| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247039
Identifier: 154247039
GI number: 154247039
Start: 3450161
End: 3450562
Strand: Reverse
Name: 154247039
Synonym: Xaut_3110
Alternate gene names: NA
Gene position: 3450562-3450161 (Counterclockwise)
Preceding gene: 154247040
Following gene: 154247037
Centisome position: 65.0
GC content: 59.45
Gene sequence:
>402_bases ATGCTGACGCCCGTCCCGTTGCTGATCGTCCCCCTCGCGATCTACAACATCATCACCTTCCTGATGCCCGGCATCTCGTG GTCCACTGTGCTGACCACGATCTCGATGCTTTCCGGTGCGGAATGGACCATCAGCATGGCGGAGGCGTTCATCGCGCTCA GCCTGTTTTTCCTATTTTTCGAAATCCTGAAGGCGACGCGGATCACCCACCGCTCCATCGTCGATCACATGCTGTCCATG CTGGTGTTCGTGATCGGCATTACGGAGTTTCTGCTGGTGCGGCAGGCCGGCAATTCTGTGTTCGCCATCCTGCTGTGCAT CATGCTGCTGGACGTGATCGCCGGATTCTCGGTCTCGGTCCGGGTCGCCCAGCGCGACTTCTCCGTCGAGCCGCGGGAAT AG
Upstream 100 bases:
>100_bases GATGTGGCACCCATCCGCAGCGCAAGAGCACGCGCCGATCAGGTTGCACCGCAATCGGGGAGGATGAGCGCGCCCGCGCA CAGCGGCCCGAGGAGCACAT
Downstream 100 bases:
>100_bases GGCGCAACCGGATCAGTGTTCAGCCCATAATCCGGGAACAAGCAGGCACGGCAATGCGCGCGCGGAACAGCAAGGCCGCA AGAACAGGCACGCCGCAAAA
Product: putative transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MLTPVPLLIVPLAIYNIITFLMPGISWSTVLTTISMLSGAEWTISMAEAFIALSLFFLFFEILKATRITHRSIVDHMLSM LVFVIGITEFLLVRQAGNSVFAILLCIMLLDVIAGFSVSVRVAQRDFSVEPRE
Sequences:
>Translated_133_residues MLTPVPLLIVPLAIYNIITFLMPGISWSTVLTTISMLSGAEWTISMAEAFIALSLFFLFFEILKATRITHRSIVDHMLSM LVFVIGITEFLLVRQAGNSVFAILLCIMLLDVIAGFSVSVRVAQRDFSVEPRE >Mature_133_residues MLTPVPLLIVPLAIYNIITFLMPGISWSTVLTTISMLSGAEWTISMAEAFIALSLFFLFFEILKATRITHRSIVDHMLSM LVFVIGITEFLLVRQAGNSVFAILLCIMLLDVIAGFSVSVRVAQRDFSVEPRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14824; Mature: 14824
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTPVPLLIVPLAIYNIITFLMPGISWSTVLTTISMLSGAEWTISMAEAFIALSLFFLFF CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH EILKATRITHRSIVDHMLSMLVFVIGITEFLLVRQAGNSVFAILLCIMLLDVIAGFSVSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHE RVAQRDFSVEPRE EEHHCCCCCCCCC >Mature Secondary Structure MLTPVPLLIVPLAIYNIITFLMPGISWSTVLTTISMLSGAEWTISMAEAFIALSLFFLFF CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH EILKATRITHRSIVDHMLSMLVFVIGITEFLLVRQAGNSVFAILLCIMLLDVIAGFSVSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHE RVAQRDFSVEPRE EEHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA