Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is 154245965

Identifier: 154245965

GI number: 154245965

Start: 2280135

End: 2280461

Strand: Reverse

Name: 154245965

Synonym: Xaut_2022

Alternate gene names: NA

Gene position: 2280461-2280135 (Counterclockwise)

Preceding gene: 154245966

Following gene: 154245964

Centisome position: 42.96

GC content: 68.81

Gene sequence:

>327_bases
ATGGCGATACGGTCCCAATTGGCAGGAGCAGAGCACATGGACAAGGCTCGAACCAAGGGCACGTCGCAACGCGGGTTCGC
CGCCATGGATGCGGAGAAGCAGAAGGCCATCGCCCGCAAGGGCGGCGAAAGCGTTCCCGCCGAAAAGCGCAGCTTTTTCC
AGAATCGCGCGCTGGCGGCGGAAGCCGGCCGCAAGGGCGGGCAGAGCGTCGCCGACGAGCATCGCAGCTTCTCCCGCGAC
CGGGCTCTGGCCTCGCAGGCCGGACAGAAGGGCGGGCAGAAGAGCAGCCAGTCGGGCGGCACGCCCCCCACCGGCGGCAC
CACCTGA

Upstream 100 bases:

>100_bases
AACGGCTTGCCGAGCAAGCCCACCGGGCACCGCATTCTCAAAGGATCGGGAGACGGATCCGCCGAAACATCCGACCAGAT
CCGGTTCAAGGGGTATCGCC

Downstream 100 bases:

>100_bases
GCGCAGCCTCCGGATACCGGCGCCAGTGATGGAACCGACAGGCCCGTGGCGACGTTGAACGACATGACGAAAGGCCGAGC
TTGCGTGCGGCGCGGCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MAIRSQLAGAEHMDKARTKGTSQRGFAAMDAEKQKAIARKGGESVPAEKRSFFQNRALAAEAGRKGGQSVADEHRSFSRD
RALASQAGQKGGQKSSQSGGTPPTGGTT

Sequences:

>Translated_108_residues
MAIRSQLAGAEHMDKARTKGTSQRGFAAMDAEKQKAIARKGGESVPAEKRSFFQNRALAAEAGRKGGQSVADEHRSFSRD
RALASQAGQKGGQKSSQSGGTPPTGGTT
>Mature_107_residues
AIRSQLAGAEHMDKARTKGTSQRGFAAMDAEKQKAIARKGGESVPAEKRSFFQNRALAAEAGRKGGQSVADEHRSFSRDR
ALASQAGQKGGQKSSQSGGTPPTGGTT

Specific function: Unknown

COG id: COG3729

COG function: function code R; General stress protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11248; Mature: 11116

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRSQLAGAEHMDKARTKGTSQRGFAAMDAEKQKAIARKGGESVPAEKRSFFQNRALAA
CCCHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
EAGRKGGQSVADEHRSFSRDRALASQAGQKGGQKSSQSGGTPPTGGTT
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AIRSQLAGAEHMDKARTKGTSQRGFAAMDAEKQKAIARKGGESVPAEKRSFFQNRALAA
CCHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
EAGRKGGQSVADEHRSFSRDRALASQAGQKGGQKSSQSGGTPPTGGTT
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA