Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is xlnD [H]

Identifier: 154247159

GI number: 154247159

Start: 3581141

End: 3582343

Strand: Reverse

Name: xlnD [H]

Synonym: Xaut_3231

Alternate gene names: 154247159

Gene position: 3582343-3581141 (Counterclockwise)

Preceding gene: 154247160

Following gene: 154247158

Centisome position: 67.48

GC content: 74.15

Gene sequence:

>1203_bases
ATGGCCGACCCCATTCCCTTCGCGCCTGTCCCCTTTCGGCCACAGCCCGTCCGCGCGGCGCGCAGTGCCGTCGTGGTGGG
GGCGGGAATCGGCGGGCTTGCCGCCGCCATCGCCCTGGCCCGCGCCGGCCTCACGGTGCAGGTGGTGGAGCAGGCGAAGA
AGCTGAAGGAGGTCGGCGCCGGCCTCCAGCTCACCCCCAACGCCACCCGCATCCTGCGCGATTTCGGCCTGCTGAAGCGC
CTCGAGCAGGTGGCGGTGGCCCCGCGCTCCCTGGATGTGCGCGACGGGCGCAGCGGCGCCACCATCACCCGCGCCCATTA
CGGACCGGCGGTGACGCGCTACGGCGCGCCCTTCCTCGTGGTGCACCGGGCGGACCTGCAGAACCTGCTGGCCGATGCGG
CCCGGGAGGCAGGCGCCATCCTGACCCTCGGCTCCGACCTGACGGCGGTGGAACCCTCCTTCGGCGGCGTTCGCGCGGTG
GTGAAGCAGGGCGACACCCTGCTGGCCCATGGCGCCGACATCCTCGTCGGCGCCGACGGCGTGCGCTCTGCGGTGCGCGC
CCATCTCGGCGTCAAGGACCCGCCGGTCTTCGCCCAGCGCCTTGCCTATCGCGCCACCGTGCCGGTGCCGGCGCGCCATC
CGCCCGACGTGCGGCTCTATCTCGGCCGCGACGCCCATCTGGTGGTCTATCCGGTGAAGGGCGGCGAGGTGCTCAACCTC
GTCGCCATCGTGAAGCAGACCGAGCCCGTGGCCCGCTGGAGCGCGCCCGGCGACAGCGCCGCCGTGCATGCCGCCTTCGC
CTCCTGGACCGGCGAGGTGCGCGCGCTCCTGGAAAGCGCCTCCCATTTCCTGTGCTGGGGGCTCTACGACATCGATCCCC
TGCCCCGCTGGGGTTCCGGCCGCGTCACGCTCTTGGGCGATGCCGCCCATGCCATGCTGCCCTTCCTCGCCCAGGGCGCG
GCGCAGGCCATCGAGGATGCGGCGAGCCTTGCCGGCGCGCTGACCCGCGAGGGCGATGCCGCCGCCGCCCTGCGCGCCTA
TGAGAGCGAGCGGCGCGGCCGCACCGCCCGCATCCAGGGCGAGGCGCGGCGCAACGGCATGATCTACCACCTCTCCGGCG
CGCCCCGGATCGCCCGCGACCTGGTGCTGCGCCGCCAGGGCCCGGCCCTGCTGGACCGCTACGGCTGGATCTACGGCGCC
TGA

Upstream 100 bases:

>100_bases
GGCCAAGCCGGAAGAGTGCGAGTGGCACGACACCCCGGCGGCCACCGCCGCCTGACCGAAAGCTGATCCGCCGGCTCCCC
GCGCGGAGCCGGATGCCGCC

Downstream 100 bases:

>100_bases
GGGGCCGGGCCGGTACGGGCATCGCCGCCCGCCCTCTGGACCTTCCCCCACGGCCGTGGTATCGGCCCGCCTCTCTCCCG
AGGAAGATGTTCTCGTGCAG

Product: monooxygenase FAD-binding

Products: NA

Alternate protein names: Constitutive 3-hydroxybenzoate 6-hydroxylase [H]

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MADPIPFAPVPFRPQPVRAARSAVVVGAGIGGLAAAIALARAGLTVQVVEQAKKLKEVGAGLQLTPNATRILRDFGLLKR
LEQVAVAPRSLDVRDGRSGATITRAHYGPAVTRYGAPFLVVHRADLQNLLADAAREAGAILTLGSDLTAVEPSFGGVRAV
VKQGDTLLAHGADILVGADGVRSAVRAHLGVKDPPVFAQRLAYRATVPVPARHPPDVRLYLGRDAHLVVYPVKGGEVLNL
VAIVKQTEPVARWSAPGDSAAVHAAFASWTGEVRALLESASHFLCWGLYDIDPLPRWGSGRVTLLGDAAHAMLPFLAQGA
AQAIEDAASLAGALTREGDAAAALRAYESERRGRTARIQGEARRNGMIYHLSGAPRIARDLVLRRQGPALLDRYGWIYGA

