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The map label for this gene is 154246818

Identifier: 154246818

GI number: 154246818

Start: 3205233

End: 3205514

Strand: Direct

Name: 154246818

Synonym: Xaut_2880

Alternate gene names: NA

Gene position: 3205233-3205514 (Clockwise)

Preceding gene: 154246817

Following gene: 154246819

Centisome position: 60.37

GC content: 71.28

Gene sequence:

>282_bases
ATGGCGAGCCTGACCGACAGCGTCGGCGACGTGCCAGGCTTCGCCGTCCCGGTCCATCGGGCGCTCACCGAGCACATCCT
GCTCGGCGGCGCGCCGCGCTCCATCGCGATCCTCAACGGCACGCTGGCGGCGGCGCTCGGCCTTGGCCTGCGGCTCTGGC
TGGTCGGTCTCGGGCTCTGGGCGATCGGGCATTTCGCGGCGGTGTGGGCGGCCAAACGCGATCCACAATTCGTCGACGTG
GTGCGCCGTCACCTGCGCATCCCCGGCCATCTAAGCGCGTGA

Upstream 100 bases:

>100_bases
CGCGGAAGCTGATCCAGATCGTCTTCGGCCTGTCGATCGCCTTCGCCGCGTCGAGCTTCTTCCTGTCCTTCTTCTCCTTC
GGCGGCGGAGCGCTCGTCTG

Downstream 100 bases:

>100_bases
GGCCCCGATGATGCACCTTGCCGAATATCGCCGAACCTCAACCCGTCTCGCGGACTTCCTGCCCTGGGCCGCGCTCGTCG
GCGAGGGCATCGTCCTCAAC

Product: conjugal transfer protein TrbB

Products: NA

Alternate protein names: Conjugal Transfer Protein TrbD; Conjugal Transfer Protein; Type IV Secretory Pathway TrbD Component; Type IV Secretory Pathway VirB3 Family Protein

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MASLTDSVGDVPGFAVPVHRALTEHILLGGAPRSIAILNGTLAAALGLGLRLWLVGLGLWAIGHFAAVWAAKRDPQFVDV
VRRHLRIPGHLSA

Sequences:

>Translated_93_residues
MASLTDSVGDVPGFAVPVHRALTEHILLGGAPRSIAILNGTLAAALGLGLRLWLVGLGLWAIGHFAAVWAAKRDPQFVDV
VRRHLRIPGHLSA
>Mature_92_residues
ASLTDSVGDVPGFAVPVHRALTEHILLGGAPRSIAILNGTLAAALGLGLRLWLVGLGLWAIGHFAAVWAAKRDPQFVDVV
RRHLRIPGHLSA

Specific function: Unknown

COG id: COG5268

COG function: function code NU; Type IV secretory pathway, TrbD component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9804; Mature: 9672

Theoretical pI: Translated: 11.77; Mature: 11.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLTDSVGDVPGFAVPVHRALTEHILLGGAPRSIAILNGTLAAALGLGLRLWLVGLGLW
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
AIGHFAAVWAAKRDPQFVDVVRRHLRIPGHLSA
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ASLTDSVGDVPGFAVPVHRALTEHILLGGAPRSIAILNGTLAAALGLGLRLWLVGLGLW
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
AIGHFAAVWAAKRDPQFVDVVRRHLRIPGHLSA
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA