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The map label for this gene is appY [C]

Identifier: 154246872

GI number: 154246872

Start: 3260992

End: 3262044

Strand: Reverse

Name: appY [C]

Synonym: Xaut_2937

Alternate gene names: 154246872

Gene position: 3262044-3260992 (Counterclockwise)

Preceding gene: 154246879

Following gene: 154246870

Centisome position: 61.44

GC content: 66.38

Gene sequence:

>1053_bases
ATGCGTGGTCCGGGTTCAATCGTCCTCGTCCGCGCAAAGGGCTTCGGCGCCTTGCCCGAGCAGATCGAAAGGCAGGCCGG
CGAACAGGCTCTCATCGACATGTTCGCCCGGGAGCACCTGCCGATGGCTCTACGGGACGCCCCGCAAACGCCCATACCGC
TCCATTCGATGATGGGCCTGTTCGCACGGGGCGCCGCGGCCCTGGACTACCGCACATTCGGCCTGGACGTGGGCGAGGAG
ATGACCCACAGGGGCTATGGCCTCTGGATCGAGCATGCGGCCGCGGCCCCAACGCTCGGCGAGGGCCTGCGCCGCGCGAT
AGCGACGAGCTGGGCCCACCAGAGCGGCGCGCGGCTGGAACTGGTCCGGGACGGCGGGCACCGTATCCAGCGGTTTGCAA
CGCCCACTTTTGACGTGAGCAAGGTGCAGCATTGTGACCACCTCCTCCCGCCCATGCTCACCTTCGTTCGCCTTTATCTC
GGCGCCCGATGGCGACCCGACTGGGCGGAAGTTGAATATGCACGCGACCCGGAAGCGAAGCAGGTGGAGGACCGCTTGCA
GGTGGATCTGCGTTGCGAGCGGCCAGGCTCTGGCCTTGCCCTGAAGGCGAGCGAACTGAGCCGCCGACGCATCAACAGGA
TCACAGGAAGGACGCGAATCGTCACTCTGCGGGACGTGCTTGCCGACGTCATTCTCTCCGACGCGCCGGAACCGGCACGC
GCGCTATCCGCCATTGTCGCGCTCCGCCTCCTCGATGGCCAGAGCGACATCGACGGCGCCGCGCACCTCGCCGGCCTCGG
AGTGCAAGGATTGCAGCGACGCTTGCGCGAGAAGGGATTCACGTATCGCGAGATCGTCGAAGAGGCGCGCCGCGCGCGGG
CCATCCGCCTCCTCGTCGAGACGCAGATGTCGATCCTCGCGATCTCTCTGTCCCTCGGCTACGATACGCACGGCAGCTTT
ACCCGAGCCTTCATCCGCTGGATGGGATGCTCGCCATCAGAATACCGGCGCAGTGTGTTGGCGGTGCCGGAGCCTCACGA
GGATCCGTGCTGA

Upstream 100 bases:

>100_bases
GTCTCCGGCTGTCGTTTGCTAGAGAAGCCTGAACGTGTCTTTGATCTAGGCCATATCATCCCGGCGCTCTTCGCATTTTG
CGTCACTCGACGAGGTTTCG

Downstream 100 bases:

>100_bases
TCAGTCGTGGGATTTTGGTGAAGCGGATGGGCAATAATCTGCACCGCCCACAACGATATCATGGTCTTGGAAGACGCGTA
CCGTCGAGGCGCGCGCTGTC

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC Family Transcription Regulator Protein

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MRGPGSIVLVRAKGFGALPEQIERQAGEQALIDMFAREHLPMALRDAPQTPIPLHSMMGLFARGAAALDYRTFGLDVGEE
MTHRGYGLWIEHAAAAPTLGEGLRRAIATSWAHQSGARLELVRDGGHRIQRFATPTFDVSKVQHCDHLLPPMLTFVRLYL
GARWRPDWAEVEYARDPEAKQVEDRLQVDLRCERPGSGLALKASELSRRRINRITGRTRIVTLRDVLADVILSDAPEPAR
ALSAIVALRLLDGQSDIDGAAHLAGLGVQGLQRRLREKGFTYREIVEEARRARAIRLLVETQMSILAISLSLGYDTHGSF
TRAFIRWMGCSPSEYRRSVLAVPEPHEDPC

Sequences:

>Translated_350_residues
MRGPGSIVLVRAKGFGALPEQIERQAGEQALIDMFAREHLPMALRDAPQTPIPLHSMMGLFARGAAALDYRTFGLDVGEE
MTHRGYGLWIEHAAAAPTLGEGLRRAIATSWAHQSGARLELVRDGGHRIQRFATPTFDVSKVQHCDHLLPPMLTFVRLYL
GARWRPDWAEVEYARDPEAKQVEDRLQVDLRCERPGSGLALKASELSRRRINRITGRTRIVTLRDVLADVILSDAPEPAR
ALSAIVALRLLDGQSDIDGAAHLAGLGVQGLQRRLREKGFTYREIVEEARRARAIRLLVETQMSILAISLSLGYDTHGSF
TRAFIRWMGCSPSEYRRSVLAVPEPHEDPC
>Mature_350_residues
MRGPGSIVLVRAKGFGALPEQIERQAGEQALIDMFAREHLPMALRDAPQTPIPLHSMMGLFARGAAALDYRTFGLDVGEE
MTHRGYGLWIEHAAAAPTLGEGLRRAIATSWAHQSGARLELVRDGGHRIQRFATPTFDVSKVQHCDHLLPPMLTFVRLYL
GARWRPDWAEVEYARDPEAKQVEDRLQVDLRCERPGSGLALKASELSRRRINRITGRTRIVTLRDVLADVILSDAPEPAR
ALSAIVALRLLDGQSDIDGAAHLAGLGVQGLQRRLREKGFTYREIVEEARRARAIRLLVETQMSILAISLSLGYDTHGSF
TRAFIRWMGCSPSEYRRSVLAVPEPHEDPC

Specific function: Induces The Synthesis Of Acid Phosphatase (Appa) And Several Other Polypeptides (Such As Appbc) During The Deceleration Phase Of Growth. It Also Acts As A Transcriptional Repressor For One Group Of Proteins That Are Synthesized Preferentially In Exponenti

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38989; Mature: 38989

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGPGSIVLVRAKGFGALPEQIERQAGEQALIDMFAREHLPMALRDAPQTPIPLHSMMGL
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHH
FARGAAALDYRTFGLDVGEEMTHRGYGLWIEHAAAAPTLGEGLRRAIATSWAHQSGARLE
HHCCCHHHEEEECCCCCCHHHHHCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCEEE
LVRDGGHRIQRFATPTFDVSKVQHCDHLLPPMLTFVRLYLGARWRPDWAEVEYARDPEAK
EEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHH
QVEDRLQVDLRCERPGSGLALKASELSRRRINRITGRTRIVTLRDVLADVILSDAPEPAR
HHHHHHCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCHHH
ALSAIVALRLLDGQSDIDGAAHLAGLGVQGLQRRLREKGFTYREIVEEARRARAIRLLVE
HHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
TQMSILAISLSLGYDTHGSFTRAFIRWMGCSPSEYRRSVLAVPEPHEDPC
HHHHHEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHEECCCCCCCCCC
>Mature Secondary Structure
MRGPGSIVLVRAKGFGALPEQIERQAGEQALIDMFAREHLPMALRDAPQTPIPLHSMMGL
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHH
FARGAAALDYRTFGLDVGEEMTHRGYGLWIEHAAAAPTLGEGLRRAIATSWAHQSGARLE
HHCCCHHHEEEECCCCCCHHHHHCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCEEE
LVRDGGHRIQRFATPTFDVSKVQHCDHLLPPMLTFVRLYLGARWRPDWAEVEYARDPEAK
EEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHH
QVEDRLQVDLRCERPGSGLALKASELSRRRINRITGRTRIVTLRDVLADVILSDAPEPAR
HHHHHHCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCHHH
ALSAIVALRLLDGQSDIDGAAHLAGLGVQGLQRRLREKGFTYREIVEEARRARAIRLLVE
HHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
TQMSILAISLSLGYDTHGSFTRAFIRWMGCSPSEYRRSVLAVPEPHEDPC
HHHHHEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA