Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154246847

Identifier: 154246847

GI number: 154246847

Start: 3234409

End: 3235572

Strand: Reverse

Name: 154246847

Synonym: Xaut_2912

Alternate gene names: NA

Gene position: 3235572-3234409 (Counterclockwise)

Preceding gene: 154246850

Following gene: 154246845

Centisome position: 60.95

GC content: 68.47

Gene sequence:

>1164_bases
ATGAGCAAGTTCATCTGTGCCCATGCCGGCGATGCCAAATGGGAAATCGCCCTCGGGTCCTGCTGGGGCCAGGTCCGCTT
TCAGCTTCAGAATGCGCCCAAGCCCAATCTGGGCTGGTGCTACCTCACCGACCATTACACCCAGGCGGCGGGCAACATCA
TGGAGGCGCTGCGCGAGCACATGCCGGGGGTCCATTGGGTGGGCACGGTGGGTGTCGGCGTTGGCGCGGAAGGGGTGGAA
TATTTCGACGAGCCGGCCATGGTGCTCATGCTGGCCGATCTGCCACCGGACTCCTTCAAGCTGTTTTCCAGCCCAAAGCC
GCTGCAGGCGCTCCCGGAAGCCGGCTCGAACGGCTTCGAGGCCTTCACCGCCCTGGTCCATGCGGACGGCGGAAGCGCCG
ACCTGCCGATCCAGCTCAAGGACCTGAGCGGGAAGACCACCACCGGCTACCTGTTCGGTGGCCTGTCCTCGGCGCGGAAC
CAGCCCCTGTGCTTCGCCGACGAGGTGTTCCTCGGCGGGCTCTCCGGGGTGGCTTTCGGCCCTGAGGTTCCGGTGCTGTC
CCGGGTGACCCAGGGCTGCCAGCCCGTCGGCCCCCAGCGCACCATCACCCGCGCCGAAGGCAATTATCTGGTGACCCTGG
ACAAGGCCCGGGCCCTGGACTGCGTGCTGGAGGACCTGGGGCTGAGCCTCGACATCCCCGACCCGGAGTTGCGCAACGAA
CTGGCCCAGACCCTCGCGGGGCTGATCGCCGCCGACGAGGACGTGTCCGCCAAGCCCGGCCAGTTCGGCACCAATACCGA
GGTGCGCCATCTGCTGGGTGTCGGCCGCCAGAGCGGCGTCCTGGTGGTGGCGGAGCAGATCGCGGCGGGCATGAAGCTCG
CCTTCTGCAAGCGTAACGCGGAGGCGGCGAAGCACGACCTGCTGCGCATCGTCGGCGAGGTCCGGGCCCAGGCGGAGGCC
GCAGGCGGCATCAGGGGCGCCCTGTACATCAGCTGTTCCGGGCGGGGCGGCCCCCATTTCGGCCACCGCAACGCGGAATT
CCAGATGGTCAGCGAGGCCCTGGGCCCGGTGCCCCTCATCGGCTTCTTCGCCGGCGGCGAGATCGCCCGCCACCATCTCT
ACGGCTACACCGGGGTGCTGACGGTCTTTACCGGGGCGGCCTGA

Upstream 100 bases:

>100_bases
CCCATGGCGATCCGCACCAGTTCATGACCGCTCCCCGCCTTCCGGCGGGCAGTGTGCACCGTCCCTTTCAGACCCACCCC
TTTTGTGCAGATATCCTCAT

Downstream 100 bases:

>100_bases
GAGCGGGGACGAAAATGATGACACCACAGCGGTTTCCAGCAAAACCGACCCCGGTTCTCGCGCCCGTGGAGGCCTGAGCA
TGCCTGCGGCAGATCGAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSKFICAHAGDAKWEIALGSCWGQVRFQLQNAPKPNLGWCYLTDHYTQAAGNIMEALREHMPGVHWVGTVGVGVGAEGVE
YFDEPAMVLMLADLPPDSFKLFSSPKPLQALPEAGSNGFEAFTALVHADGGSADLPIQLKDLSGKTTTGYLFGGLSSARN
QPLCFADEVFLGGLSGVAFGPEVPVLSRVTQGCQPVGPQRTITRAEGNYLVTLDKARALDCVLEDLGLSLDIPDPELRNE
LAQTLAGLIAADEDVSAKPGQFGTNTEVRHLLGVGRQSGVLVVAEQIAAGMKLAFCKRNAEAAKHDLLRIVGEVRAQAEA
AGGIRGALYISCSGRGGPHFGHRNAEFQMVSEALGPVPLIGFFAGGEIARHHLYGYTGVLTVFTGAA

Sequences:

>Translated_387_residues
MSKFICAHAGDAKWEIALGSCWGQVRFQLQNAPKPNLGWCYLTDHYTQAAGNIMEALREHMPGVHWVGTVGVGVGAEGVE
YFDEPAMVLMLADLPPDSFKLFSSPKPLQALPEAGSNGFEAFTALVHADGGSADLPIQLKDLSGKTTTGYLFGGLSSARN
QPLCFADEVFLGGLSGVAFGPEVPVLSRVTQGCQPVGPQRTITRAEGNYLVTLDKARALDCVLEDLGLSLDIPDPELRNE
LAQTLAGLIAADEDVSAKPGQFGTNTEVRHLLGVGRQSGVLVVAEQIAAGMKLAFCKRNAEAAKHDLLRIVGEVRAQAEA
AGGIRGALYISCSGRGGPHFGHRNAEFQMVSEALGPVPLIGFFAGGEIARHHLYGYTGVLTVFTGAA
>Mature_386_residues
SKFICAHAGDAKWEIALGSCWGQVRFQLQNAPKPNLGWCYLTDHYTQAAGNIMEALREHMPGVHWVGTVGVGVGAEGVEY
FDEPAMVLMLADLPPDSFKLFSSPKPLQALPEAGSNGFEAFTALVHADGGSADLPIQLKDLSGKTTTGYLFGGLSSARNQ
PLCFADEVFLGGLSGVAFGPEVPVLSRVTQGCQPVGPQRTITRAEGNYLVTLDKARALDCVLEDLGLSLDIPDPELRNEL
AQTLAGLIAADEDVSAKPGQFGTNTEVRHLLGVGRQSGVLVVAEQIAAGMKLAFCKRNAEAAKHDLLRIVGEVRAQAEAA
GGIRGALYISCSGRGGPHFGHRNAEFQMVSEALGPVPLIGFFAGGEIARHHLYGYTGVLTVFTGAA

Specific function: Unknown

COG id: COG4398

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv0628c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019494
- InterPro:   IPR013702
- InterPro:   IPR016741 [H]

Pfam domain/function: PF08495 FIST; PF10442 FIST_C [H]

EC number: NA

Molecular weight: Translated: 40883; Mature: 40752

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFICAHAGDAKWEIALGSCWGQVRFQLQNAPKPNLGWCYLTDHYTQAAGNIMEALREH
CCCEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHH
MPGVHWVGTVGVGVGAEGVEYFDEPAMVLMLADLPPDSFKLFSSPKPLQALPEAGSNGFE
CCCEEEEEEECCCCCCCCHHHHCCCEEEEEEECCCCCCHHHCCCCCCHHHCCCCCCCHHH
AFTALVHADGGSADLPIQLKDLSGKTTTGYLFGGLSSARNQPLCFADEVFLGGLSGVAFG
HEEEEEECCCCCCCCCEEEECCCCCCEEEEEEECHHHCCCCCCEEEHHHHHCCCCCCCCC
PEVPVLSRVTQGCQPVGPQRTITRAEGNYLVTLDKARALDCVLEDLGLSLDIPDPELRNE
CCCHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHCCCEECCCCHHHHHH
LAQTLAGLIAADEDVSAKPGQFGTNTEVRHLLGVGRQSGVLVVAEQIAAGMKLAFCKRNA
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHCCCEEEEHHCCH
EAAKHDLLRIVGEVRAQAEAAGGIRGALYISCSGRGGPHFGHRNAEFQMVSEALGPVPLI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEE
GFFAGGEIARHHLYGYTGVLTVFTGAA
EEECCCHHHHHHHHHHHEEEHEEECCC
>Mature Secondary Structure 
SKFICAHAGDAKWEIALGSCWGQVRFQLQNAPKPNLGWCYLTDHYTQAAGNIMEALREH
CCEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHH
MPGVHWVGTVGVGVGAEGVEYFDEPAMVLMLADLPPDSFKLFSSPKPLQALPEAGSNGFE
CCCEEEEEEECCCCCCCCHHHHCCCEEEEEEECCCCCCHHHCCCCCCHHHCCCCCCCHHH
AFTALVHADGGSADLPIQLKDLSGKTTTGYLFGGLSSARNQPLCFADEVFLGGLSGVAFG
HEEEEEECCCCCCCCCEEEECCCCCCEEEEEEECHHHCCCCCCEEEHHHHHCCCCCCCCC
PEVPVLSRVTQGCQPVGPQRTITRAEGNYLVTLDKARALDCVLEDLGLSLDIPDPELRNE
CCCHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHCCCEECCCCHHHHHH
LAQTLAGLIAADEDVSAKPGQFGTNTEVRHLLGVGRQSGVLVVAEQIAAGMKLAFCKRNA
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHCCCEEEEHHCCH
EAAKHDLLRIVGEVRAQAEAAGGIRGALYISCSGRGGPHFGHRNAEFQMVSEALGPVPLI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEE
GFFAGGEIARHHLYGYTGVLTVFTGAA
EEECCCHHHHHHHHHHHEEEHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]