| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is bcp [H]
Identifier: 154246868
GI number: 154246868
Start: 3257527
End: 3258204
Strand: Reverse
Name: bcp [H]
Synonym: Xaut_2933
Alternate gene names: 154246868
Gene position: 3258204-3257527 (Counterclockwise)
Preceding gene: 154246869
Following gene: 154246867
Centisome position: 61.37
GC content: 65.63
Gene sequence:
>678_bases ATGTCCCTCCAGGCGAAGCTTGACGCCTTCAAGGCCGATTTCGAAACGGGCAAACCGCCCTACAACGTGCCACCCGCGGT GATCGAAACCATGCGCCGCGCCACCGCTGAACTCATCGCCTCCGGCGCGGCACGGCAGGCGCTAAAGGCCGGCGAGAAGA TTCCCGCCTTCACCCTTGCGGACCCCGAGGGGAATGAGGTGTCGTCGGCCGACCTTCTCGCCAAGGGGCCGCTGGTCATC ACCTTCTATCGCGGCGTCTGGTGCCCCTATTGCAATATGGAATTGCAGGCGCTTCAGGAGGCGCTTCCGCAGCTCCAGGC GCTGGGCGCGAACCTGATCGCGATCTCGCCACAGAATCCGGTCAACAGCCGCAAGTCGGTCCGCCAGAACAAGCTGTCGT TCCCGATCCTGTCGGACCCTCGTAACGAGGTCGCCGCGGCGTTCGGTCTGCGGTTCGCGCTGCCGGATTATCTGGTCGAG CTCTACAAGTCCTTGAAGAACGACCTGCCGTCCTTCAACGGCGACCCGAGCTGGACCCTCCCCATGCCGGCCCGTTTCGT GGTCGGCCAGGACGGCACCATCCTCTATGCCGAGGTCAATCCGGACTATACCCGCCGGCCCGAACCGGCGGACATGCTGC CCGCCCTTCGCCGCGCCGCGGGTGCCACCGCCGCCTGA
Upstream 100 bases:
>100_bases GAAGGCATCAGCGCCGCCGAGGTCGCCCGCTCGATGGCGGCCGGCTGACGGCCGGCTGTCCTCGTCGCACACGCCATACC ACCCGACAAGGAGCACCCCC
Downstream 100 bases:
>100_bases TCCGCCCAGACATGCCCCGCCCATGAGAGCGGGGGGAGAACCCACCCATGCAACGGACCTTCCTCATCACCGGCGCCAGC AAGGGCATCGGCCTCGCACT
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSLQAKLDAFKADFETGKPPYNVPPAVIETMRRATAELIASGAARQALKAGEKIPAFTLADPEGNEVSSADLLAKGPLVI TFYRGVWCPYCNMELQALQEALPQLQALGANLIAISPQNPVNSRKSVRQNKLSFPILSDPRNEVAAAFGLRFALPDYLVE LYKSLKNDLPSFNGDPSWTLPMPARFVVGQDGTILYAEVNPDYTRRPEPADMLPALRRAAGATAA
Sequences:
>Translated_225_residues MSLQAKLDAFKADFETGKPPYNVPPAVIETMRRATAELIASGAARQALKAGEKIPAFTLADPEGNEVSSADLLAKGPLVI TFYRGVWCPYCNMELQALQEALPQLQALGANLIAISPQNPVNSRKSVRQNKLSFPILSDPRNEVAAAFGLRFALPDYLVE LYKSLKNDLPSFNGDPSWTLPMPARFVVGQDGTILYAEVNPDYTRRPEPADMLPALRRAAGATAA >Mature_224_residues SLQAKLDAFKADFETGKPPYNVPPAVIETMRRATAELIASGAARQALKAGEKIPAFTLADPEGNEVSSADLLAKGPLVIT FYRGVWCPYCNMELQALQEALPQLQALGANLIAISPQNPVNSRKSVRQNKLSFPILSDPRNEVAAAFGLRFALPDYLVEL YKSLKNDLPSFNGDPSWTLPMPARFVVGQDGTILYAEVNPDYTRRPEPADMLPALRRAAGATAA
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 24414; Mature: 24283
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQAKLDAFKADFETGKPPYNVPPAVIETMRRATAELIASGAARQALKAGEKIPAFTLA CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC DPEGNEVSSADLLAKGPLVITFYRGVWCPYCNMELQALQEALPQLQALGANLIAISPQNP CCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC VNSRKSVRQNKLSFPILSDPRNEVAAAFGLRFALPDYLVELYKSLKNDLPSFNGDPSWTL CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEC PMPARFVVGQDGTILYAEVNPDYTRRPEPADMLPALRRAAGATAA CCCCEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure SLQAKLDAFKADFETGKPPYNVPPAVIETMRRATAELIASGAARQALKAGEKIPAFTLA CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC DPEGNEVSSADLLAKGPLVITFYRGVWCPYCNMELQALQEALPQLQALGANLIAISPQNP CCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC VNSRKSVRQNKLSFPILSDPRNEVAAAFGLRFALPDYLVELYKSLKNDLPSFNGDPSWTL CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEC PMPARFVVGQDGTILYAEVNPDYTRRPEPADMLPALRRAAGATAA CCCCEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]