| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is estA [H]
Identifier: 154246586
GI number: 154246586
Start: 2937774
End: 2939666
Strand: Direct
Name: estA [H]
Synonym: Xaut_2645
Alternate gene names: 154246586
Gene position: 2937774-2939666 (Clockwise)
Preceding gene: 154246583
Following gene: 154246587
Centisome position: 55.34
GC content: 63.5
Gene sequence:
>1893_bases ATGGTCGGGCGTTCAGCTGTCATTCGTGCCGCAGTTCTATGGACCTCTATTGCCGCGGGCACGGGCGCTGCGCATGCGCA GCAGTTTTCGAACTTCTACGTCTTCGGCGACAGTCTGAGCGACGCGGGAACCTATTACGTGGTCATCGACGGCCAGCTCC AGTCGGTCCGGTTCACGGTGAACCCGGCGCCGGTGTGGGACATGCTGGTGGGCGAACATTACGGTCTTGGGGTCTCGCCT TATCTCGCCATCGACACAGTGACCAAGACCAGCACTGTGGTGGGCGGAAACAACTACGCCCAGGGCGGCGCCTGTGTGAA TTCGGGCTTCAACTATACCAAGTGTGTGGCCTATCCGGACAATACACTGGGTGAGACGCAGCAGCTCGAGATCTATCTCG CGTCAACCGGCGGCGTCGCCCAGCCCAATGCCCTCTATTCCATGTGGGCGGGCGCCAACGACATCTTCACCCAAGCGATC TACCTCAGCTACCAGCTGGTCAGCGAGGAGAAGGCCATCGAAAACGTGGTCGCGGCCGCCAACCAGCACGTGGAGAACAT CGCCACGCTCTCCAAGGCAGGCGCGCGCTACATCATCGTGCCGAACCTGCCGGACATCTCCAAGGCGCCGGTCACCAGTC TCCTGCCCCAGGGGCAGTTCTTCAGCGATTCCGTCAACGCCTACAATGCGACCCTGTACAACGACCTGCGCCACCTCGGC GGCTCGAACATCATCTACGTGGACGACTATGCGCTGGTGAACGAGGTCATCGCCAACCCGACCCTGTACGGCTTCACCAA CGTGACCGACAAGGCGTGCCAGCAGGATTTCGCCATCACCTGCACCACCAACACTTTGGTCGCGCCCAACGCGCAGAACG ATTATCTGTTCGCCGACGTCGTTCATCCCACGCCCGCCGGCCATGAGCTGCTGGCGCAATACATCGAATCCATCATCGAA GCGCCCGGCCTCATCGGCTTGCTGGCGGAAAGCCCCATCTATGTGGGGCGCGGCATCTACCGCACTCTCGATACCCGCAT TGGCACGGGCACGCCCAAGGGCTTCCAGCTCTATACCAACATCGATTACAGCACCTACACCCTCGACCCGACCCGCGACC ATTCCGGCTCGGACGGCAGCGCCGCCGCCGGCTATGTGGGCCTCGAATACGGCTTCGGCAACGGCATCAGCGTCGGCGCC CTCTTGAGCTATGGCAGCGGCAGCTACAATTTCAGCGCGCAGAACGGCGGCTACGACGCCGACATGTTCAACGGCACCAT CTACGCCAACGCCCGCTTCGGCGGGGCCTTCGCCCAGCTCTCGGGGACCGTGGGCTCGATCGACTACAATTCGATCAAGC GCCAGTTCCTGCTCGGCGCCGCGGTGCGCACCAACATGGGCGACACCAGCGGCACCTATTACGGCGCCCGCCTCGCCACC GGCTACGACTTCACTATGGGCCAGGCTACCGTCACTCCCCTGGCGCAGCTCACCTACCAGCAGGCGACGGTGGACGGCTA TGCGGAAACCGCCGGCAATTCCAGCTCCATGCTGTTCGGCAACCAGCTGCGCGAGCTGTTCTATGCGACCGTCGGCGGGC AGGCGAGCTACGCCTTCGTGCTGTCGGGTGTCACCGTGCGGCCGAACGTGCAGGCGACCTACAATTACGACTTCCTGAAC CAGGACCGCTCCGTCACCGCCGGCCTGCTGACGGCCCCCGTCACCTTCGCCATGCCGGTCTACCAGCCGGGCCGCTCCTG GACCAACCTTGCCGTCGGGCTCGCGCTGGAGGCGGCCAACGGCCTGACGTGCAATTTCACCCTGGGTGAGCTGCTCGGCC AGGACCAGGTGTCGAGCGCCTACGTGAACGGCGGCATCGCCTACAAGTTCTGA
Upstream 100 bases:
>100_bases GCTGTGATCTCTTCCGCGACGGGGGGATTGGGCGGTATCCTTTGCTAGTGTGCGGTAGCATGCGGCCCATTCCCAGGGTT GAATCTGGGGGGATCAACGC
Downstream 100 bases:
>100_bases AGCCGGCCGGAAGCGTCGCGGATCGTATCTTCCGCGACGTTTCCGCCGAGGCGGACGTGGGCTGGGGTGCGGCGGGCGGC GCCGCGCCCCAACGCCATTC
Product: outer membrane autotransporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 630; Mature: 630