Sequences:

>Translated_400_residues
MADPIPFAPVPFRPQPVRAARSAVVVGAGIGGLAAAIALARAGLTVQVVEQAKKLKEVGAGLQLTPNATRILRDFGLLKR
LEQVAVAPRSLDVRDGRSGATITRAHYGPAVTRYGAPFLVVHRADLQNLLADAAREAGAILTLGSDLTAVEPSFGGVRAV
VKQGDTLLAHGADILVGADGVRSAVRAHLGVKDPPVFAQRLAYRATVPVPARHPPDVRLYLGRDAHLVVYPVKGGEVLNL
VAIVKQTEPVARWSAPGDSAAVHAAFASWTGEVRALLESASHFLCWGLYDIDPLPRWGSGRVTLLGDAAHAMLPFLAQGA
AQAIEDAASLAGALTREGDAAAALRAYESERRGRTARIQGEARRNGMIYHLSGAPRIARDLVLRRQGPALLDRYGWIYGA
>Mature_399_residues
ADPIPFAPVPFRPQPVRAARSAVVVGAGIGGLAAAIALARAGLTVQVVEQAKKLKEVGAGLQLTPNATRILRDFGLLKRL
EQVAVAPRSLDVRDGRSGATITRAHYGPAVTRYGAPFLVVHRADLQNLLADAAREAGAILTLGSDLTAVEPSFGGVRAVV
KQGDTLLAHGADILVGADGVRSAVRAHLGVKDPPVFAQRLAYRATVPVPARHPPDVRLYLGRDAHLVVYPVKGGEVLNLV
AIVKQTEPVARWSAPGDSAAVHAAFASWTGEVRALLESASHFLCWGLYDIDPLPRWGSGRVTLLGDAAHAMLPFLAQGAA
QAIEDAASLAGALTREGDAAAALRAYESERRGRTARIQGEARRNGMIYHLSGAPRIARDLVLRRQGPALLDRYGWIYGA

Specific function: Catalyzes the NAD- or NADP-dependent conversion of 3- hydroxybenzoate to gentisate. The affinity of the enzyme toward NAD is twice as high as for NADP. The enzyme shows higher specific activities against the intermediates in the degradation of 2,5- xyleno

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-hydroxybenzoate 6-hydroxylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.14.13.24 [H]

Molecular weight: Translated: 42260; Mature: 42129

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADPIPFAPVPFRPQPVRAARSAVVVGAGIGGLAAAIALARAGLTVQVVEQAKKLKEVGA
CCCCCCCCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
GLQLTPNATRILRDFGLLKRLEQVAVAPRSLDVRDGRSGATITRAHYGPAVTRYGAPFLV
CCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCEEE
VHRADLQNLLADAAREAGAILTLGSDLTAVEPSFGGVRAVVKQGDTLLAHGADILVGADG
EEHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHCCCEEEECCCEEEEECHH
VRSAVRAHLGVKDPPVFAQRLAYRATVPVPARHPPDVRLYLGRDAHLVVYPVKGGEVLNL
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHH
VAIVKQTEPVARWSAPGDSAAVHAAFASWTGEVRALLESASHFLCWGLYDIDPLPRWGSG
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
RVTLLGDAAHAMLPFLAQGAAQAIEDAASLAGALTREGDAAAALRAYESERRGRTARIQG
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEC
EARRNGMIYHLSGAPRIARDLVLRRQGPALLDRYGWIYGA
HHHHCCEEEEECCCCHHHHHHHHHCCCCHHHHHCCCCCCC
>Mature Secondary Structure 
ADPIPFAPVPFRPQPVRAARSAVVVGAGIGGLAAAIALARAGLTVQVVEQAKKLKEVGA
CCCCCCCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
GLQLTPNATRILRDFGLLKRLEQVAVAPRSLDVRDGRSGATITRAHYGPAVTRYGAPFLV
CCEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCCEEE
VHRADLQNLLADAAREAGAILTLGSDLTAVEPSFGGVRAVVKQGDTLLAHGADILVGADG
EEHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHCCCEEEECCCEEEEECHH
VRSAVRAHLGVKDPPVFAQRLAYRATVPVPARHPPDVRLYLGRDAHLVVYPVKGGEVLNL
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCHHHH
VAIVKQTEPVARWSAPGDSAAVHAAFASWTGEVRALLESASHFLCWGLYDIDPLPRWGSG
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
RVTLLGDAAHAMLPFLAQGAAQAIEDAASLAGALTREGDAAAALRAYESERRGRTARIQG
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEC
EARRNGMIYHLSGAPRIARDLVLRRQGPALLDRYGWIYGA
HHHHCCEEEEECCCCHHHHHHHHHCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12909360 [H]