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The map label for this gene is yddH [H]

Identifier: 154246997

GI number: 154246997

Start: 3407363

End: 3407893

Strand: Reverse

Name: yddH [H]

Synonym: Xaut_3068

Alternate gene names: 154246997

Gene position: 3407893-3407363 (Counterclockwise)

Preceding gene: 154247002

Following gene: 154246992

Centisome position: 64.19

GC content: 65.54

Gene sequence:

>531_bases
ATGAAGGATCTTCCCCTCGCCGAGGTCTACCAGCTCATCGAGCCCGGCCCGGTGGTGCTGCTGACCACCAGTCATCGCGG
ACGCCCCAACGTCATGACCATGTCGTGGCACATGATGGTGGAGTTCACCCCGCCGCTCATCGCCTGCATCGTCTCCCAGG
GCGATTTCAGCTTCACCGCCCTGCGCGCCACCAAGGAGTGCGTCATCGCCATTCCCGCCGTGGAGTTGGCCGAACAGGTG
GTGAAGGTGGGCAATTGCTCCGGCCGCGAGGTGGACAAGTTCACCACCATCGGCCTCACCCCCCGGCCCGCCGCCCTGGT
GGCGGCGCCGCTCATCAAGGAATGCTTCGCCAATCTGGAATGCCGGGTGGTGGAGACCCGCCTCGTCAACCGTTTCAACC
TGTTCGTGCTGGAAGTGGTGAAGGCGTGGCGCGACCCGGCCCAGAAGGCGCCGCGCACCATCCATCATCAGGGCTACGGC
ACCTTCGCGGTGGACGGGAACACCCTGAAGCTGCCCTCCCGGATGCCGTGA

Upstream 100 bases:

>100_bases
CGACGTGCTGGCGCCCAGCGCGGGATCGGCTCCCGATCCCGCCACAAAGCCCATAACACGCCGTGCAACCGGATCGGGCT
TCGCTTCAGGAGGAGCGGCC

Downstream 100 bases:

>100_bases
GGGTCGCGCAGGCGTTTTCCCTTACTTCGCCAGTTCCTTCAGCCCCAGCCGGATCAGAACCTCGGTCTTGGCCCCCTCCC
CCGCGCCGCGCAGGGCGGCG

Product: flavin reductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKDLPLAEVYQLIEPGPVVLLTTSHRGRPNVMTMSWHMMVEFTPPLIACIVSQGDFSFTALRATKECVIAIPAVELAEQV
VKVGNCSGREVDKFTTIGLTPRPAALVAAPLIKECFANLECRVVETRLVNRFNLFVLEVVKAWRDPAQKAPRTIHHQGYG
TFAVDGNTLKLPSRMP

Sequences:

>Translated_176_residues
MKDLPLAEVYQLIEPGPVVLLTTSHRGRPNVMTMSWHMMVEFTPPLIACIVSQGDFSFTALRATKECVIAIPAVELAEQV
VKVGNCSGREVDKFTTIGLTPRPAALVAAPLIKECFANLECRVVETRLVNRFNLFVLEVVKAWRDPAQKAPRTIHHQGYG
TFAVDGNTLKLPSRMP
>Mature_176_residues
MKDLPLAEVYQLIEPGPVVLLTTSHRGRPNVMTMSWHMMVEFTPPLIACIVSQGDFSFTALRATKECVIAIPAVELAEQV
VKVGNCSGREVDKFTTIGLTPRPAALVAAPLIKECFANLECRVVETRLVNRFNLFVLEVVKAWRDPAQKAPRTIHHQGYG
TFAVDGNTLKLPSRMP

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=178, Percent_Identity=30.8988764044944, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 19469; Mature: 19469

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLPLAEVYQLIEPGPVVLLTTSHRGRPNVMTMSWHMMVEFTPPLIACIVSQGDFSFTA
CCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEEECCHHEEEEECCCCCEEEE
LRATKECVIAIPAVELAEQVVKVGNCSGREVDKFTTIGLTPRPAALVAAPLIKECFANLE
ECCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCE
CRVVETRLVNRFNLFVLEVVKAWRDPAQKAPRTIHHQGYGTFAVDGNTLKLPSRMP
EEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEECCCCEEEEECCCEEECCCCCC
>Mature Secondary Structure
MKDLPLAEVYQLIEPGPVVLLTTSHRGRPNVMTMSWHMMVEFTPPLIACIVSQGDFSFTA
CCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEEECCHHEEEEECCCCCEEEE
LRATKECVIAIPAVELAEQVVKVGNCSGREVDKFTTIGLTPRPAALVAAPLIKECFANLE
ECCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCE
CRVVETRLVNRFNLFVLEVVKAWRDPAQKAPRTIHHQGYGTFAVDGNTLKLPSRMP
EEEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEECCCCEEEEECCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]