Protein sequence:
>630_residues MVGRSAVIRAAVLWTSIAAGTGAAHAQQFSNFYVFGDSLSDAGTYYVVIDGQLQSVRFTVNPAPVWDMLVGEHYGLGVSP YLAIDTVTKTSTVVGGNNYAQGGACVNSGFNYTKCVAYPDNTLGETQQLEIYLASTGGVAQPNALYSMWAGANDIFTQAI YLSYQLVSEEKAIENVVAAANQHVENIATLSKAGARYIIVPNLPDISKAPVTSLLPQGQFFSDSVNAYNATLYNDLRHLG GSNIIYVDDYALVNEVIANPTLYGFTNVTDKACQQDFAITCTTNTLVAPNAQNDYLFADVVHPTPAGHELLAQYIESIIE APGLIGLLAESPIYVGRGIYRTLDTRIGTGTPKGFQLYTNIDYSTYTLDPTRDHSGSDGSAAAGYVGLEYGFGNGISVGA LLSYGSGSYNFSAQNGGYDADMFNGTIYANARFGGAFAQLSGTVGSIDYNSIKRQFLLGAAVRTNMGDTSGTYYGARLAT GYDFTMGQATVTPLAQLTYQQATVDGYAETAGNSSSMLFGNQLRELFYATVGGQASYAFVLSGVTVRPNVQATYNYDFLN QDRSVTAGLLTAPVTFAMPVYQPGRSWTNLAVGLALEAANGLTCNFTLGELLGQDQVSSAYVNGGIAYKF
Sequences:
>Translated_630_residues MVGRSAVIRAAVLWTSIAAGTGAAHAQQFSNFYVFGDSLSDAGTYYVVIDGQLQSVRFTVNPAPVWDMLVGEHYGLGVSP YLAIDTVTKTSTVVGGNNYAQGGACVNSGFNYTKCVAYPDNTLGETQQLEIYLASTGGVAQPNALYSMWAGANDIFTQAI YLSYQLVSEEKAIENVVAAANQHVENIATLSKAGARYIIVPNLPDISKAPVTSLLPQGQFFSDSVNAYNATLYNDLRHLG GSNIIYVDDYALVNEVIANPTLYGFTNVTDKACQQDFAITCTTNTLVAPNAQNDYLFADVVHPTPAGHELLAQYIESIIE APGLIGLLAESPIYVGRGIYRTLDTRIGTGTPKGFQLYTNIDYSTYTLDPTRDHSGSDGSAAAGYVGLEYGFGNGISVGA LLSYGSGSYNFSAQNGGYDADMFNGTIYANARFGGAFAQLSGTVGSIDYNSIKRQFLLGAAVRTNMGDTSGTYYGARLAT GYDFTMGQATVTPLAQLTYQQATVDGYAETAGNSSSMLFGNQLRELFYATVGGQASYAFVLSGVTVRPNVQATYNYDFLN QDRSVTAGLLTAPVTFAMPVYQPGRSWTNLAVGLALEAANGLTCNFTLGELLGQDQVSSAYVNGGIAYKF >Mature_630_residues MVGRSAVIRAAVLWTSIAAGTGAAHAQQFSNFYVFGDSLSDAGTYYVVIDGQLQSVRFTVNPAPVWDMLVGEHYGLGVSP YLAIDTVTKTSTVVGGNNYAQGGACVNSGFNYTKCVAYPDNTLGETQQLEIYLASTGGVAQPNALYSMWAGANDIFTQAI YLSYQLVSEEKAIENVVAAANQHVENIATLSKAGARYIIVPNLPDISKAPVTSLLPQGQFFSDSVNAYNATLYNDLRHLG GSNIIYVDDYALVNEVIANPTLYGFTNVTDKACQQDFAITCTTNTLVAPNAQNDYLFADVVHPTPAGHELLAQYIESIIE APGLIGLLAESPIYVGRGIYRTLDTRIGTGTPKGFQLYTNIDYSTYTLDPTRDHSGSDGSAAAGYVGLEYGFGNGISVGA LLSYGSGSYNFSAQNGGYDADMFNGTIYANARFGGAFAQLSGTVGSIDYNSIKRQFLLGAAVRTNMGDTSGTYYGARLAT GYDFTMGQATVTPLAQLTYQQATVDGYAETAGNSSSMLFGNQLRELFYATVGGQASYAFVLSGVTVRPNVQATYNYDFLN QDRSVTAGLLTAPVTFAMPVYQPGRSWTNLAVGLALEAANGLTCNFTLGELLGQDQVSSAYVNGGIAYKF
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR017186 - InterPro: IPR001087 - InterPro: IPR008265 - InterPro: IPR006315 [H]
Pfam domain/function: PF03797 Autotransporter; PF00657 Lipase_GDSL [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 66973; Mature: 66973
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS01098 LIPASE_GDSL_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGRSAVIRAAVLWTSIAAGTGAAHAQQFSNFYVFGDSLSDAGTYYVVIDGQLQSVRFTV CCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCCCEEEEEECCCEEEEEEEE NPAPVWDMLVGEHYGLGVSPYLAIDTVTKTSTVVGGNNYAQGGACVNSGFNYTKCVAYPD CCCCHHHHHHCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCEEECCCCCEEEEEECCC NTLGETQQLEIYLASTGGVAQPNALYSMWAGANDIFTQAIYLSYQLVSEEKAIENVVAAA CCCCCCEEEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHEEEEHHHHHHHHHHHHHHH NQHVENIATLSKAGARYIIVPNLPDISKAPVTSLLPQGQFFSDSVNAYNATLYNDLRHLG HHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC GSNIIYVDDYALVNEVIANPTLYGFTNVTDKACQQDFAITCTTNTLVAPNAQNDYLFADV CCCEEEECCHHHHHHHHCCCEEEEECCCCHHHHCCCEEEEEECCEEECCCCCCCEEEEEE VHPTPAGHELLAQYIESIIEAPGLIGLLAESPIYVGRGIYRTLDTRIGTGTPKGFQLYTN CCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECCCHHHHHHCCCCCCCCCCEEEEEE IDYSTYTLDPTRDHSGSDGSAAAGYVGLEYGFGNGISVGALLSYGSGSYNFSAQNGGYDA CCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEHEEECCCCCEEEECCCCCCCC DMFNGTIYANARFGGAFAQLSGTVGSIDYNSIKRQFLLGAAVRTNMGDTSGTYYGARLAT EECCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC GYDFTMGQATVTPLAQLTYQQATVDGYAETAGNSSSMLFGNQLRELFYATVGGQASYAFV CCCEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEHHHHHHHHHHHHCCCCCEEEEE LSGVTVRPNVQATYNYDFLNQDRSVTAGLLTAPVTFAMPVYQPGRSWTNLAVGLALEAAN EECCEECCCCEEEEEEHHCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCC GLTCNFTLGELLGQDQVSSAYVNGGIAYKF CCEEEEEHHHHCCCCHHHHHEECCCEEECC >Mature Secondary Structure MVGRSAVIRAAVLWTSIAAGTGAAHAQQFSNFYVFGDSLSDAGTYYVVIDGQLQSVRFTV CCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCCCEEEEEECCCEEEEEEEE NPAPVWDMLVGEHYGLGVSPYLAIDTVTKTSTVVGGNNYAQGGACVNSGFNYTKCVAYPD CCCCHHHHHHCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCEEECCCCCEEEEEECCC NTLGETQQLEIYLASTGGVAQPNALYSMWAGANDIFTQAIYLSYQLVSEEKAIENVVAAA CCCCCCEEEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHEEEEHHHHHHHHHHHHHHH NQHVENIATLSKAGARYIIVPNLPDISKAPVTSLLPQGQFFSDSVNAYNATLYNDLRHLG HHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC GSNIIYVDDYALVNEVIANPTLYGFTNVTDKACQQDFAITCTTNTLVAPNAQNDYLFADV CCCEEEECCHHHHHHHHCCCEEEEECCCCHHHHCCCEEEEEECCEEECCCCCCCEEEEEE VHPTPAGHELLAQYIESIIEAPGLIGLLAESPIYVGRGIYRTLDTRIGTGTPKGFQLYTN CCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECCCHHHHHHCCCCCCCCCCEEEEEE IDYSTYTLDPTRDHSGSDGSAAAGYVGLEYGFGNGISVGALLSYGSGSYNFSAQNGGYDA CCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEHEEECCCCCEEEECCCCCCCC DMFNGTIYANARFGGAFAQLSGTVGSIDYNSIKRQFLLGAAVRTNMGDTSGTYYGARLAT EECCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC GYDFTMGQATVTPLAQLTYQQATVDGYAETAGNSSSMLFGNQLRELFYATVGGQASYAFV CCCEECCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCEEHHHHHHHHHHHHCCCCCEEEEE LSGVTVRPNVQATYNYDFLNQDRSVTAGLLTAPVTFAMPVYQPGRSWTNLAVGLALEAAN EECCEECCCCEEEEEEHHCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCC GLTCNFTLGELLGQDQVSSAYVNGGIAYKF CCEEEEEHHHHCCCCHHHHHEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10559163; 10984043 [H]