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The map label for this gene is exoX [C]

Identifier: 154246978

GI number: 154246978

Start: 3388259

End: 3389155

Strand: Direct

Name: exoX [C]

Synonym: Xaut_3049

Alternate gene names: 154246978

Gene position: 3388259-3389155 (Clockwise)

Preceding gene: 154246977

Following gene: 154246983

Centisome position: 63.82

GC content: 61.43

Gene sequence:

>897_bases
ATGACGACATCTTCTGATCATCTGGAGTCCATGGCGCAGACGCTAGAGGCTACCGGGGATTATCGCGTCATCCGGCGTCT
TAAGCCGCGTCCATCCAATATGCCGTCTCCCGCAACGCCCGTCCGACTCGGCATGGTGGTGGATGTCGAGACCACGGGGC
TAGATCCCCAGCGTGACGAGATCATAGAACTCGCCATGACGCCATTCAGCTACGGCTTGGATGGCACCATTTTCAGCGTG
GGCGACAGCTTCCAAGGGCTGCGTCAGCCGAGCGAGCCTATCCTCCCGGAAATCACCGCGATCACGGGCATCACCAACGA
GATGGTGGCCGGCCAGATCATTGATCCCGCCGTGGTGGCCACATTCGCGGCGCCGGCTTCACTCTTCATCGCGCACAACG
CGGCGTTCGACCGCCGCTTCTTTGAACGATTCAGTGACGTGTTCTCGACGAAGCCGTGGGCATGCTCGCTCAGCCAGATC
GACTGGGCGGCGGAAGGATTTCAGGGCGCGAAGCTCGCCTATCTCGCTCAGGCGGCCGGCTTCTTCTATGACCGCCACCG
CGCGATGCACGACTGTCTTGCGACGATCGAGCTGTTGGCGATGCAGCTGCCCCGATCTGGTGTTACGGGCCTTAGCCGCC
TTCTGGATGGTGCTCGTACTGTCTCCTGGCGCATCTGGGCGGAGAACTCGCCCTTCGACCTCAAGGATGTTCTCAAGGCG
CGGGGATACCGCTGGAACGGCGATCCCGGCCCGCATCCCCGCGCTTGGTATATCGACGTTCCCGAAGCCCAACGCGAGGC
CGAGGTGCGGTTCTTGAGCACGGAGATCTATCGGTATGAGGTCGATCCCCCCGTCCGGCGGATCGATGCCTATGATCGGT
TTTCAGATCGCATCTAA

Upstream 100 bases:

>100_bases
ACGCGCGCAAAGGCACGCACGACGATCATGACACCAAGGGATGATGTCTGTGTTTTGCTCAGACCCGTACCGGCATGACT
CAAGCCTCTGGGTATGAAGG

Downstream 100 bases:

>100_bases
GCGCCACCAAGGGTCGGGCTAACTCTTGCGCTGGTCGTATCCGTTGCCGCCCTCGACGTTTCCGGCCGCCTTCAATAAAT
CCCCGATGGAGCGTCCGCCG

Product: DNA polymerase III subunit epsilon

Products: NA

Alternate protein names: Exonuclease RNAse T And DNA Polymerase III; Exonuclease; Exonuclease Family Protein; DNA Polymerase III Epsilon Subunit; 3--5' Exonuclease; DNA Polymerase III Alpha Subunit; DNA Polymerase III Epsilon Subunit-Like Protein; DNAQ Family Exonuclease/DinG Family Helicase; DNA Polymerase; Exonuclease Family; Protein With DNA-Directed DNA Polymerase-Like Domain

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MTTSSDHLESMAQTLEATGDYRVIRRLKPRPSNMPSPATPVRLGMVVDVETTGLDPQRDEIIELAMTPFSYGLDGTIFSV
GDSFQGLRQPSEPILPEITAITGITNEMVAGQIIDPAVVATFAAPASLFIAHNAAFDRRFFERFSDVFSTKPWACSLSQI
DWAAEGFQGAKLAYLAQAAGFFYDRHRAMHDCLATIELLAMQLPRSGVTGLSRLLDGARTVSWRIWAENSPFDLKDVLKA
RGYRWNGDPGPHPRAWYIDVPEAQREAEVRFLSTEIYRYEVDPPVRRIDAYDRFSDRI

Sequences:

>Translated_298_residues
MTTSSDHLESMAQTLEATGDYRVIRRLKPRPSNMPSPATPVRLGMVVDVETTGLDPQRDEIIELAMTPFSYGLDGTIFSV
GDSFQGLRQPSEPILPEITAITGITNEMVAGQIIDPAVVATFAAPASLFIAHNAAFDRRFFERFSDVFSTKPWACSLSQI
DWAAEGFQGAKLAYLAQAAGFFYDRHRAMHDCLATIELLAMQLPRSGVTGLSRLLDGARTVSWRIWAENSPFDLKDVLKA
RGYRWNGDPGPHPRAWYIDVPEAQREAEVRFLSTEIYRYEVDPPVRRIDAYDRFSDRI
>Mature_297_residues
TTSSDHLESMAQTLEATGDYRVIRRLKPRPSNMPSPATPVRLGMVVDVETTGLDPQRDEIIELAMTPFSYGLDGTIFSVG
DSFQGLRQPSEPILPEITAITGITNEMVAGQIIDPAVVATFAAPASLFIAHNAAFDRRFFERFSDVFSTKPWACSLSQID
WAAEGFQGAKLAYLAQAAGFFYDRHRAMHDCLATIELLAMQLPRSGVTGLSRLLDGARTVSWRIWAENSPFDLKDVLKAR
GYRWNGDPGPHPRAWYIDVPEAQREAEVRFLSTEIYRYEVDPPVRRIDAYDRFSDRI

Specific function: Capable Of Degrading Both Single-Strand And Double- Strand DNA With 3' To 5' Polarity. Has Higher Affinity For ssDNA Ends Than For dsDNA. May Facilitate Recombinational Repair By Pre- Synaptic And/Or Post-Synaptic DNA Degradation. [C]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.11.- [C]

Molecular weight: Translated: 33408; Mature: 33277

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSSDHLESMAQTLEATGDYRVIRRLKPRPSNMPSPATPVRLGMVVDVETTGLDPQRDE
CCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHH
IIELAMTPFSYGLDGTIFSVGDSFQGLRQPSEPILPEITAITGITNEMVAGQIIDPAVVA
HHHHHHCCHHCCCCCEEEECCCCHHHHCCCCCCCCCHHHHHHCCHHHHHHCCCCCHHHHH
TFAAPASLFIAHNAAFDRRFFERFSDVFSTKPWACSLSQIDWAAEGFQGAKLAYLAQAAG
HHHCCHHEEEEHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHH
FFYDRHRAMHDCLATIELLAMQLPRSGVTGLSRLLDGARTVSWRIWAENSPFDLKDVLKA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHH
RGYRWNGDPGPHPRAWYIDVPEAQREAEVRFLSTEIYRYEVDPPVRRIDAYDRFSDRI
CCCCCCCCCCCCCCEEEEECCCCHHHHHHEEEEEEEEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTSSDHLESMAQTLEATGDYRVIRRLKPRPSNMPSPATPVRLGMVVDVETTGLDPQRDE
CCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHH
IIELAMTPFSYGLDGTIFSVGDSFQGLRQPSEPILPEITAITGITNEMVAGQIIDPAVVA
HHHHHHCCHHCCCCCEEEECCCCHHHHCCCCCCCCCHHHHHHCCHHHHHHCCCCCHHHHH
TFAAPASLFIAHNAAFDRRFFERFSDVFSTKPWACSLSQIDWAAEGFQGAKLAYLAQAAG
HHHCCHHEEEEHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHH
FFYDRHRAMHDCLATIELLAMQLPRSGVTGLSRLLDGARTVSWRIWAENSPFDLKDVLKA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHH
RGYRWNGDPGPHPRAWYIDVPEAQREAEVRFLSTEIYRYEVDPPVRRIDAYDRFSDRI
CCCCCCCCCCCCCCEEEEECCCCHHHHHHEEEEEEEEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA