Click here to switch to the map view.

The map label for this gene is 154245942

Identifier: 154245942

GI number: 154245942

Start: 2255891

End: 2256601

Strand: Reverse

Name: 154245942

Synonym: Xaut_1999

Alternate gene names: NA

Gene position: 2256601-2255891 (Counterclockwise)

Preceding gene: 154245943

Following gene: 154245941

Centisome position: 42.51

GC content: 64.98

Gene sequence:

>711_bases
ATGCGCATGATCGCGATCCACGCTCAAACTGAACGAAAGCGGCTGGACAGATCTGTCCGCTGCGCTGAAAAACGCCGCCC
CTGGGCAAGGAAACAGCGGCTTCGCGGTCTGATCCGTCCAGATCCAGCAGTCTGCGCGACCGCAGGTGCCGCTTGCGGCA
GAAAATCCTTGTCTAGCGCTCGGATACAGGCGCTCTTCACCTCAAACGACACGCCACTTGGGGAATGCAGGCTCAATGTT
ACGGCCTTCGTCACCGCCTTTCTCGGCACCGTGGCCATGTGGTGGATCTATTTCGACACCGGATCGGAACGTGCCAGCGC
GCGCTTTGCCCATGTCGAGGACAGCGGGCACGTGGCCCGGCTGACCTACACCTACATCCACCAGATCATTGTCATCGGCA
TTGTCGGCTGCGCCGTCTCCGATGAGCTGATCCTCGCCCACCCCGACGGACATCTCTCGACGGCGGCGGCGTTCGCCATC
CTCGGCGGCCCTGCGCTCTATGTGCTGGGGTGCGGACTTTTCAAATACCCGCTCCTCCGCCGCTTTCCGCTCTCCCATCT
GGTCGGGCTCGGCCTGCTGGCGCTGCTGATCCCGTTCTCCAGCCTGTTCAGCCCGCTCGGCCTGGCCGCCGCGGGGACCG
GCGCCCTGCTGGTGGTGGCGGGCTGGGAGGTGGTCGCCCTGCGCCACATCACGCCACGGCGGGCGGACTGA

Upstream 100 bases:

>100_bases
ACGCCCGCACCATCACCTTCCAGCTGGCCGAGGTCGCTGTCACCGGCACGATGGTACGCGCCATCCTCGCCGCTATCCGC
CGATTGCGAGCGCCACCGCT

Downstream 100 bases:

>100_bases
AACCTGCCGAGACGTGGCGCGAACCCGATTGATTTCCGGCGCGCCGAGGCGCATATATCGCCAAAATCAAATCGATTAGA
ACCGGCGCGTCGGAACGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MRMIAIHAQTERKRLDRSVRCAEKRRPWARKQRLRGLIRPDPAVCATAGAACGRKSLSSARIQALFTSNDTPLGECRLNV
TAFVTAFLGTVAMWWIYFDTGSERASARFAHVEDSGHVARLTYTYIHQIIVIGIVGCAVSDELILAHPDGHLSTAAAFAI
LGGPALYVLGCGLFKYPLLRRFPLSHLVGLGLLALLIPFSSLFSPLGLAAAGTGALLVVAGWEVVALRHITPRRAD

Sequences:

>Translated_236_residues
MRMIAIHAQTERKRLDRSVRCAEKRRPWARKQRLRGLIRPDPAVCATAGAACGRKSLSSARIQALFTSNDTPLGECRLNV
TAFVTAFLGTVAMWWIYFDTGSERASARFAHVEDSGHVARLTYTYIHQIIVIGIVGCAVSDELILAHPDGHLSTAAAFAI
LGGPALYVLGCGLFKYPLLRRFPLSHLVGLGLLALLIPFSSLFSPLGLAAAGTGALLVVAGWEVVALRHITPRRAD
>Mature_236_residues
MRMIAIHAQTERKRLDRSVRCAEKRRPWARKQRLRGLIRPDPAVCATAGAACGRKSLSSARIQALFTSNDTPLGECRLNV
TAFVTAFLGTVAMWWIYFDTGSERASARFAHVEDSGHVARLTYTYIHQIIVIGIVGCAVSDELILAHPDGHLSTAAAFAI
LGGPALYVLGCGLFKYPLLRRFPLSHLVGLGLLALLIPFSSLFSPLGLAAAGTGALLVVAGWEVVALRHITPRRAD

Specific function: Unknown

COG id: COG4292

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010640 [H]

Pfam domain/function: PF06772 LtrA [H]

EC number: NA

Molecular weight: Translated: 25569; Mature: 25569

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMIAIHAQTERKRLDRSVRCAEKRRPWARKQRLRGLIRPDPAVCATAGAACGRKSLSSA
CEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHH
RIQALFTSNDTPLGECRLNVTAFVTAFLGTVAMWWIYFDTGSERASARFAHVEDSGHVAR
HEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHCEEEEECCCCCEEE
LTYTYIHQIIVIGIVGCAVSDELILAHPDGHLSTAAAFAILGGPALYVLGCGLFKYPLLR
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RFPLSHLVGLGLLALLIPFSSLFSPLGLAAAGTGALLVVAGWEVVALRHITPRRAD
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCC
>Mature Secondary Structure
MRMIAIHAQTERKRLDRSVRCAEKRRPWARKQRLRGLIRPDPAVCATAGAACGRKSLSSA
CEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHH
RIQALFTSNDTPLGECRLNVTAFVTAFLGTVAMWWIYFDTGSERASARFAHVEDSGHVAR
HEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHCEEEEECCCCCEEE
LTYTYIHQIIVIGIVGCAVSDELILAHPDGHLSTAAAFAILGGPALYVLGCGLFKYPLLR
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
RFPLSHLVGLGLLALLIPFSSLFSPLGLAAAGTGALLVVAGWEVVALRHITPRRAD
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9204561; 11481432 [H]