| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154246567
Identifier: 154246567
GI number: 154246567
Start: 2914199
End: 2914621
Strand: Direct
Name: 154246567
Synonym: Xaut_2626
Alternate gene names: NA
Gene position: 2914199-2914621 (Clockwise)
Preceding gene: 154246561
Following gene: 154246568
Centisome position: 54.89
GC content: 67.61
Gene sequence:
>423_bases ATGAGCCAGAACCACGCCTTTCGCCTCGACCCTCGCCTGGAGGCCGACGGACCGGCAGTCGGCGACCTTCCCTTGTGTCA TGTTCGTCTCGTCGACGATGCTCGCTTCTTCTGGGTAGTGATGGTGCCGCGCCGGGCCGACATGGTGGAGATCATCGACC TGCCTTTTGCCGACCGGCTGCATCTCATTGAGGAGATCGCGGTCGTGTCGTCGGCGGTCAAGGCCAGCTCCGACTGTGCC AAGCTGAACGTGGCGGCGCTCGGCAACGTGGTGTCGCAGCTTCATCTGCACGTGGTCGGCCGCGAACCGGACGATGCCGC CTGGCCGGGGCCGGTGTTCGGCGCTGGCACCCGCGAGCCGCTTGCGGCGGCGGAGCGGGACAAGCGCCTCGCCGCCCTGC GCACCTGTCTCGCCATCCTGTAG
Upstream 100 bases:
>100_bases GGTCCGCCTTGGCGTGCGCTACAGGTAGCTGCAGGTAAAGGTCGTGGTTGTGCGGCTCCACGTCTCGCGTCATCAAGCTT GAACCCTGTGGAGTCGTTTC
Downstream 100 bases:
>100_bases AGCGCTCCGTGCCAGCCCGTCCGGTGGGTCTGCATCGACGGGGTGTTCCCATCTGGGGGGCCATGAGTGGTGCGACCTTG CCTCCGGGCCGTGCCCATGC
Product: histidine triad (HIT) protein
Products: NA
Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; Histidine Triad Domain Protein; Diadenosine Tetraphosphate Hydrolase; Histidine Triad; HIT Hydrolase; Pectate Lyase/Amb Allergen; Diadenosine Tetraphosphate; HIT Domain-Containing Protein; HIT1 Protein; HIT Family Protein; Diadenosine Tetraphosphate Hydrolase-Like Protein
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSQNHAFRLDPRLEADGPAVGDLPLCHVRLVDDARFFWVVMVPRRADMVEIIDLPFADRLHLIEEIAVVSSAVKASSDCA KLNVAALGNVVSQLHLHVVGREPDDAAWPGPVFGAGTREPLAAAERDKRLAALRTCLAIL
Sequences:
>Translated_140_residues MSQNHAFRLDPRLEADGPAVGDLPLCHVRLVDDARFFWVVMVPRRADMVEIIDLPFADRLHLIEEIAVVSSAVKASSDCA KLNVAALGNVVSQLHLHVVGREPDDAAWPGPVFGAGTREPLAAAERDKRLAALRTCLAIL >Mature_139_residues SQNHAFRLDPRLEADGPAVGDLPLCHVRLVDDARFFWVVMVPRRADMVEIIDLPFADRLHLIEEIAVVSSAVKASSDCAK LNVAALGNVVSQLHLHVVGREPDDAAWPGPVFGAGTREPLAAAERDKRLAALRTCLAIL
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15224; Mature: 15093
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNHAFRLDPRLEADGPAVGDLPLCHVRLVDDARFFWVVMVPRRADMVEIIDLPFADRL CCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCEEEEECCCCHHHH HLIEEIAVVSSAVKASSDCAKLNVAALGNVVSQLHLHVVGREPDDAAWPGPVFGAGTREP HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCC LAAAERDKRLAALRTCLAIL HHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SQNHAFRLDPRLEADGPAVGDLPLCHVRLVDDARFFWVVMVPRRADMVEIIDLPFADRL CCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCEEEEECCCCHHHH HLIEEIAVVSSAVKASSDCAKLNVAALGNVVSQLHLHVVGREPDDAAWPGPVFGAGTREP HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCC LAAAERDKRLAALRTCLAIL HHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA