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The map label for this gene is kdpE [H]

Identifier: 154247163

GI number: 154247163

Start: 3586979

End: 3587665

Strand: Reverse

Name: kdpE [H]

Synonym: Xaut_3235

Alternate gene names: 154247163

Gene position: 3587665-3586979 (Counterclockwise)

Preceding gene: 154247164

Following gene: 154247162

Centisome position: 67.58

GC content: 67.39

Gene sequence:

>687_bases
ATGAACGGCGTGAAGCTCCTCGTGGTGGATGACGAGCCGGCCATCCGCAAGCTGCTCAATGCCGGACTGTCCACCCAGGG
CTATGACGTGACCAGCGCCGCCACCGCCGCCGAGGCCATTGCCCGCGTCACCGAGGCCCGGCCCGACCTCATCATCCTCG
ACCTCGGACTGCCCGACATGCCGGGCCGCGACCTGCTCGCCCGCTGGCGTGCCGAAGGGCTGGATGCCCCCGTGGTGATC
CTCTCCAGCCGCACCGACGAGGCCGGCATCGTCGAGGCGCTGGAGGGAGGGGCGGACGATTATGTCACCAAGCCGTTCGG
CATGAATGAGCTGATCGCCCGCCTGCGCGTCGCGCTGCGCCACCGGTTGCAGCAGCAGGGGGAAAAGCCCCTGTTCAAGG
TGGGCGACCTGTCGGTGGACCTGGTGCGCCGCATCGTCCGGCTGAAGGAGCGGGAGGTGAAGCTCTCGCCCAAGGAATAC
GACATCCTGCGCCTCATGGTGCAGCATGCCGGCCGGGTGCTCACCCACGCCTTCATCCTGCAAAAGGTGTGGGGCAGCGC
TTATGACGTGCAATATCTGCGGGTCTATGTGCGCCAGCTGCGGCAGAAGCTGGAGGACAACCCTGAGCAACCGCGCTACA
TCCGCACCGAGACCGGCGTCGGCTACCGCCTCGCCGAGCCGGACTGA

Upstream 100 bases:

>100_bases
CGACCGGCGCGGCGCCGCCTTCACCATCCGCATGCCGGTGCCGCCCCAGGCCCGCGCGCTGAAGGCGTTGCCATGAGGGA
CGCACCATGAAAGACGCGTC

Downstream 100 bases:

>100_bases
GCTACGGCTGTCGATCGGGTGAACTGCACCCGGAACGGCAGCCGTCTCGACACGAATTCGCGATTTCGTTCGACAAAATC
CTGCTCTAGGCTCGTCCGGC

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNGVKLLVVDDEPAIRKLLNAGLSTQGYDVTSAATAAEAIARVTEARPDLIILDLGLPDMPGRDLLARWRAEGLDAPVVI
LSSRTDEAGIVEALEGGADDYVTKPFGMNELIARLRVALRHRLQQQGEKPLFKVGDLSVDLVRRIVRLKEREVKLSPKEY
DILRLMVQHAGRVLTHAFILQKVWGSAYDVQYLRVYVRQLRQKLEDNPEQPRYIRTETGVGYRLAEPD

Sequences:

>Translated_228_residues
MNGVKLLVVDDEPAIRKLLNAGLSTQGYDVTSAATAAEAIARVTEARPDLIILDLGLPDMPGRDLLARWRAEGLDAPVVI
LSSRTDEAGIVEALEGGADDYVTKPFGMNELIARLRVALRHRLQQQGEKPLFKVGDLSVDLVRRIVRLKEREVKLSPKEY
DILRLMVQHAGRVLTHAFILQKVWGSAYDVQYLRVYVRQLRQKLEDNPEQPRYIRTETGVGYRLAEPD
>Mature_228_residues
MNGVKLLVVDDEPAIRKLLNAGLSTQGYDVTSAATAAEAIARVTEARPDLIILDLGLPDMPGRDLLARWRAEGLDAPVVI
LSSRTDEAGIVEALEGGADDYVTKPFGMNELIARLRVALRHRLQQQGEKPLFKVGDLSVDLVRRIVRLKEREVKLSPKEY
DILRLMVQHAGRVLTHAFILQKVWGSAYDVQYLRVYVRQLRQKLEDNPEQPRYIRTETGVGYRLAEPD

Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786911, Length=226, Percent_Identity=44.2477876106195, Blast_Score=186, Evalue=8e-49,
Organism=Escherichia coli, GI1786784, Length=227, Percent_Identity=37.0044052863436, Blast_Score=130, Evalue=6e-32,
Organism=Escherichia coli, GI1789402, Length=225, Percent_Identity=36.8888888888889, Blast_Score=127, Evalue=5e-31,
Organism=Escherichia coli, GI1786599, Length=225, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1790552, Length=223, Percent_Identity=35.4260089686099, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=31.1111111111111, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=31.6742081447964, Blast_Score=113, Evalue=9e-27,
Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=30.0448430493274, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI1788394, Length=230, Percent_Identity=30.8695652173913, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=30.316742081448, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1790863, Length=235, Percent_Identity=29.3617021276596, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI145693140, Length=236, Percent_Identity=29.6610169491525, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787229, Length=229, Percent_Identity=27.9475982532751, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=30.3964757709251, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=32.7102803738318, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1790299, Length=119, Percent_Identity=32.7731092436975, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1787487, Length=103, Percent_Identity=34.9514563106796, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790437, Length=129, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25635; Mature: 25635

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGVKLLVVDDEPAIRKLLNAGLSTQGYDVTSAATAAEAIARVTEARPDLIILDLGLPDM
CCCEEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
PGRDLLARWRAEGLDAPVVILSSRTDEAGIVEALEGGADDYVTKPFGMNELIARLRVALR
CCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
HRLQQQGEKPLFKVGDLSVDLVRRIVRLKEREVKLSPKEYDILRLMVQHAGRVLTHAFIL
HHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QKVWGSAYDVQYLRVYVRQLRQKLEDNPEQPRYIRTETGVGYRLAEPD
HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCC
>Mature Secondary Structure
MNGVKLLVVDDEPAIRKLLNAGLSTQGYDVTSAATAAEAIARVTEARPDLIILDLGLPDM
CCCEEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
PGRDLLARWRAEGLDAPVVILSSRTDEAGIVEALEGGADDYVTKPFGMNELIARLRVALR
CCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
HRLQQQGEKPLFKVGDLSVDLVRRIVRLKEREVKLSPKEYDILRLMVQHAGRVLTHAFIL
HHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QKVWGSAYDVQYLRVYVRQLRQKLEDNPEQPRYIRTETGVGYRLAEPD
HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1532388; 8905232; 9278503 [H]