFALAVQDLGPDSAMAGIVKDA
GDDPDVTHGALVRATVRRGATGAGVTFRAGEGVGTVTRPGLPIPPGEPAINPVPRRMIAAGIAEVARAAGVAADADVEIS
IADGARLALKTLNPRLGIVGGLSVLGTTGIVVPYSCAAWIHSIHRGIDVARAMGLDHVAGATGNASEQAVQKLHGLDEVA
LIDMGDFVGGMLKYVRAHPVAKVTVAGGVAKMTKLGQGFLDLHSKRGRADMAALATLVSGAGAGADLAARIGAAHMVAEA
FQIARVAGFPLGDCVAQAAWTTAARALGRADVALEIVVFDRDGTLMGRAPFAPAQA

Sequences:

>Translated_376_residues
MSDVPSDGPEGAPTDRPLKRGWTTGTCAAGAAKAAFAALVTGAFPDPVEVELPGGARPAFALAVQDLGPDSAMAGIVKDA
GDDPDVTHGALVRATVRRGATGAGVTFRAGEGVGTVTRPGLPIPPGEPAINPVPRRMIAAGIAEVARAAGVAADADVEIS
IADGARLALKTLNPRLGIVGGLSVLGTTGIVVPYSCAAWIHSIHRGIDVARAMGLDHVAGATGNASEQAVQKLHGLDEVA
LIDMGDFVGGMLKYVRAHPVAKVTVAGGVAKMTKLGQGFLDLHSKRGRADMAALATLVSGAGAGADLAARIGAAHMVAEA
FQIARVAGFPLGDCVAQAAWTTAARALGRADVALEIVVFDRDGTLMGRAPFAPAQA
>Mature_375_residues
SDVPSDGPEGAPTDRPLKRGWTTGTCAAGAAKAAFAALVTGAFPDPVEVELPGGARPAFALAVQDLGPDSAMAGIVKDAG
DDPDVTHGALVRATVRRGATGAGVTFRAGEGVGTVTRPGLPIPPGEPAINPVPRRMIAAGIAEVARAAGVAADADVEISI
ADGARLALKTLNPRLGIVGGLSVLGTTGIVVPYSCAAWIHSIHRGIDVARAMGLDHVAGATGNASEQAVQKLHGLDEVAL
IDMGDFVGGMLKYVRAHPVAKVTVAGGVAKMTKLGQGFLDLHSKRGRADMAALATLVSGAGAGADLAARIGAAHMVAEAF
QIARVAGFPLGDCVAQAAWTTAARALGRADVALEIVVFDRDGTLMGRAPFAPAQA

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 37719; Mature: 37587

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVPSDGPEGAPTDRPLKRGWTTGTCAAGAAKAAFAALVTGAFPDPVEVELPGGARPAF
CCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCE
ALAVQDLGPDSAMAGIVKDAGDDPDVTHGALVRATVRRGATGAGVTFRAGEGVGTVTRPG
EEEEHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC
LPIPPGEPAINPVPRRMIAAGIAEVARAAGVAADADVEISIADGARLALKTLNPRLGIVG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCEE
GLSVLGTTGIVVPYSCAAWIHSIHRGIDVARAMGLDHVAGATGNASEQAVQKLHGLDEVA
CHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHCCCCEE
LIDMGDFVGGMLKYVRAHPVAKVTVAGGVAKMTKLGQGFLDLHSKRGRADMAALATLVSG
EEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHC
AGAGADLAARIGAAHMVAEAFQIARVAGFPLGDCVAQAAWTTAARALGRADVALEIVVFD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
RDGTLMGRAPFAPAQA
CCCCEECCCCCCCCCC
>Mature Secondary Structure 
SDVPSDGPEGAPTDRPLKRGWTTGTCAAGAAKAAFAALVTGAFPDPVEVELPGGARPAF
CCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCE
ALAVQDLGPDSAMAGIVKDAGDDPDVTHGALVRATVRRGATGAGVTFRAGEGVGTVTRPG
EEEEHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC
LPIPPGEPAINPVPRRMIAAGIAEVARAAGVAADADVEISIADGARLALKTLNPRLGIVG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCEE
GLSVLGTTGIVVPYSCAAWIHSIHRGIDVARAMGLDHVAGATGNASEQAVQKLHGLDEVA
CHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHCCCCEE
LIDMGDFVGGMLKYVRAHPVAKVTVAGGVAKMTKLGQGFLDLHSKRGRADMAALATLVSG
EEECHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHC
AGAGADLAARIGAAHMVAEAFQIARVAGFPLGDCVAQAAWTTAARALGRADVALEIVVFD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
RDGTLMGRAPFAPAQA
CCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA